| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,374 | +G | 2.4% | intergenic (‑170/‑135) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,374 | 2 | .→G | 2.4% | 23.1 ‑1.5 ‑0.8 | 466 | intergenic (‑170/‑135) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (8/3): ref base (233/222): total (241/225) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.24e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.72e-01 | ||||||||||
Only 100 of 503 total aligned reads displayed.
GCTCTGCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGC > NC_014034/2249275‑2249473
|
ctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc > 1:7867319/5‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag < 1:8949544/99‑1 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:5875644/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 2:6671115/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:2691587/3‑101 (MQ=255)
ccccgGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCG.AAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag < 1:3658952/100‑1 (MQ=255)
ccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag < 2:8198707/101‑1 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:2094068/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 1:3172563/1‑101 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:9139202/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGCTGAA...GGGG..GGCTTTCATCTTGCCGCAAATATCCCGGGGGGGGAA.TGGCGCC..GCCCGAgggggg > 1:2967431/1‑101 (MQ=37)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg > 2:4126638/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:4053185/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.c > 1:1388815/1‑101 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.Ca < 2:1900228/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg > 2:8447664/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg > 1:4716201/1‑101 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.c < 2:5204198/101‑1 (MQ=255)
gtGACGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.c < 1:2906103/101‑1 (MQ=255)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg > 1:7916613/7‑101 (MQ=21)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.c > 1:4364353/6‑101 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATACCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.c < 1:6454527/96‑1 (MQ=18)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.cg.c > 2:5365/1‑101 (MQ=255)
ctggACT.CCCCCGGAATATTTGAGGCGAGATGAA...GGGG..GGCGTTCATCTTGCCGAATATATCCCGGGTGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAT.CG.ccc < 2:1110049/99‑1 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.c < 1:226673/101‑1 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.c < 2:7563904/101‑1 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAGGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.cc < 2:1779782/101‑1 (MQ=255)
gACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.ccc > 2:3306408/1‑100 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.ccctt < 2:1484146/101‑4 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.ccctt < 2:2795914/101‑4 (MQ=255)
cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.ccctt < 1:2422173/101‑4 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.cccttc < 2:1281900/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc.cccttc < 1:771031/101‑5 (MQ=255)
cccccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCC.CCt < 1:1892457/101‑1 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCC.CCtgccc > 1:7636372/1‑97 (MQ=0)
gATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCgcgggcgg > 1:5603106/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGcc > 2:3705213/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGcc > 2:5563506/1‑101 (MQ=255)
tttGGGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCcgc < 2:5820082/101‑1 (MQ=255)
tttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCcgc < 2:1360245/101‑1 (MQ=255)
gAGGCAAGATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGAc < 2:9023061/101‑1 (MQ=37)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGAc < 2:2203705/101‑1 (MQ=255)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGAc > 1:8079337/1‑101 (MQ=255)
aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGAcg > 2:6290077/1‑101 (MQ=255)
cAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGAcgcgc > 2:2054705/1‑101 (MQ=255)
cAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGAcgcgc < 2:3021647/101‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:8915125/101‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:3299225/1‑101 (MQ=255)
ga...GGGG..GGCTTTCATCGTGCGGAAAATATCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCaa < 1:340630/100‑1 (MQ=37)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:4794888/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:5049705/101‑1 (MQ=255)
gaggggagtcTTTCATCGTGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:3529689/92‑1 (MQ=25)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 2:6919664/101‑1 (MQ=255)
gg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg < 1:6664534/101‑1 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAggc > 1:5012030/1‑100 (MQ=255)
ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCCCGACGCCCGCCGCAACAGGTc > 1:104517/1‑101 (MQ=25)
gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCg > 2:4727696/1‑101 (MQ=255)
cTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGt < 2:2398581/101‑1 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc < 1:5708370/101‑1 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt > 1:7422879/1‑101 (MQ=255)
tCTGGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt < 1:5350800/101‑1 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:3901468/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:6978659/1‑101 (MQ=255)
cTTGCCAAAAATGTCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CCG.GGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt < 2:729945/101‑1 (MQ=255)
cTTACCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGTGGCCGCGACGCGAGCCGCAACAAGGCGTGCCCCtt > 1:8804130/1‑101 (MQ=25)
tGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTg < 2:7402025/101‑1 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa > 2:2530373/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 1:9195375/101‑1 (MQ=255)
gAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 2:6147952/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 2:6523545/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TAGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:999284/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 2:7906586/101‑1 (MQ=255)
aaTATCCCGGGGGGTGAA.TGTCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:7204665/101‑1 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGAGGG.CG.CCC.CTTCCGCGGG.GGGCGCGACGCGCGCCGCAACAGGTCCGGCCCCTTTGTCAttttt > 2:4449441/1‑98 (MQ=25)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:6897623/101‑1 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:168561/101‑1 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCACCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGGGCCCCTTTGTCATTGTg > 1:4225264/1‑101 (MQ=38)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGt < 2:2669662/101‑1 (MQ=255)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGt > 1:7581512/1‑101 (MQ=255)
ccGGGGGGTGAA.TGGCGTA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa > 1:5448480/1‑101 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa > 1:1193650/1‑101 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:1617854/1‑101 (MQ=255)
cGGGGGCTGAA.TGGGGAA..GCTAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 2:5507599/101‑1 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 1:3820811/101‑1 (MQ=255)
ggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 1:6292409/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt > 2:5881813/1‑101 (MQ=255)
ggcgcgccgggCGCG..CCCCGAGGGGGG.CAGCCC.CCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCa < 2:8074864/92‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa < 2:7710173/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 2:6033012/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 2:7149675/1‑101 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:2049720/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 2:8597677/101‑1 (MQ=255)
agggCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:6240183/99‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 2:4665931/1‑101 (MQ=255)
ggCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:4831057/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:1532694/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAg < 1:3533787/101‑1 (MQ=255)
cgcA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt < 1:8438038/101‑1 (MQ=255)
cA..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTgg < 2:6621588/101‑1 (MQ=255)
a..GCCAGAGGGGGG.CAG.CGCCCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGCCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc > 1:8536939/1‑101 (MQ=255)
|
GCTCTGCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCC.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGC > NC_014034/2249275‑2249473
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|