| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,255,986 | Δ1 bp | 4.2% | intergenic (+156/+86) | RCAP_rcc01184 → / ← RCAP_rcc01185 | CsbD family protein/methyl‑accepting chemotaxis sensory transducer |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,255,986 | 0 | G→. | 4.2% | 36.9 ‑0.5 ‑0.1 | 360 | intergenic (+156/+86) | RCAP_rcc01184/RCAP_rcc01185 | CsbD family protein/methyl‑accepting chemotaxis sensory transducer |
| Reads supporting (aligned to +/- strand): new base (9/6): ref base (175/169): total (184/176) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.01e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.69e-01 | ||||||||||
Only 100 of 385 total aligned reads displayed.
CTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAA.GAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGGCGCGCG > NC_014034/1255896‑1256085
|
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGa < 2:8416811/92‑1 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGa > 1:10552/10‑101 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGa > 1:1945397/10‑101 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGa > 2:1015481/10‑101 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGa > 1:6807052/10‑101 (MQ=255)
gccccccgtcccTGCGGGACCCCCCCCGGGATATTTCCGCCAAGGGGAAATTAGCCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGa < 2:5338921/92‑1 (MQ=21)
ccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCC.GGGGGGGGGGaa < 1:7057071/93‑1 (MQ=255)
ccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGac > 2:1065690/9‑100 (MQ=255)
cccccgtcccTGCGGGACTCCCCCCGGTATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAAc < 2:7120481/94‑1 (MQ=255)
cccccgtcccTGCGGGACTCCCCCCGGGACATTTCCGCCAAGGGGAAATGCACCCGGCGCGCGGCTTTCCCCTTGGGCCACATCT.CCC.GGGGGGGGGGagc > 2:5903819/8‑99 (MQ=18)
ccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACt < 1:4007008/95‑1 (MQ=255)
ccccgtcccCGCGGGGCCCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACt < 1:1016551/95‑1 (MQ=18)
cgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTcc < 1:5678647/98‑1 (MQ=255)
gtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTccc > 2:6983328/3‑101 (MQ=255)
gtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTccc < 1:4392950/99‑1 (MQ=255)
tcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTAGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCg < 1:6464387/100‑1 (MQ=255)
tcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCg > 1:6383014/2‑101 (MQ=255)
cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCga < 1:2979198/101‑1 (MQ=255)
cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCga > 1:1368627/1‑101 (MQ=255)
ccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCgaa > 2:3457684/1‑101 (MQ=255)
cggCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCgaa.g < 2:8885834/99‑1 (MQ=255)
gCGGGCCTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCgaa.gga < 1:60851/101‑3 (MQ=255)
gCGGGCCTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCgaa.gga < 2:3316513/101‑3 (MQ=255)
gCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCgaa.gga < 2:3141381/101‑3 (MQ=255)
cGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGaa.ggaa < 1:393757/101‑1 (MQ=255)
cGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAACGAACCCGGGGCGCGGCTTTCACCTTGGGACAAATA..CCC.CGGGGGGGGGAACTTCCCGaa.ggaaa < 1:8079263/101‑2 (MQ=21)
gggACCCCCCCCGGGATGTTTCCGCCAAGGGGAAATGGACCCGGGGCCCGGCTTTCCCCTTGGGCCAAAATT.CCC.GGGGGGGGGGAACTTCCCGaa.ggaaa < 2:7300248/101‑2 (MQ=255)
gggACCCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGaa.ggaaa < 1:2853093/101‑2 (MQ=255)
ggACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGaa.ggaaag < 1:81912/101‑3 (MQ=255)
ggACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGaa.ggaaag > 2:6315673/1‑99 (MQ=255)
ggACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGaa.ggaaag > 2:3621182/1‑99 (MQ=255)
ccccccGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAgggg > 1:4460121/1‑101 (MQ=255)
ccGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCa > 1:6681293/1‑101 (MQ=255)
gggATTATTCCGCCAAGGGGGAAAGAACCCGGGGGGGGGGTTTTCCCTTGGGTCAAATTT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAgg < 2:5559583/101‑1 (MQ=255)
ggATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAggg > 1:3227272/1‑101 (MQ=255)
ggATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAggg < 2:5657436/101‑1 (MQ=255)
gATATTTCCGCCAAGGGGAAATGAACCCGGGGGGCGGCTTTCACCTTGGGCCAAATAT.CCC..GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGcc < 1:6258708/101‑1 (MQ=38)
gATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGc < 1:2259012/101‑1 (MQ=255)
gATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTCGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGc > 2:7404560/1‑101 (MQ=255)
atatTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGcc > 1:7330890/1‑101 (MQ=255)
tatTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGacc > 2:7509409/1‑101 (MQ=255)
tttCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGccccc < 2:4715343/101‑1 (MQ=255)
tttCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGccccc > 2:9167203/1‑101 (MQ=255)
ttCCGCCAAGGGCAAATGGCCCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCt < 2:1190292/101‑1 (MQ=37)
tcggcgagggggAATTGCACCCGGGCCCCGTCTTCCCCCTTGGGCCAATTA..CCC.CGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCttt < 2:4213674/93‑1 (MQ=255)
ccGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCttt < 1:3888003/101‑1 (MQ=255)
ccGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCttt > 2:2199966/1‑101 (MQ=255)
ccGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC..GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTc < 2:3955118/101‑1 (MQ=255)
cGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTc < 2:6193964/101‑1 (MQ=255)
cAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCg < 1:2608569/101‑1 (MQ=255)
cAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCg < 1:4664270/101‑1 (MQ=255)
cAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCAAAGGAAAGAGGGGGGCGGGCCCCCCTTTCCCg > 2:6517014/1‑101 (MQ=38)
aGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGac > 2:2323743/1‑100 (MQ=255)
aGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGAt > 1:7901608/1‑101 (MQ=255)
aGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGAt < 1:4315759/101‑1 (MQ=255)
ggggAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGacc > 1:857833/1‑99 (MQ=255)
ggggAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGTTc > 2:908273/1‑101 (MQ=255)
ggAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCgg > 1:3071095/1‑101 (MQ=255)
ggAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCgg > 1:4966361/1‑101 (MQ=255)
aaaTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC..GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGc > 1:340591/1‑101 (MQ=255)
aaTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGc > 2:2785613/1‑101 (MQ=255)
aaTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGc > 1:8772093/1‑101 (MQ=255)
aaTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGc > 1:8936642/1‑101 (MQ=255)
aTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGCTCGGGGcc > 2:1256267/1‑101 (MQ=255)
tGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCg > 1:5161981/1‑101 (MQ=255)
gAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCgg > 2:4786519/1‑101 (MQ=255)
cGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCGGGTGCcg > 1:1685222/1‑101 (MQ=255)
ggCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCcgcgc > 2:8553746/1‑101 (MQ=255)
gcgGGTTTCCCCTTGGGGCAAATTT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGc < 2:6578266/101‑1 (MQ=255)
ggCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAg > 1:7745385/1‑101 (MQ=255)
tttCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgggc > 2:6109382/1‑100 (MQ=255)
tttCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGt < 2:5161812/101‑1 (MQ=255)
tttCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGt > 2:7731086/1‑101 (MQ=255)
tttCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGt > 2:6871126/1‑101 (MQ=255)
ttCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCGGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGCCGggggt > 2:5187401/1‑99 (MQ=38)
ttCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgggcc > 2:2892009/1‑99 (MQ=255)
tcccTTGGGCCAAATTT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCtt < 1:3793858/99‑1 (MQ=255)
cACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCtt > 1:5883181/1‑101 (MQ=255)
aCCTGGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTg < 2:1929005/101‑1 (MQ=255)
ccTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTgg > 1:9141541/1‑101 (MQ=255)
ccTGGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTgg < 2:8781628/101‑1 (MQ=255)
cTTGGGCCAAATAT.CCCGGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTgg < 2:72426/101‑1 (MQ=255)
cTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTCCCCGACCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGc > 1:94238/1‑101 (MQ=255)
cTTGGGCCAAATAT.CCC.GGGGGGGGGAAACTTCCCAAAGGAAAAGGGGGGGAAGGGCCCCCTTCCCCGACCGGGGCCGGGGCC.CGCGGGAGGGGCCTgggc > 1:8495463/1‑99 (MQ=255)
ttGGGGCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGcc < 1:2200028/101‑1 (MQ=255)
gggCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCgg > 2:405226/1‑101 (MQ=255)
gggACAAATAACCCC.GGGGGGGGGGACCTCCCCAAG.GAAAGGGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCgg < 1:4769412/101‑1 (MQ=255)
ggCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAAAGGGGGGCGGGGCCCCCTTTCCCGTCCGGGGCCGGGGCCGGGGGGCAGGGCCTTGGCCggc > 2:8212596/1‑100 (MQ=255)
ccAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCa > 2:4462669/1‑101 (MQ=255)
ccAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCa > 1:7487068/1‑101 (MQ=255)
ccAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCa < 1:51882/101‑1 (MQ=255)
cAAATAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGCCGGTCAg > 2:7993933/1‑101 (MQ=255)
aaaTAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAgg < 1:1256299/101‑1 (MQ=255)
aaaTAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAgg > 1:2385088/1‑101 (MQ=255)
aaaTAT.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGGCAGGGGCTTGGCCGGTCAgg > 1:3505462/1‑101 (MQ=255)
tat.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcgg < 2:1360935/101‑1 (MQ=255)
at.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAAAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCCCGGCAGGGTCTTGGCCGGGCAgggggc > 2:1537018/1‑101 (MQ=255)
at.CCC..GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGgcggcg > 1:420558/1‑101 (MQ=255)
t.CCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCCGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGgcggcg < 2:4370483/101‑1 (MQ=255)
ccc.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGgcgc > 2:5069150/1‑101 (MQ=255)
|
CTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGGAACTTCCCGAA.GAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGGCGCGCG > NC_014034/1255896‑1256085
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|