| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,330,295 | +A | 97.2% | intergenic (+270/+42) | RCAP_rcc02161 → / ← mrcA | hypothetical protein/penicillin‑binding protein 1A |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,330,295 | 4 | .→A | 97.2% | 7.4 ‑2.5 ‑0.0 | 181 | intergenic (+270/+42) | RCAP_rcc02161/mrcA | hypothetical protein/penicillin‑binding protein 1A |
| Reads supporting (aligned to +/- strand): new base (73/103): ref base (0/5): total (73/108) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.26e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.99e-01 | ||||||||||
Only 100 of 226 total aligned reads displayed.
TATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGGG....G.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCT > NC_014034/2330195‑2330395
|
tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggggg > 2:2482607/1‑101 (MQ=255)
tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggggg > 1:2095980/1‑101 (MQ=255)
tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggggg > 2:2336740/1‑101 (MQ=255)
tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggggg > 2:7635440/1‑101 (MQ=255)
tATTTGCGCAAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggggg > 2:5161235/1‑101 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc > 1:8470126/1‑100 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc < 1:8560330/101‑2 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc > 1:7439557/1‑100 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc > 2:5772727/1‑100 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc > 1:3596911/1‑100 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc > 1:2860056/1‑100 (MQ=255)
aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc > 1:2324896/1‑100 (MQ=255)
tttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcg > 1:6957028/1‑99 (MQ=255)
tttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcg > 2:7935850/1‑99 (MQ=255)
tttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcg > 1:8127029/1‑99 (MQ=255)
tGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcgga < 2:1820431/101‑5 (MQ=255)
gccccAAGAAAAAGCCCGGGCGCTCACTCGGCGCCCCGGATCACCGGCGGCCCGTGCGTCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggag < 1:4224267/98‑6 (MQ=25)
gcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagcc < 2:4441889/101‑8 (MQ=255)
gcCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagcc < 2:2701964/101‑8 (MQ=255)
ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGGCCGGGCGGCGTTGACCTGGGGCCAGAGAtgccgggggttcgggggcggagccc > 2:7804244/1‑93 (MQ=255)
ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccc > 2:8401778/1‑93 (MQ=255)
ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccc > 2:4798908/1‑93 (MQ=255)
ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccgggggcggagccc > 1:400534/1‑93 (MQ=255)
cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagcccc > 1:4819191/1‑92 (MQ=38)
aaGAAGAAGCCGGGGCGCGCATGCGGAGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccccc < 2:5967285/101‑11 (MQ=37)
aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccccc > 2:2394205/1‑91 (MQ=38)
aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGGG....G.....cggagccccc < 1:5287433/101‑10 (MQ=38)
aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGGG....G.....cggagccccc < 1:3005626/101‑10 (MQ=38)
gCCGGGGCGCGCATGCGGGGCCCCGGATCACCCGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCTGGGGGCGGAG.....CCCCCGGCGGGTc < 2:6761554/101‑1 (MQ=25)
ccGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCg < 2:2659653/101‑1 (MQ=25)
ggggCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGcc > 1:4720193/1‑101 (MQ=25)
gggCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTGGccc > 2:4171572/1‑100 (MQ=21)
gggCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCg < 2:2870794/101‑1 (MQ=25)
gcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCAt < 1:6432680/101‑1 (MQ=25)
gaaTGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCAt < 2:112705/99‑1 (MQ=21)
cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATc < 2:8529420/101‑1 (MQ=25)
cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATc < 1:7147546/101‑1 (MQ=25)
cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATc < 1:4130349/101‑1 (MQ=25)
aTGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCg < 1:3653335/101‑1 (MQ=25)
cGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGGGCCGGGGCGTCGccc > 1:5691122/1‑100 (MQ=18)
cGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGGgggggccccc > 1:2712713/1‑93 (MQ=18)
cGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCggggcggccc > 1:6699008/1‑93 (MQ=18)
ggggCCCCGGATCCCCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTc < 2:3829635/101‑1 (MQ=21)
ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTc < 2:1704105/101‑1 (MQ=25)
ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTc < 1:8053770/101‑1 (MQ=25)
gggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGGggggccgccccc > 2:2002/1‑91 (MQ=18)
gggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCgggggcgccccc > 1:61445/1‑91 (MQ=18)
ggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCgg < 1:7490031/101‑1 (MQ=25)
ggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCCCgg > 2:3217607/1‑101 (MQ=21)
gCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGc < 2:3507814/101‑1 (MQ=25)
gCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGc < 2:4392016/101‑1 (MQ=25)
cccGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGa < 1:926237/101‑1 (MQ=25)
ggATCCCCGGCGGCCCGGGCGGCTTTCCCCGGGGGCCAAAGATCCGGGGGGGCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAAt < 1:2482680/101‑1 (MQ=18)
ggATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAAt < 2:1226896/101‑1 (MQ=25)
gATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGGGCCGCGGCCTCGCCTCGGCGCAATc > 2:6856516/1‑101 (MQ=18)
gATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGGGCCGCGGCACCGCCCCgcggcaaac > 2:7264789/1‑93 (MQ=12)
aTCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGGGGGAGCGCCTCGGCGgaacac > 2:7143880/1‑98 (MQ=16)
cACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCt < 1:8302926/101‑1 (MQ=25)
cACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCt < 1:985814/101‑1 (MQ=25)
cccGGCGGCCGGGGCGGCTTGCACCTGGGGCCAAAGACCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCtt < 2:3596803/100‑1 (MQ=18)
cccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCtt < 2:4576379/100‑1 (MQ=21)
aCCGGCGGCCCGGGCGGCTTTCACCGGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCtt < 2:8881612/101‑1 (MQ=21)
ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTa < 1:5161404/101‑1 (MQ=25)
ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTa < 2:6209757/101‑1 (MQ=25)
cggcggCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCCCGGGCTCGCCCCCGCGGAAAcccctct > 2:7413751/1‑97 (MQ=9)
ggcggcCGGGGCGGCTTCCACCTGGGGCCAAAGATCCGGGGGGTCGGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGt < 2:3193760/101‑1 (MQ=21)
ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGGGGCGGGGGAACGCCCCCGCGAAAACCCCTact > 1:7911744/1‑99 (MQ=9)
ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCGGCACCGCCGCCGCGGAATCCCTTAGt > 2:2049085/1‑101 (MQ=12)
cggcCCGGGCGGCTTTCCCCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTaa < 2:856205/101‑1 (MQ=21)
cggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTaa < 1:8831620/101‑1 (MQ=25)
gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAg < 1:595603/101‑1 (MQ=25)
tccGGGCGGTTTTCCCCGGGGGCCAAAGACCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGa < 1:4977675/100‑1 (MQ=18)
cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAcc < 1:8646973/101‑1 (MQ=25)
cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCCCGGCGGAAACCCCTAGTAAAGaac > 1:1506806/1‑99 (MQ=16)
gggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccg < 1:7326813/101‑1 (MQ=25)
gcggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccgcc < 2:5034124/101‑1 (MQ=25)
gcgccTTCCCCCGGGGGCAAAAGA.CCCGGGGGGCCCGGGG....GCGGACCCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccgcc < 1:3250187/101‑1 (MQ=16)
cggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccgccc < 2:2095918/101‑1 (MQ=25)
ggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGGAGCGCCCCGCCGGAATCCCTTTGTTAAGaaacgccc > 1:2001755/1‑94 (MQ=9)
ggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCCGGGGCTCGCCCCCGCGAAAACCCTTTGTAAAAAacgcccg > 1:762407/1‑101 (MQ=2)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGGAGCGCCCCCGCGGAAACCCCTTGTAAAAAccccccgccg > 2:6449457/1‑99 (MQ=2)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCGTCGCCCCCGCGGAATCCCCTAGTAAAAAACGCCcccgc > 1:6304493/1‑100 (MQ=9)
tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCCCGGCGAAAACCCCTAGTAAAGACCGCCCGCgg > 1:1605223/1‑101 (MQ=18)
tcgccgggggCCAAAGATCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGAc < 1:5600589/95‑1 (MQ=21)
cacgcTGGTGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGGCTCGCCTCGGCGGAATCCCCTTGTAAAAAACGCCCCCgggc > 2:4054157/5‑99 (MQ=2)
aCCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCGGGATCGCCCCCGCGGAAACCCCTCGGAAAAACCGCCCCCCGACAg > 2:1036639/1‑101 (MQ=2)
ccTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGGCGGGGGCACGCCTCGGCGAAAAACCTTTGTAAAAAACGCCCGCGGGCAgg > 2:4871917/1‑101 (MQ=2)
ccTGGGGCCAAAGACCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAgg < 1:3357333/101‑1 (MQ=21)
cTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGGGGGATCGCCCCGGCGGAAAACCCTAGTAAAAACCGCCCGCGGGGAggg > 1:5080610/1‑101 (MQ=2)
cTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCCCCGCGAAAACCCCTCGTAAAGAACGCCCCCGGACAggg > 2:5571052/1‑101 (MQ=12)
tGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGGGGGATCGCCCCCGCGGAAACCCTTTGTAAAAACCGCCCCCCGGCAgggg > 1:1030172/1‑100 (MQ=2)
tGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGGATCGCCTCGGCGAAAACCCGTACTAAAAAACGCCCGCGGGCAcggg > 2:2542843/1‑100 (MQ=9)
ggggCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGGGCCGGGGGATCGCCTCCGCGGAATCCCCTCGTAAAAAACGCCCGCCGACCggggg > 1:547219/1‑99 (MQ=2)
gggCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAACGCCCGCGGACAGGGGTc > 2:3053542/1‑101 (MQ=18)
ggCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCCAGGGATCGCCTCGGCGAAAACCCTTCGTAAAGAACCCCCCCGGCCACGGGTcc > 2:3687904/1‑101 (MQ=2)
gCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCg < 1:3913409/101‑1 (MQ=21)
cAAAGATCCCGGGGGTCGGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGaa < 2:7300537/101‑1 (MQ=21)
aaaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCTGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAg < 1:4562716/101‑1 (MQ=21)
aGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCCGGGCATCGCCCCGGGGAAAACCCTTTGTAAAAACCGCCCGCGGGCAGGGAACCGaaagg > 1:1156002/1‑98 (MQ=9)
g....g.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCt < 1:3392321/101‑1 (MQ=255)
|
TATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGGG....G.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCT > NC_014034/2330195‑2330395
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|