| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 235,595 | +C | 98.5% | intergenic (+24/+187) | RCAP_rcc00200 → / ← RCAP_rcc00201 | MarR family transcriptional regulator/adenine‑specific DNA‑methyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 235,595 | 2 | .→C | 98.5% | 4.1 0.0 ‑0.0 | 260 | intergenic (+24/+187) | RCAP_rcc00200/RCAP_rcc00201 | MarR family transcriptional regulator/adenine‑specific DNA‑methyltransferase |
| Reads supporting (aligned to +/- strand): new base (6/250): ref base (0/4): total (6/254) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.77e-01 | ||||||||||
Only 100 of 294 total aligned reads displayed.
GCGACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..CCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGC > NC_014034/235495‑235686
|
gcgACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCg < 2:4969696/101‑1 (MQ=255)
gACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..cc < 1:4644557/101‑1 (MQ=255)
gACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..cc < 2:893577/101‑1 (MQ=255)
aTCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..ccccc < 2:2380880/101‑2 (MQ=255)
tCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..cccccc < 2:7544880/101‑3 (MQ=255)
cGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..ccccccg < 2:1501334/101‑4 (MQ=255)
cGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..ccccccg < 1:5464110/101‑4 (MQ=255)
cgcCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..ccccccgcac < 1:6097030/101‑7 (MQ=255)
gcCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..ccccccgcacc < 1:8605486/101‑8 (MQ=255)
gACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCAccccc < 2:2497425/101‑1 (MQ=255)
aCAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCAcccccc < 2:1557335/101‑1 (MQ=255)
aCAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCAcccccc < 2:4894734/101‑1 (MQ=255)
aCAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCAcccccc < 1:3423644/101‑1 (MQ=255)
aCAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCAcccccc < 2:7263590/101‑1 (MQ=255)
cAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCg < 1:7798501/101‑1 (MQ=255)
ggTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGc < 2:4548404/101‑1 (MQ=255)
gTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAACGGGGGGGGGTT..CGG..CCCCCCCcccccccccccg > 2:5093850/1‑95 (MQ=255)
ccGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTa < 1:4178937/101‑1 (MQ=255)
ccGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCCAGGAAAACTGAAACCGCGGGAAC.GGGGGGCGTT..CCC..CCCCCCCcccccccacccgcg > 2:2984209/1‑93 (MQ=255)
cgcgCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGTGTAt < 1:969815/101‑1 (MQ=255)
cgcgCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTAt < 1:1506901/101‑1 (MQ=255)
gcgcCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTAtt < 2:7105436/101‑1 (MQ=255)
gcgcCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTAtt < 1:8980594/101‑1 (MQ=255)
gcgcCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTAtt < 2:3461123/101‑1 (MQ=255)
cgccgcCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTAttt < 1:3139867/101‑1 (MQ=255)
cgccgcCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTAttt < 1:7679404/101‑1 (MQ=255)
cgccgcCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGCGCTTT..CCGCCCCCCGCACCCCCCGGGCGTAttt < 1:6451647/101‑1 (MQ=38)
gccgccTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTg < 2:4728069/101‑1 (MQ=255)
gccgccTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGCGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTg < 1:8254327/101‑1 (MQ=38)
gccTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCAc < 1:155930/101‑1 (MQ=255)
ttGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCaa < 1:8427976/101‑1 (MQ=255)
tGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAg < 1:3023040/101‑1 (MQ=255)
cccGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGaa < 2:6994081/101‑1 (MQ=255)
ccGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGaaa < 1:1645853/101‑1 (MQ=255)
ccGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGaaa < 1:4212440/101‑1 (MQ=255)
gTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGaaaaa < 2:1052328/101‑1 (MQ=255)
tgctgcGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAg < 1:6616930/101‑1 (MQ=255)
gctgcGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGc < 2:7856547/101‑1 (MQ=255)
gcgcGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGaa < 2:688472/101‑1 (MQ=255)
gcgcGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGaa < 2:1180865/101‑1 (MQ=255)
cgcgAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAAc < 1:6942402/101‑1 (MQ=255)
cgcgAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAAc < 1:3780636/101‑1 (MQ=255)
gcgAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACg < 1:2377194/101‑1 (MQ=255)
gAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCGCCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACggg < 1:139544/101‑1 (MQ=38)
aTTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGtt < 1:4449181/101‑1 (MQ=255)
aTTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGtt < 2:6643282/101‑1 (MQ=255)
tgcggctgcggcTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttc < 1:1340389/101‑1 (MQ=255)
tgcggctgcggcTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttc < 2:1886291/101‑1 (MQ=255)
gcggctgcggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttct < 2:7734310/101‑1 (MQ=255)
cggctgcggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttctt < 1:8018324/101‑1 (MQ=255)
cggctgcggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttctt < 1:5242585/101‑1 (MQ=255)
ggctgcggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTttcttc < 1:8768571/101‑1 (MQ=255)
gctgcggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTtcttct < 2:3947718/101‑1 (MQ=255)
gctgcggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTtcttct < 1:4272439/101‑1 (MQ=255)
tgcgtctCAAGGAAAGCTGAACCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTg < 2:4222839/101‑1 (MQ=37)
gcggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTgg < 2:1133371/101‑1 (MQ=255)
ggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGa < 1:8118287/101‑1 (MQ=255)
ggctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGa < 1:7062671/101‑1 (MQ=255)
ctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaa < 2:648467/101‑1 (MQ=255)
ctCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaa < 1:7960467/101‑1 (MQ=255)
ctCGAGGAAAGCGGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTGGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaa < 1:9149990/101‑1 (MQ=38)
cgcGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaa < 2:2229452/99‑1 (MQ=38)
cgatctgAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaa < 1:5714332/95‑1 (MQ=38)
tCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaaa < 1:2944601/101‑1 (MQ=255)
tCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaaa < 2:5318877/101‑1 (MQ=255)
cGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaaaa < 1:2815901/101‑1 (MQ=255)
cGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGaaaaa < 1:1218809/101‑1 (MQ=255)
gAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAAt < 1:1919748/101‑1 (MQ=255)
gAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAAt < 1:4363155/101‑1 (MQ=255)
aGGAACGCTGAAGCCGC.GGAAC.GGGGCGCTTT..CCGCCCCCCGCCCCCCCCGGGCGTATTTGCGCCTAGAAAAAGCGAACGGGTTTCTTCTATGTAAAAATa < 2:5893947/101‑1 (MQ=25)
aacccTGAACCCGG.GGACC.GGGGGGTTTTC.CCC..CCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGcc < 1:8848627/97‑1 (MQ=37)
aaaGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGc < 2:3105906/101‑1 (MQ=255)
aaaGCTGAAGCCGC.GGAAC.GCGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGc < 1:8826249/101‑1 (MQ=38)
cTGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCt < 2:8448584/101‑1 (MQ=255)
tGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCtt < 1:1006691/101‑1 (MQ=255)
tGAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCtt < 1:7107422/101‑1 (MQ=255)
gAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCttt < 2:8105055/101‑1 (MQ=255)
gAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCttt < 2:5971876/101‑1 (MQ=255)
gAAGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCttt < 1:7293486/101‑1 (MQ=255)
aaGCCGC.GGAAC.GGGGGGCTTTCCCCC..CCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAAAGGGTTTCTTCTTGGGAAAAATACGCCCCtttt < 1:6985665/101‑1 (MQ=38)
aaGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCtttt < 2:2592835/101‑1 (MQ=255)
aaGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCtttt < 2:2103278/101‑1 (MQ=255)
aaGCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCtttt < 1:2267942/101‑1 (MQ=255)
gCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTc < 2:3808485/101‑1 (MQ=255)
gCCGC.GGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTc < 1:1016419/101‑1 (MQ=255)
c.gGAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTgg < 2:936877/101‑1 (MQ=255)
gggAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTgg < 1:3837846/100‑1 (MQ=255)
ggAAC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGc < 1:7516293/101‑1 (MQ=255)
aaC.GGGGGGCTTT..CCGCCCCCCGCCCCCCCCCGGCGGATTTTCACCCAGAAAAAACGAACGGGGTTCTTCTTGGGGAAAAAACGCCCCCTTTTCtttggtc > 2:1306518/1‑96 (MQ=255)
aC.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCa < 2:8647605/101‑1 (MQ=255)
c.GGGGGGCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCaa < 1:7352151/101‑1 (MQ=255)
ggggggCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCaaa < 1:821720/101‑1 (MQ=255)
gggggCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAAt < 2:6678645/101‑1 (MQ=255)
ggggCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATa < 2:6339607/101‑1 (MQ=255)
ggggCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATa < 1:9034755/101‑1 (MQ=255)
gggCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATAc < 1:4971744/101‑1 (MQ=255)
gggCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATAc < 2:5607769/101‑1 (MQ=255)
ggCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACg < 1:5848288/101‑1 (MQ=255)
ggCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGCAAAAATACGCCCCTTTTTCTTGGCTCAAATACg < 1:4759970/101‑1 (MQ=38)
gCTTT..CCGCCCCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGc > 2:6280290/1‑101 (MQ=255)
|
GCGACATCGGCGCCGACAAGGTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGCTGCGGCTCGAGGAAAGCTGAAGCCGC.GGAAC.GGGGGGCTTT..CCG..CCCCGCACCCCCCGGGCGTATTTGCACCAAGAAAAAGCGAACGGGTTTCTTCTTGGGAAAAATACGCCCCTTTTTCTTGGCTCAAATACGC > NC_014034/235495‑235686
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 30 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|