| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,255,985 | +G | 1.4% | intergenic (+155/+87) | RCAP_rcc01184 → / ← RCAP_rcc01185 | CsbD family protein/methyl‑accepting chemotaxis sensory transducer |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,255,985 | 1 | .→G | 1.4% | 6.0 ‑1.6 ‑0.3 | 350 | intergenic (+155/+87) | RCAP_rcc01184/RCAP_rcc01185 | CsbD family protein/methyl‑accepting chemotaxis sensory transducer |
| Reads supporting (aligned to +/- strand): new base (1/4): ref base (179/166): total (180/170) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.03e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.89e-01 | ||||||||||
Only 100 of 382 total aligned reads displayed.
GCTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAA.GAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGGCGCGC > NC_014034/1255895‑1256084
tcccccccgtcccGGCGGGGCACCCCCCGGGATATTTCCGCCAAGGGGAAATGACCCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCgggggggggg < 2:1236673/91‑1 (MQ=18)
cgccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCgggggggggg < 2:6418568/91‑1 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa > 1:6807052/10‑101 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa > 1:10552/10‑101 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa > 2:1015481/10‑101 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa > 2:2629641/10‑101 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa > 1:1945397/10‑101 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa < 1:2194748/92‑1 (MQ=255)
gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa < 2:402898/92‑1 (MQ=255)
gccccccgtcccTGCGGGACCCCCCCCGGGATATTTCCGCCAAGGGGAAATTAGCCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa < 2:5338921/92‑1 (MQ=21)
cccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGa < 2:8428913/92‑1 (MQ=255)
ccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCCGGGGGGGGGGaa < 1:7057071/93‑1 (MQ=255)
ccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGaa < 2:6553443/93‑1 (MQ=255)
cccccgtcccTGCGGGACTCCCCCCGGTATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAAc < 2:7120481/94‑1 (MQ=255)
cccccgtcccTGCGGGACTCCCCCCGGGACATTTCCGCCAAGGGGAAATGCACCCGGCGCGCGGCTTTCCCCTTGGGCCACATCT.CCCGGGGGGGGGGagc > 2:5903819/8‑99 (MQ=18)
ccccgtcccTGGGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACt < 2:7243823/95‑1 (MQ=255)
ccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCCGGGGGGGGGGAACt < 1:4007008/95‑1 (MQ=255)
ccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACt < 1:7408960/95‑1 (MQ=255)
ccccgtcccCGCGGGGCCCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCCGGGGGGGGGGAACt < 1:1016551/95‑1 (MQ=18)
cgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTcc < 1:5678647/98‑1 (MQ=255)
gtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTccc > 2:6983328/3‑101 (MQ=255)
gtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTccc > 2:2321637/3‑101 (MQ=255)
tcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTAGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCg < 1:6464387/100‑1 (MQ=255)
tcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCg > 1:6383014/2‑101 (MQ=255)
cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCga > 1:1368627/1‑101 (MQ=255)
cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCga < 1:2979198/101‑1 (MQ=255)
cggCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCgaa.g < 2:8885834/99‑1 (MQ=255)
tGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCgaa.gg < 1:8509113/101‑2 (MQ=255)
gCGGGCCTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCgaa.gga < 1:60851/101‑3 (MQ=255)
gCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCgaa.gga < 2:3885277/101‑3 (MQ=255)
gCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCgaa.gga < 2:3141381/101‑3 (MQ=255)
gCGGGACGCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCgaa.gga < 2:6603505/101‑3 (MQ=255)
cGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGaa.ggaa < 1:393757/101‑1 (MQ=255)
cGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGaa.ggaa < 1:4320733/101‑1 (MQ=255)
cGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAACGAACCCGGGGCGCGGCTTTCACCTTGGGACAAATA..CCCCGGGGGGGGGAACTTCCCGaa.ggaaa < 1:8079263/101‑2 (MQ=21)
ggtaCTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGaa.ggaaa < 2:3574434/98‑2 (MQ=255)
gggACCCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGaa.ggaaa < 1:2853093/101‑2 (MQ=255)
ggACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGaa.ggaaag < 1:81912/101‑3 (MQ=255)
tCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAggg > 1:7724441/1‑101 (MQ=255)
ccccccGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAgggg > 1:4460121/1‑101 (MQ=255)
ccGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCa > 1:6681293/1‑101 (MQ=255)
gggATTATTCCGCCAAGGGGGAAAGAACCCGGGGGGGGGGTTTTCCCTTGGGTCAAATTT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAgg < 2:5559583/101‑1 (MQ=255)
ggATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAggg < 2:5657436/101‑1 (MQ=255)
ggATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAggg > 1:3227272/1‑101 (MQ=255)
gATATTTCCGCCAAGGGGAAATGAACCCGGGGGGCGGCTTTCACCTTGGGCCAAATAT.CCC.GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGcc < 1:6258708/101‑1 (MQ=38)
gATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGc < 1:2259012/101‑1 (MQ=255)
gATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTCGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGc > 2:7404560/1‑101 (MQ=255)
atatTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGGACTTCCCGAAGGAAAGAGGGGGCAAGGGcc > 1:342315/1‑101 (MQ=25)
atatTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGcc > 1:7330890/1‑101 (MQ=255)
tatTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGacc > 2:7509409/1‑101 (MQ=255)
ttttCCCCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATTT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGcccc < 1:441854/100‑1 (MQ=255)
tttCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGccccc > 2:9167203/1‑101 (MQ=255)
ccGCCGAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCttt < 2:3401419/101‑1 (MQ=255)
ccGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCttt < 1:3888003/101‑1 (MQ=255)
cGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTc < 2:6193964/101‑1 (MQ=255)
cGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTc > 2:4123514/1‑101 (MQ=255)
gCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTcc < 1:3660223/101‑1 (MQ=255)
cAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCg < 1:2608569/101‑1 (MQ=255)
cAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCg < 1:3799686/101‑1 (MQ=255)
cAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCg < 1:4664270/101‑1 (MQ=255)
aGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGAt > 1:7901608/1‑101 (MQ=255)
tctgAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATc < 2:1060632/98‑1 (MQ=255)
ggggAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGTTc > 2:908273/1‑101 (MQ=255)
ggAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCgg > 1:4966361/1‑101 (MQ=255)
ggAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTCCCCGGTCgg > 2:1176943/1‑101 (MQ=37)
aaTGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGc > 1:8936642/1‑101 (MQ=255)
aaCCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCggg > 2:5158186/1‑100 (MQ=255)
cGGGGCGCGGCTTTCCCCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCcg < 2:445645/101‑1 (MQ=255)
cGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCGGGTGCcg > 1:1685222/1‑101 (MQ=255)
ggggCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCcgc > 2:1976799/1‑101 (MQ=255)
ggCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCcgcgc > 2:8553746/1‑101 (MQ=255)
gcgGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGGc > 2:4314045/1‑101 (MQ=255)
ggCTTTCACTTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAg < 2:3283963/101‑1 (MQ=255)
tttCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgggc > 2:6109382/1‑100 (MQ=255)
tttCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGt > 2:6871126/1‑101 (MQ=255)
tttCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGt > 2:7731086/1‑101 (MQ=255)
ttCACCTTGGGCCAAATAT.CCGGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGcggatca < 2:2890323/101‑7 (MQ=255)
ttCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCGGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGCCGggggt > 2:5187401/1‑99 (MQ=38)
tCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGGCAGGGGCt > 2:4541376/1‑101 (MQ=39)
cACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCtt > 1:5883181/1‑101 (MQ=255)
ccTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTgg > 2:4770658/1‑101 (MQ=255)
ccTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTgg > 1:9141541/1‑101 (MQ=255)
ccTGGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTgg < 2:8781628/101‑1 (MQ=255)
cTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTCCCCGACCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGc > 1:94238/1‑101 (MQ=255)
cTTGGGCCAAATAT.CCCGGGGGGGGGAAACTTCCCAAAGGAAAAGGGGGGGAAGGGCCCCCTTCCCCGACCGGGGCCGGGGCC.CGCGGGAGGGGCCTgggc > 1:8495463/1‑99 (MQ=255)
gggACAAATAACCCCGGGGGGGGGGACCTCCCCAAG.GAAAGGGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCgg < 1:4769412/101‑1 (MQ=255)
ggCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAAAGGGGGGCGGGGCCCCCTTTCCCGTCCGGGGCCGGGGCCGGGGGGCAGGGCCTTGGCCggc > 2:8212596/1‑100 (MQ=255)
ccAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCa < 1:51882/101‑1 (MQ=255)
ccAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCa < 2:1805485/101‑1 (MQ=255)
ccAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGCCTTGGCCggccg > 2:7305750/1‑98 (MQ=255)
cAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAg > 1:8718688/1‑101 (MQ=255)
cAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGCCGGTCAg > 2:5006056/1‑101 (MQ=255)
cAAATAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGGCTTGGCCGGTCAg > 2:7993933/1‑101 (MQ=255)
aaaTAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAgg > 1:2385088/1‑101 (MQ=255)
aaaTAT.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAgg < 1:1256299/101‑1 (MQ=255)
tat.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAggcgg < 2:1360935/101‑1 (MQ=255)
at.CCCGGGGGGGGGGAACTTCCCGAAGGAAAAAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCCCGGCAGGGTCTTGGCCGGGCAgggggc > 2:1537018/1‑101 (MQ=255)
at.CCC.GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGgcggcg > 1:420558/1‑101 (MQ=255)
t.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGgcggcg > 1:304645/1‑101 (MQ=255)
t.CCCGGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGgcggcg < 1:5168438/101‑1 (MQ=255)
GCTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACCTTGGGCCAAATAT.CCCGGGGGGGGGGAACTTCCCGAA.GAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTCTTGGCCGGTCAGGCGGCGCGC > NC_014034/1255895‑1256084
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|