Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,395,795 | Δ1 bp | 3.5% | intergenic (+607/‑324) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,395,795 | 0 | C→. | 3.5% | 37.5 ‑1.6 ‑0.0 | 459 | intergenic (+607/‑324) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
Reads supporting (aligned to +/- strand): new base (12/4): ref base (248/195): total (260/199) | ||||||||||
Fisher's exact test strand distribution p-value = 1.98e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.14e-01 |
Only 100 of 537 total aligned reads displayed.
CGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGC > NC_014034/1395695‑1395895
|
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTg > 2:5907301/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAAcc > 1:7352713/1‑101 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca > 1:7948350/1‑100 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgc > 1:3434702/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgc > 2:2366986/1‑101 (MQ=255)
gTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 1:8644752/101‑2 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacc < 2:5751946/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.g > 1:4351223/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.g > 1:2692992/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.g > 2:5613527/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaccc < 2:5426076/101‑5 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGGACATCGCCGATCTGGGTAAGGCCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaccc > 1:1623884/1‑97 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.gcg > 1:486963/1‑101 (MQ=255)
cctcccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTg < 2:9085083/98‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTg > 1:474033/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAg < 2:1380743/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGt < 2:3973734/101‑1 (MQ=255)
gggggCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCa > 1:5693532/1‑101 (MQ=255)
ggggCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAg < 2:2846980/101‑1 (MQ=255)
ggTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGAt < 2:5234608/100‑1 (MQ=255)
gTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATa > 2:1088580/1‑101 (MQ=255)
gTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGAACGAAACCTGCG.GCGTGAGTTGCCAGTGATa > 1:651488/1‑101 (MQ=255)
tGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAg < 1:9179836/101‑1 (MQ=255)
tGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAg < 1:6314225/101‑1 (MQ=255)
ggATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGa > 1:8247196/1‑101 (MQ=255)
ggATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGa > 1:7492217/1‑101 (MQ=255)
ggATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGa < 2:3213952/101‑1 (MQ=255)
aTCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.Cg < 1:1012692/101‑1 (MQ=255)
aTCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.Cg < 1:4982254/101‑1 (MQ=255)
aTCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.Cg < 2:6872386/101‑1 (MQ=255)
cGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGcc > 2:1186394/1‑101 (MQ=255)
aaaCT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGt < 2:227190/101‑1 (MQ=255)
aaaCT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGt > 1:6140128/1‑101 (MQ=255)
aaCT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTg > 1:7138384/1‑101 (MQ=255)
cT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGa < 2:6956421/101‑1 (MQ=255)
t.GGTATTGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.c < 2:2921860/101‑1 (MQ=255)
t.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.c < 2:1572406/101‑1 (MQ=255)
ggTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.Cg > 2:1985232/1‑101 (MQ=255)
ggTATGGATCTGACGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.Cg > 2:6694096/1‑101 (MQ=255)
tATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTc > 1:2230903/1‑101 (MQ=255)
aTGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCg > 2:369108/1‑101 (MQ=255)
tGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGc > 1:5177988/1‑101 (MQ=255)
ggATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCt > 2:8225161/1‑101 (MQ=255)
gATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGGGTTGCCAGGGATAGC.CGCCGTGGA.CGTCGccc > 2:3571059/1‑99 (MQ=255)
aTCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTcc > 2:7676564/1‑101 (MQ=255)
aTCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTcc < 2:7390825/101‑1 (MQ=255)
cTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTcccc > 2:7081175/1‑101 (MQ=255)
cgcAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCcgc > 1:5636717/1‑101 (MQ=255)
cAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCgg > 2:1881350/1‑101 (MQ=255)
aaaCGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCggg > 2:4701696/1‑101 (MQ=255)
g..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGt > 1:5966633/1‑101 (MQ=255)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCgg > 2:2626653/10‑100 (MQ=0)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCgg > 1:3104804/10‑100 (MQ=0)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt > 2:8403564/10‑101 (MQ=0)
gacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTg < 2:429432/93‑1 (MQ=0)
aaGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTgg < 1:392303/101‑1 (MQ=255)
gTCTGTCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:8741910/101‑1 (MQ=255)
tCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2358964/101‑1 (MQ=255)
tCTGTCGTCGCTACCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:8074815/1‑101 (MQ=255)
cttccgatctcTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:277483/91‑1 (MQ=255)
gtcgtcGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:4241854/101‑1 (MQ=255)
gtcgtcGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:7832106/101‑1 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:3409311/1‑101 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:7956790/1‑101 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:6253555/101‑1 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:677526/1‑101 (MQ=255)
gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt > 1:3323533/1‑101 (MQ=255)
tcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGACACTg > 2:5015986/1‑101 (MQ=255)
cgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgc > 1:7774836/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGTCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTggg > 2:8138488/1‑99 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcg > 1:8361868/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGACGGTCCCCCCGCGGGCGGGTGGCTGGCAACTgcc > 2:7580363/1‑100 (MQ=37)
cTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATcagatcggaag > 2:277480/1‑91 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGcgcc > 1:5502444/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGcgccg > 2:6636144/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCgccgcc > 2:722008/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCt > 1:8786067/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCt > 1:2603916/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCt > 1:1454226/1‑101 (MQ=255)
cgcgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTAt < 1:6874812/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTAt < 1:3567342/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATc < 2:6084373/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATc < 1:6700164/101‑1 (MQ=255)
gggggCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGc > 1:1857241/1‑101 (MQ=255)
ggggCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCa > 1:243320/1‑101 (MQ=255)
gCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATcc < 2:8842488/101‑1 (MQ=255)
cGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCg > 1:1153850/1‑101 (MQ=255)
cGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCg < 2:1702010/101‑1 (MQ=255)
agTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCg < 1:2097728/100‑1 (MQ=255)
gTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg > 1:3762810/1‑101 (MQ=255)
gTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg < 1:5355878/101‑1 (MQ=255)
gTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg > 2:6403180/1‑101 (MQ=255)
tGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGt > 2:6511961/1‑101 (MQ=255)
ggATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTc > 2:4404649/1‑101 (MQ=255)
ggATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTc > 1:644436/1‑101 (MQ=255)
tCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGT.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAg < 1:6266632/101‑1 (MQ=255)
cGAACCCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgc < 1:4543372/101‑1 (MQ=255)
gAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgcg > 1:293059/1‑101 (MQ=255)
aaaCCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgcgc < 2:4827365/101‑1 (MQ=255)
aaCCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGcgcc > 1:8991156/1‑101 (MQ=255)
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CGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGGATCTGGCGCAAACGG..AAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGC > NC_014034/1395695‑1395895
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 22 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 40 ≤
ATCG
|