BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	580,965	T→G	1.4%	intergenic (+86/‑285)	RCAP_rcc00541 → / → RCAP_rcc00542	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	580,965	0	T→G	1.4%	3.1 ‑1.6 ‑0.1	366	intergenic (+86/‑285)	RCAP_rcc00541/RCAP_rcc00542	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (1/4): ref base (190/171): total (191/175)
Fisher's exact test strand distribution p-value = 1.97e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.08e-01

Only 100 of 399 total aligned reads displayed.


TCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTC  >  NC_014034/580866‑581065


tCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCt                                                                                                      <  2:1597722/101‑1 (MQ=255)


 ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa                                                                                                     <  1:4877763/101‑1 (MQ=255)


 ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa                                                                                                     <  2:6818528/101‑1 (MQ=255)


  cGCCTCGATTGATGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTAt                                                                                                    <  1:7045306/101‑1 (MQ=255)


   gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATc                                                                                                   <  1:3693634/101‑1 (MQ=255)


     cTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCAc                                                                                                 <  2:5027176/101‑1 (MQ=255)


      tCGATTGGGGCGGCCCGGGCAGGGGGCGGTGCCCCCCCTTTCGGCTGCGCCGAAATTCCCCCCCGGGATATTTGAGGCAAGATAAACGGGGGCCTATCAcc                                                                                                >  1:3905906/1‑101 (MQ=37)


       cGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCt                                                                                               <  1:5835862/101‑1 (MQ=255)


          ttGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTgg                                                                                            >  1:6060823/1‑101 (MQ=255)


           tGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGt                                                                                           >  1:1233927/1‑101 (MQ=255)


            gAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTg                                                                                          <  1:3156221/101‑1 (MQ=255)


              ggcggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCa                                                                                        <  2:6442237/101‑1 (MQ=255)


              ggcggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCa                                                                                        <  1:549206/101‑1 (MQ=255)


               gcggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCaa                                                                                       <  2:3822887/101‑1 (MQ=255)


                cggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGGAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCaaa                                                                                      >  2:2850191/1‑101 (MQ=255)


                cggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCaaa                                                                                      <  1:5293613/101‑1 (MQ=255)


                 ggcCCGGGCAGGGGGCGGTGCCCCCTCTTTCGGCTGCGCCGAAATTTACCCCCGGGATATTTGAGGCAAGATAAACGGGGGCCTATGACCTTTGTGCaaaa                                                                                     >  2:5606578/1‑100 (MQ=21)


                 ggcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAat                                                                                     >  1:4642581/1‑101 (MQ=255)


                  gcCCGGGCAGGGGGCGCCTCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAata                                                                                    <  1:6923490/101‑1 (MQ=25)


                   cccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAatat                                                                                   <  2:5124827/101‑1 (MQ=255)


                   cccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAatat                                                                                   <  2:3778492/101‑1 (MQ=255)


                   cccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAatat                                                                                   <  1:1492010/101‑1 (MQ=255)


                    ccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATc                                                                                  >  1:6270301/1‑101 (MQ=255)


                     cgtgcggggggCGCTTCCCCCTCTTTCGGCTTCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATcc                                                                                 <  2:5401593/95‑1 (MQ=21)


                     cGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATcc                                                                                 <  1:5923550/101‑1 (MQ=255)


                      gggCCGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCg                                                                                <  1:4073559/101‑1 (MQ=255)


                       ggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCgg                                                                               >  2:3210142/1‑101 (MQ=255)


                       ggCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCgg                                                                               >  1:5153076/1‑101 (MQ=255)


                         cAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCgggg                                                                             >  2:5778704/1‑101 (MQ=255)


                         cAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCgggg                                                                             >  2:6537501/1‑101 (MQ=255)


                          aGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCggggg                                                                            <  2:7001257/101‑1 (MQ=255)


                          aGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCggggg                                                                            >  1:2844342/1‑101 (MQ=255)


                            ggggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCggggggg                                                                          >  1:725369/1‑100 (MQ=255)


                             gggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTg                                                                         <  2:7088240/101‑1 (MQ=255)


                              ggCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGa                                                                        >  2:2383322/1‑101 (MQ=255)


                                 gcTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGc                                                                     >  1:2706571/1‑101 (MQ=255)


                                   tGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCg                                                                   <  1:6218052/101‑1 (MQ=255)


                                   tGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCg                                                                   >  2:6698932/1‑101 (MQ=255)


                                    gCCGCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa                                                                  <  1:6635294/101‑1 (MQ=255)


                                    gCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGa                                                                  >  1:4790972/1‑101 (MQ=255)


                                            tttCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAg                                                          >  2:1947988/1‑101 (MQ=255)


                                             ttCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgg                                                         >  2:6659112/1‑101 (MQ=255)


                                             ttCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAgg                                                         <  1:767829/101‑1 (MQ=255)


                                                  cTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCa                                                    >  2:2332169/1‑101 (MQ=255)


                                                   tGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg                                                   >  2:1011600/1‑101 (MQ=255)


                                                   tGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAg                                                   <  1:342727/101‑1 (MQ=255)


                                                    gcgcCGAAATTCCCCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCCCCTTGGTGCAAATACCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgc                                                  <  2:6060511/101‑1 (MQ=38)


                                                    gcgcCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAgc                                                  <  1:4983113/101‑1 (MQ=255)


                                                        tgAAATTCACCTCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccc                                              <  2:3332408/100‑1 (MQ=255)


                                                          aaaTTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccc                                            >  1:2130001/1‑101 (MQ=255)


                                                           aaTTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCt                                           >  2:5268371/1‑101 (MQ=255)


                                                            aTTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGGCGAGGGGGCAGCGCCCCCtt                                          >  1:5593648/1‑101 (MQ=255)


                                                            aTTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtt                                          >  2:4433174/1‑101 (MQ=255)


                                                              tCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGccccgcttc                                        >  1:3313909/1‑96 (MQ=255)


                                                              tCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt                                        <  2:3420416/101‑1 (MQ=255)


                                                              tCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCtttt                                        >  1:5718761/1‑101 (MQ=255)


                                                                aCCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTcc                                      >  2:1844263/1‑101 (MQ=255)


                                                                aCCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTcc                                      >  2:650343/1‑101 (MQ=255)


                                                                    ccGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACTTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtc                                  <  2:6950961/101‑1 (MQ=255)


                                                                    ccGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtc                                  <  1:3777183/101‑1 (MQ=255)


                                                                      gggATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtcgt                                >  2:6221625/1‑101 (MQ=255)


                                                                      gggATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCcgtcgt                                >  2:3569573/1‑101 (MQ=255)


                                                                       ggATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtg                               <  2:1428394/101‑1 (MQ=255)


                                                                       ggATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtg                               >  1:2402861/1‑101 (MQ=255)


                                                                       ggATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtg                               >  1:6477535/1‑101 (MQ=255)


                                                                        gATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCgtgt                              <  1:5655291/101‑1 (MQ=255)


                                                                         atatTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGtgtg                             <  2:760988/101‑1 (MQ=255)


                                                                          tatTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTgg                            >  2:4216908/1‑101 (MQ=255)


                                                                            tttGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGAt                          <  1:171893/101‑1 (MQ=255)


                                                                            tttGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGAt                          <  1:4206903/101‑1 (MQ=255)


                                                                             ttGAGGCAATATAAACGGGCGCCTATCGCCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc                         <  2:866112/101‑1 (MQ=37)


                                                                             ttGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc                         <  1:3528492/101‑1 (MQ=255)


                                                                             ttGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATc                         <  2:4781184/101‑1 (MQ=255)


                                                                              tGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcg                        >  1:1137151/1‑101 (MQ=255)


                                                                              tGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcg                        <  2:5901488/101‑1 (MQ=255)


                                                                               gAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATcgc                       >  2:2968722/1‑101 (MQ=255)


                                                                                  gCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCa                    >  2:1255616/1‑101 (MQ=255)


                                                                                  gCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCa                    >  2:2562792/1‑101 (MQ=255)


                                                                                   cAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa                   >  2:2629670/1‑101 (MQ=255)


                                                                                   cAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa                   <  2:2151890/101‑1 (MQ=255)


                                                                                   cAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa                   >  1:931488/1‑101 (MQ=255)


                                                                                   cAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCaa                   >  2:1768587/1‑101 (MQ=255)


                                                                                       ataaaCGGGCGCCTATCACCTTGGTGCAAATATTCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGtt               >  2:3848086/4‑101 (MQ=255)


                                                                                       ataaaCGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGtt               >  1:1574792/4‑101 (MQ=255)


                                                                                       ataaaCGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGtt               >  1:3839221/4‑101 (MQ=255)


                                                                                       ataaaCGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGtt               >  2:4524540/4‑101 (MQ=255)


                                                                                       ataaaCGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGtt               <  2:2715483/98‑1 (MQ=255)


                                                                                         aaaCGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCa             <  1:4467587/100‑1 (MQ=255)


                                                                                         aaaCGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCa             <  2:2469511/100‑1 (MQ=255)


                                                                                          aaCGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAg            >  1:5391062/1‑101 (MQ=255)


                                                                                            cGGGCGCCTATCGCCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATAGCGCAACGTTCAGGc          >  2:5198084/1‑101 (MQ=255)


                                                                                              ggCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCgg        >  1:4512862/1‑101 (MQ=255)


                                                                                               gcgcCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGa       >  2:2104987/1‑101 (MQ=255)


                                                                                                cgcCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCggct      >  2:3957494/1‑99 (MQ=255)


                                                                                                cgcCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAt      <  2:5990013/101‑1 (MQ=255)


                                                                                                  ccTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAttt    >  1:673324/1‑101 (MQ=255)


                                                                                                  ccTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAttt    <  2:228530/101‑1 (MQ=255)


                                                                                                  ccTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAttt    <  1:2180080/101‑1 (MQ=255)


                                                                                                   cTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGAtttt   <  1:1911999/101‑1 (MQ=255)


                                                                                                    tATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTtc  >  1:1779160/1‑101 (MQ=255)


TCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTGCGCCGAAATTCACCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTATCACCTTGGTGCAAATATCCGGGGGGTGAGGCCGAAAGCCGAGGGGGCAGCGCCCCCTTTTCCCGTCGTGTGGATCGCGCAACGTTCAGGCGGATTTTC  >  NC_014034/580866‑581065

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG