BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,396,961	+G	13.5%	coding (843/1578 nt)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,396,961	1	.→G	13.5%	307.8 ‑1.1 ‑2.0	689	coding (843/1578 nt)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (39/54): ref base (284/312): total (323/366)
Fisher's exact test strand distribution p-value = 3.17e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.11e-02

Only 100 of 728 total aligned reads displayed.


TCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCG  >  NC_014034/1396861‑1397061


   aaaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCT.GC.CGCA.TCGGCT.TCCGC.CTg                                                                                                      >  1:7241645/1‑101 (MQ=255)


      ccGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..Cgg                                                                                                 >  2:1022596/1‑100 (MQ=255)


           ccAGAGATAGACCGCGCGGACCTCCTCAGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCg                                                                                           <  2:4875917/101‑1 (MQ=255)


                 aTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTcccc                                                                                     >  1:9186436/1‑101 (MQ=255)


                      ccGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCcgcg                                                                                >  2:798999/1‑101 (MQ=255)


                          gcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCggggg                                                                            >  2:6556613/1‑101 (MQ=255)


                           cgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGc                                                                           >  1:8714685/1‑101 (MQ=255)


                              aCCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTg                                                                        >  1:6928251/1‑101 (MQ=255)


                              aCCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTg                                                                        <  1:3977567/101‑1 (MQ=255)


                               cctcctCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTgg                                                                       <  1:7606388/101‑1 (MQ=255)


                                cccctcGGCCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                      <  2:323825/99‑1 (MQ=255)


                                 tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                                     >  1:7828909/1‑101 (MQ=255)


                                 cgcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTAT.GGCG.GC.AGTG.TCAGGT.T.TTC.CGG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                      <  1:5134978/93‑1 (MQ=2)


                                 ccctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                                     <  1:2489957/100‑1 (MQ=255)


                                  tcaacactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGAt                                                                     <  1:3232805/93‑1 (MQ=9)


                                  cctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                    >  2:8595222/1‑101 (MQ=255)


                                   ggccccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                   <  2:3416006/94‑1 (MQ=2)


                                   ctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                   <  2:7778604/101‑1 (MQ=255)


                                    ggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTAT.GGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                   >  1:8134869/6‑101 (MQ=2)


                                    ccgcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGac                                                                     >  2:2442617/6‑100 (MQ=2)


                                     cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                 <  2:3042734/101‑1 (MQ=255)


                                     cAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                 >  2:8979334/1‑101 (MQ=255)


                                      cccggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                <  1:6385087/97‑1 (MQ=2)


                                      cactgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                 >  2:7072468/5‑101 (MQ=9)


                                       tgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTAT.GGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                >  1:8822366/3‑101 (MQ=2)


                                       gACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                               <  2:1626215/101‑1 (MQ=255)


                                        cggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                                              >  2:4495934/3‑100 (MQ=2)


                                         tgTCGCTCCCCCCGCGGGGGCGTGGGTCGGAAC..GCTG.G.GGCGCGC.CGCG.CCGGGTCTTTTT.CTG..CGCG.GTCGCTCCCCCCCCGGGGGCGCGGGTCGAAAcc                                                              >  2:2855580/2‑100 (MQ=2)


                                         tgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                                              >  1:2773859/2‑100 (MQ=9)


                                         cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                             <  1:5923102/101‑1 (MQ=255)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGTAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActac                                                            <  1:1752065/101‑4 (MQ=2)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                               >  1:1968494/1‑101 (MQ=2)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                               >  2:1458588/1‑101 (MQ=2)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                               <  1:5325900/101‑1 (MQ=2)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTAT.GGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAAccc                                                             >  2:8765360/1‑99 (MQ=2)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTAT.GGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaaacc                                                             >  2:3330347/1‑98 (MQ=2)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc                                                            >  1:4988368/1‑101 (MQ=255)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActac                                                            <  1:2093368/101‑4 (MQ=2)


                                          gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActac                                                            <  2:5950203/101‑4 (MQ=2)


                                           tctccccccccGCGGTGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCa                                                           <  2:5160511/96‑1 (MQ=255)


                                           tCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                              >  2:1118734/1‑101 (MQ=2)


                                           tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGGTCGAAActaca                                                           >  2:7627398/1‑97 (MQ=2)


                                            cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACac                                                             <  2:5717482/101‑2 (MQ=2)


                                            cGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcgg                                                           >  1:4689965/1‑97 (MQ=9)


                                            cGCTCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcgg                                                           <  2:4967170/101‑5 (MQ=9)


                                             gCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacacc                                                         >  2:3988695/1‑95 (MQ=2)


                                             gCTCCCCCCGCGGGGGCGTGGATCGAAACA..ACT.G.ACC...C.GGCA.ACGGCC.TATGCGCTGGACGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActacacc                                                         >  2:4759025/1‑95 (MQ=2)


                                             ccTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACacc                                                            <  2:9108524/100‑3 (MQ=2)


                                              cTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTAT.GGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgccc                                                         >  1:8977033/1‑95 (MQ=2)


                                               tCCCCCCGCGGGGGCGTGGATCGAAACATGGCTAT.GGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcccgccac                                                        >  1:8429512/1‑94 (MQ=2)


                                               tCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                                        >  1:2320115/1‑94 (MQ=9)


                                               tCCCCCCGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcct                                                        >  2:7237235/1‑94 (MQ=9)


                                               cccccccGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtc                                                       <  2:359820/100‑1 (MQ=255)


                                                ccccccGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                                         >  1:5499544/1‑99 (MQ=2)


                                                ccccccGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctc                                                       <  2:8227756/101‑9 (MQ=9)


                                                ccccccGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctc                                                       <  1:2698517/101‑9 (MQ=9)


                                                ccccccGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctc                                                       >  1:3481028/1‑93 (MQ=9)


                                                 cccccGCGGGGGCGTGGATCGAAACT.GCGT.G.CGCG.CCATGAATTCATCG.AGCGC.CAT..CGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatg                                                        <  1:6156805/101‑4 (MQ=2)


                                                 cccccGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgt                                                     <  1:4250481/101‑1 (MQ=255)


                                                 cccccGCGGGGGCGTGGATCGAAAC..GCTG.G.CGCGCGC.CGCG.CCGGATCTTTGT.CTG..CGCG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAActcggcctcg                                                      <  2:2632551/101‑10 (MQ=9)


                                                  ccccGCGGGGGCGTGGATCGAAACATGGCT.GTGGCG.GC.AGTG.TCAGGT.T.TTC.CAG..CGGC.GTCGCCCCCCCCGCGGGGGCGTGGATCGAAAcccgccacgtc                                                     <  1:3793565/101‑11 (MQ=2)


                                                  ccccGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtc                                                    <  1:6785191/101‑1 (MQ=255)


                                                   cccGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtcg                                                   <  1:4468189/101‑1 (MQ=255)


                                                   cccGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtcg                                                   >  1:4839196/1‑101 (MQ=255)


                                                   cccGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcgtcg                                                   <  2:7522851/101‑1 (MQ=255)


                                                       ggggggCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTgg                                               <  2:5425690/100‑1 (MQ=255)


                                                          gggCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCa                                            <  1:1013270/101‑1 (MQ=255)


                                                          gggCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCa                                            <  1:6617211/101‑1 (MQ=255)


                                                            gCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGc                                          <  1:335921/101‑1 (MQ=255)


                                                             cGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGcc                                         >  1:5609138/1‑101 (MQ=255)


                                                               tGGATCGAAACA.GCCT.G.CGCG.GC.C.CA.TCGGCT.TCCGC.CCG..CCGG.GGCGCCCCCCCCGCGGGGGCGGGGGTCGGAACATCAGCTCGGCGTTGGGCAGCCCGa                                      >  1:1538122/1‑101 (MQ=255)


                                                                ggATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGGCAGCCGGa                                      >  2:6696335/1‑101 (MQ=255)


                                                                 gATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGAc                                     >  2:2279415/1‑101 (MQ=255)


                                                                  aTCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACg                                    <  2:7270999/101‑1 (MQ=255)


                                                                    cGAACCA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGAt                                  <  2:2055873/101‑1 (MQ=255)


                                                                    cGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGAt                                  >  1:1848443/1‑101 (MQ=255)


                                                                     gAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATg                                 <  1:8525972/101‑1 (MQ=255)


                                                                     gAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCCTTGGTCAGGCGGACGCTg                                 >  2:3744144/1‑101 (MQ=255)


                                                                      aaaCA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TTCGC.CTG..CGTG.GTTGCTGCCCTCGCGGGGGCGTGGATCTAATCATCCCCTCGTCCTTGTTCAGCCgtggcaggt                                >  2:6914627/1‑93 (MQ=255)


                                                                        aCA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTcc                              <  2:6120379/101‑1 (MQ=255)


                                                                         cA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCg                             >  1:6233549/1‑101 (MQ=255)


                                                                          a.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGt                            <  1:8023462/101‑1 (MQ=255)


                                                                            gCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTc                           <  1:4118707/101‑1 (MQ=255)


                                                                            gCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTc                           <  2:6358142/101‑1 (MQ=255)


                                                                              cT.G.CGCG.GC.CGCC.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAGATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGc                         >  1:6550690/1‑101 (MQ=255)


                                                                                     cg.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTcccc                    >  1:1227867/1‑101 (MQ=255)


                                                                                      g.gC.CTCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCGCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTccccc                   <  2:5822542/101‑1 (MQ=255)


                                                                                        gC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTcccccc                  >  1:7392731/1‑101 (MQ=255)


                                                                                         c.cGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcg                 <  2:1846291/101‑1 (MQ=255)


                                                                                         c.cGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcg                 <  2:7418490/101‑1 (MQ=255)


                                                                                            gCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCcgcg               <  1:7139032/101‑1 (MQ=255)


                                                                                                tCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCgggg            <  1:3057276/101‑1 (MQ=255)


                                                                                                   gCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCg         >  1:8246480/1‑101 (MQ=255)


                                                                                                    cT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGt        <  2:4271472/101‑1 (MQ=255)


                                                                                                     t.tCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTg       >  2:8330087/1‑101 (MQ=255)


                                                                                                       tCCGG.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTgg      <  2:1328537/101‑1 (MQ=255)


                                                                                                       tCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTgg      >  1:575817/1‑101 (MQ=255)


                                                                                                       tCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTgg      >  2:410356/1‑101 (MQ=255)


                                                                                                          gC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATc   <  1:1651505/101‑1 (MQ=255)


                                                                                                          cc.cTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGTATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATc   <  2:6773257/100‑1 (MQ=255)


TCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.G.CGCG.GC.CGCA.TCGGCT.TCCGC.CTG..CGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCGTCGTTGGTCAGCCGGACGATGTCCGTCGCTCCCCCCGCGGGGGCGTGGATCG  >  NC_014034/1396861‑1397061

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG