Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,757,444 +C 1.6% intergenic (+321/‑248) RCAP_rcc02566 → / → RCAP_rcc02567 reverse transcriptase catalytic domain‑containing protein/resolvase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,757,4441.→C 1.6% 6.8 0.0 ‑0.9312intergenic (+321/‑248)RCAP_rcc02566/RCAP_rcc02567reverse transcriptase catalytic domain‑containing protein/resolvase
Reads supporting (aligned to +/- strand):  new base (3/2):  ref base (163/144):  total (166/146)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.18e-01

Only 100 of 389 total aligned reads displayed.

AGGCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTCC  >  NC_014034/2757344‑2757544
                                                                                                     |                                                                                                    
 ggCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.c                                                                                                     >  2:4731607/1‑101 (MQ=255)
  gccgccCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cc                                                                                                    <  2:1720202/101‑1 (MQ=255)
   ccgcccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccc                                                                                                   <  2:6961312/101‑1 (MQ=255)
    cgcccgcACGGCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccc                                                                                                  <  2:8638835/101‑1 (MQ=255)
      cccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.cccccc                                                                                                >  1:6618763/1‑101 (MQ=255)
       ccgcGCGGCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccc                                                                                               <  2:4051275/101‑1 (MQ=255)
         gcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccccc                                                                                             <  1:1741694/101‑1 (MQ=255)
         gcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.ccccccccc                                                                                             >  2:7895433/1‑101 (MQ=255)
          cACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCg                                                                                            <  1:9033017/101‑1 (MQ=255)
            cGGCAAGCGCCAGCCGCAAAGGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGt                                                                                          >  1:8217553/1‑101 (MQ=255)
            cGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCggg                                                                                          >  2:4119940/1‑100 (MQ=255)
            cGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGt                                                                                          >  2:9126162/1‑101 (MQ=255)
            cGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGt                                                                                          >  2:8429838/1‑101 (MQ=255)
            cGGCAAGCGCCAGCCGCAAAAGCGAGCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGt                                                                                          <  2:5082455/101‑1 (MQ=255)
             ggCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTg                                                                                         >  2:7540930/1‑101 (MQ=255)
                 accgcCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGgccg                                                                                     <  2:3080009/99‑1 (MQ=255)
                 aGCGCCAGCCGCAAAACCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGgccg                                                                                     <  2:6252307/101‑1 (MQ=255)
                    cccAGCCGCAAAAGCGATCAGGGCCGCAGATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGccgccc                                                                                  <  1:6401429/100‑1 (MQ=255)
                     ccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGGGGccgcccg                                                                                 >  1:671617/1‑101 (MQ=255)
                      cAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGccgcccgc                                                                                >  2:3199784/1‑101 (MQ=255)
                       aGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCcgcccccc                                                                               >  1:5878560/1‑101 (MQ=255)
                         ccGCAAAAGCGATCAGGGCCGCATTTTTTGGCGGAAAAATCCGAGCCCCCCCCCCGACCGAAGTGCAGCCGCGCAG.GCCCCCCCCGGTGGCCGCCCGCCCt                                                                             <  2:2821695/101‑1 (MQ=255)
                          cGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTg                                                                            <  2:8220786/101‑1 (MQ=255)
                          cGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTg                                                                            <  1:8689828/101‑1 (MQ=255)
                          cGCAAAAGCGATCAGGGCCGCATATTTGGGCGGAAAAACCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCCGGTGGCCGCCCGCCCt                                                                             <  2:6069354/101‑1 (MQ=255)
                            cAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTggg                                                                          >  1:3944648/1‑101 (MQ=255)
                             aaaaGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGc                                                                         >  1:465401/1‑101 (MQ=255)
                                aGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCg                                                                      <  1:4743699/101‑1 (MQ=255)
                                 gCGATGGGGGCCGCATATTTTGCCGGAAAAATCCGAGCCACCACCCCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGt                                                                     <  2:1100367/101‑1 (MQ=255)
                                  cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCgct                                                                    >  2:5890366/1‑99 (MQ=255)
                                  cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    >  1:8031473/1‑101 (MQ=255)
                                  cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    >  1:7338169/1‑101 (MQ=255)
                                  cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    <  2:5393405/101‑1 (MQ=255)
                                  cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    >  1:1114457/1‑101 (MQ=255)
                                  cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    >  1:4292152/1‑101 (MQ=255)
                                   gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTc                                                                   <  1:4158292/101‑1 (MQ=255)
                                   gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTc                                                                   <  1:5340128/101‑1 (MQ=255)
                                   gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTc                                                                   <  1:6078066/101‑1 (MQ=255)
                                   gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGGGGCCGCCACCACTGGACCCGtcc                                                                   >  1:7524626/1‑99 (MQ=255)
                                    aTCGGGGCCGCATATTTTGGCGGAAAAACCCGAGCCACCCCCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCa                                                                  <  2:3569614/101‑1 (MQ=255)
                                    aTCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCa                                                                  >  1:3493891/1‑101 (MQ=255)
                                     tCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGCGGCCGCCCCCCCCGGGCACGTTCac                                                                 >  2:197646/1‑100 (MQ=255)
                                      cggggCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAgg                                                                <  1:5072537/99‑1 (MQ=255)
                                      cAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAgg                                                                <  1:5586471/101‑1 (MQ=255)
                                       aGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAggc                                                               >  1:4950568/1‑100 (MQ=255)
                                        gggCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTc                                                              >  1:3041067/1‑101 (MQ=255)
                                         ggCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCg                                                             >  2:808559/1‑101 (MQ=255)
                                           ccGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGcc                                                           <  2:3395428/101‑1 (MQ=255)
                                             gCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCTCGTTCAGGTCGCCCa                                                         <  1:7643498/101‑1 (MQ=255)
                                             gCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCa                                                         >  2:5302046/1‑101 (MQ=255)
                                              cATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAg                                                        >  2:7646763/1‑101 (MQ=255)
                                               atatTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCCGGTCGCCCAGc                                                       >  2:2313531/1‑101 (MQ=255)
                                                 atTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCAc                                                     <  1:6248023/101‑1 (MQ=255)
                                                 atTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCAc                                                     >  2:7184521/1‑101 (MQ=255)
                                                 atTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGGCGCCCAGCAc                                                     >  1:3674825/1‑101 (MQ=255)
                                                  ttttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACg                                                    <  2:2028039/101‑1 (MQ=255)
                                                   tttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGATCCGGTCGCCCAGCACGc                                                   >  1:456556/1‑101 (MQ=255)
                                                     tGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGGGGCCCCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCCCGCTc                                                 >  1:3248423/1‑101 (MQ=255)
                                                     tGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG..CCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTcc                                                <  2:1563292/101‑1 (MQ=255)
                                                       gCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTccc                                               >  1:2398595/1‑101 (MQ=255)
                                                       gCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTccc                                               <  1:3982651/101‑1 (MQ=255)
                                                       gCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTccc                                               >  2:3698335/1‑101 (MQ=255)
                                                         ggAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGa                                             >  1:7106289/1‑101 (MQ=255)
                                                          gAAAAACCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAg                                            <  1:1187068/101‑1 (MQ=255)
                                                            aaaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgc                                          >  1:8971577/1‑101 (MQ=255)
                                                             aaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGGTCAGGTCGCCCAGCACGCTCCCCAGgcc                                         >  2:1860287/1‑101 (MQ=255)
                                                               aTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgccgc                                       <  2:2468250/101‑1 (MQ=255)
                                                               aTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgccgc                                       >  2:5708890/1‑101 (MQ=255)
                                                                 ccGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGccc                                     <  2:4529351/101‑1 (MQ=255)
                                                                 ccGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGCGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGccc                                     >  2:4257534/1‑101 (MQ=255)
                                                                   gacccaccaCCTCGACCGAAGTCCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  2:4625920/98‑1 (MQ=255)
                                                                   gAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCTCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  2:3944533/101‑1 (MQ=255)
                                                                   gAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  2:4897772/101‑1 (MQ=255)
                                                                    aGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAg                                  >  2:6759109/1‑101 (MQ=255)
                                                                    aGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAg                                  <  1:8430201/101‑1 (MQ=255)
                                                                     gCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCCGGGCCCGTTCAGGGCGCCCAGCCCGCTCCCGAGGCCGCCCCAgc                                 >  2:6839878/1‑101 (MQ=255)
                                                                       caccacCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAgcgc                               >  1:7031933/1‑101 (MQ=255)
                                                                       caccacCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAgcgc                               >  1:3771065/1‑101 (MQ=255)
                                                                       caccacCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAgcgc                               >  1:4415372/1‑101 (MQ=255)
                                                                        accaccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCGCCCCGCCCTGGGCCCGTTCAGGGCGCCCAGCACGCTCCCCTGGCCGCCCCCGggcc                              >  2:2547660/1‑101 (MQ=255)
                                                                            ccTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGccc                          >  1:2084244/1‑101 (MQ=255)
                                                                              tCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGccccc                        >  1:7189833/1‑100 (MQ=255)
                                                                                gACGGAAGTGCAGCCGCGCCG.CCCCCCCCCGGTGCCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTcc                      <  2:2950489/101‑1 (MQ=255)
                                                                                gACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTcc                      <  1:1417078/101‑1 (MQ=255)
                                                                                gACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTcc                      <  1:9143062/101‑1 (MQ=255)
                                                                                 aCCGAAGTGCCGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTccc                     <  1:8327994/101‑1 (MQ=255)
                                                                                      aGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCCCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAc                >  1:7970129/1‑101 (MQ=255)
                                                                                        tGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAccc              <  1:6115490/101‑1 (MQ=255)
                                                                                         gCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcccc             <  2:1377242/101‑1 (MQ=255)
                                                                                         gCAGCCGCGCAC.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcccc             <  2:9061258/101‑1 (MQ=255)
                                                                                           aGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCgg           >  2:2673475/1‑101 (MQ=255)
                                                                                             gcgcgCAC.CCCCCCCCCGGCGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCa         <  1:577889/100‑1 (MQ=255)
                                                                                             ccGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGcc         >  2:59700/1‑100 (MQ=255)
                                                                                              cgcgCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCAc        <  2:5558487/101‑1 (MQ=255)
                                                                                                cgcAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACct      <  1:2855408/101‑1 (MQ=255)
                                                                                                cgcAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACct      >  1:8889187/1‑101 (MQ=255)
                                                                                                  cAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctct    <  2:8842978/101‑1 (MQ=255)
                                                                                                   aG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCtctc   >  1:2689446/1‑101 (MQ=255)
                                                                                                   aG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCtctc   >  2:3367266/1‑101 (MQ=255)
                                                                                                    g.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTcc  <  2:6549798/101‑1 (MQ=255)
                                                                                                     |                                                                                                    
AGGCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAG.CCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTCC  >  NC_014034/2757344‑2757544

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG