BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1103359 =	347 (0.760)	125 (0.270)	10/200	35.1	0.35	intergenic (‑359/+59)	ugpB/regA2	sn‑glycerol‑3‑phosphate‑binding periplasmic protein ugpB/photosynthetic apparatus regulatory protein RegA
*	?	NC_014034	= 2330175	122 (0.270)	125 (0.270)	10/200	35.1	0.35	intergenic (+150/+162)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 125 total aligned reads displayed.


TTTTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.....................................................................................................  <  NC_014034/1103403‑1103359


.............................................CG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  <  NC_014034/2330175‑2330076


TTTTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTG                                             >  1:6726000/1‑101 (MQ=1)


TTTTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTG                                             >  2:1971050/1‑101 (MQ=1)


 TTTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGC                                            <  1:6924632/101‑1 (MQ=1)


 TTTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGC                                            >  2:3657707/1‑101 (MQ=1)


 TTTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGC                                            >  1:7526343/1‑101 (MQ=1)


  TTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCG                                           >  1:811931/1‑101 (MQ=1)


   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  2:7548481/1‑101 (MQ=1)


   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  1:2334390/1‑101 (MQ=1)


   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  2:6086929/1‑101 (MQ=1)


   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  2:3910292/1‑101 (MQ=1)


   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  1:487212/1‑101 (MQ=1)


   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  2:2919808/1‑101 (MQ=1)


    TCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGC                                         >  1:8961108/1‑101 (MQ=1)


     CTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCG                                        >  2:8672642/1‑101 (MQ=1)


         gcgCAAATACGCCGGGGGTGCGGGGGCGGA.CCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCT                                    <  1:7394452/98‑1 (MQ=1)


           gCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGC                                  <  1:9107623/100‑1 (MQ=1)


           gCAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGC                                  <  2:3005528/100‑1 (MQ=1)


            CAAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCG                                 >  1:7521969/1‑101 (MQ=1)


             AAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGC                                >  1:7767933/1‑101 (MQ=1)


             AAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGC                                >  1:3689605/1‑101 (MQ=1)


             AAATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGC                                >  2:3494384/1‑101 (MQ=1)


              AATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCG                               >  1:5176103/1‑101 (MQ=1)


              AATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCG                               >  1:2863333/1‑101 (MQ=1)


              AATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCG                               >  2:5053228/1‑101 (MQ=1)


              AATACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCG                               >  2:8501062/1‑101 (MQ=1)


                TACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCC                             >  2:328287/1‑101 (MQ=1)


                TACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCC                             >  1:7001597/1‑101 (MQ=1)


                TACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCACTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCC                             >  1:8134796/1‑101 (MQ=1)


                 ACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCG                            >  2:1368636/1‑101 (MQ=1)


                 ACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCG                            >  2:3239900/1‑101 (MQ=1)


                 ACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCG                            >  2:678814/1‑101 (MQ=1)


                 ACGCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGCCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCG                            >  1:1175746/1‑101 (MQ=1)


                 ACGCCGGGGGTGCGGGGGCGGAG.CCACCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCG                            >  2:1694265/1‑101 (MQ=1)


                   GCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTT                          >  1:1028602/1‑101 (MQ=1)


                   GCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTT                          >  1:2377988/1‑101 (MQ=1)


                   GCCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTT                          >  1:5513995/1‑101 (MQ=1)


                    CCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTG                         >  2:4625823/1‑101 (MQ=1)


                    CCGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTG                         >  1:3299308/1‑101 (MQ=1)


                     CGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGC                        >  1:3669380/1‑101 (MQ=1)


                     CGGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGC                        >  1:4931177/1‑101 (MQ=1)


                      GGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCC                       >  1:9201157/1‑101 (MQ=1)


                      GGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCC                       >  2:2222644/1‑101 (MQ=1)


                      GGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCC                       <  2:4802253/101‑1 (MQ=1)


                      GGGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCC                       >  2:8294654/1‑101 (MQ=1)


                       GGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCG                      <  1:4576514/101‑1 (MQ=1)


                       GGGGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCG                      >  2:8025779/1‑101 (MQ=1)


                         GGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCC                    >  2:286078/1‑101 (MQ=1)


                         GGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCC                    >  1:5686942/1‑101 (MQ=1)


                         GGTGCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCC                    >  2:1120287/1‑101 (MQ=1)


                           tgCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCT                  <  1:3020050/99‑1 (MQ=1)


                           gggGGGGGGGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCT                  <  1:3512954/98‑1 (MQ=0)


                           ggCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCT                  <  1:1704152/99‑1 (MQ=1)


                           ggCGGGGGCGGA.CCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCT                  <  2:462721/99‑1 (MQ=1)


                            gCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTT                 >  2:1814656/2‑101 (MQ=1)


                            gCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTT                 <  1:4097857/100‑1 (MQ=1)


                            gCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTT                 >  2:282209/2‑101 (MQ=1)


                            gCGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTT                 <  2:2876583/100‑1 (MQ=1)


                             CGGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTG                >  1:3379124/1‑101 (MQ=1)


                              GGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGG               >  1:2828120/1‑101 (MQ=1)


                              GGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGG               >  2:4970720/1‑101 (MQ=1)


                              GGGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGG               >  1:6383029/1‑101 (MQ=1)


                              GGGGGCGGA.CCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGG               <  2:4844510/101‑1 (MQ=1)


                               GGGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGC              >  2:6895057/1‑101 (MQ=1)


                                GGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCG             >  2:1407642/1‑101 (MQ=1)


                                GGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCG             >  2:3628182/1‑101 (MQ=1)


                                GGGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCG             >  1:4900272/1‑101 (MQ=1)


                                 GGCGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGG            >  1:2389370/1‑101 (MQ=1)


                                  gggggcgCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGG            <  1:4104406/94‑1 (MQ=11)


                                  gggcgGCCCCCCGCCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCG             <  2:8890201/96‑1 (MQ=0)


                                   CGGAG.CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAG          >  2:6472398/1‑101 (MQ=1)


                                     ggcCCCCCCGCCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAG          <  2:2377915/98‑1 (MQ=0)


                                     ggagCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGG         >  2:3619556/5‑101 (MQ=1)


                                     ggagCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGG         >  1:7270785/5‑101 (MQ=1)


                                     ggagCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGG         >  1:2251815/5‑101 (MQ=1)


                                     ggagCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGG         >  1:9024108/5‑101 (MQ=1)


                                      gagCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGC        >  2:7075133/4‑101 (MQ=1)


                                      gagCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGC        >  2:8853512/4‑101 (MQ=1)


                                      ccCCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGC        <  1:678824/99‑1 (MQ=1)


                                       cCCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       <  1:4350971/100‑1 (MQ=1)


                                       cCCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       <  1:8501442/100‑1 (MQ=1)


                                       agCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       >  1:595490/3‑101 (MQ=1)


                                       agCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       >  2:7077336/3‑101 (MQ=1)


                                       agCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       >  1:8159284/3‑101 (MQ=1)


                                       agCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       >  1:8442233/3‑101 (MQ=1)


                                       agCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       >  1:44964/3‑101 (MQ=1)


                                       GCCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       <  1:2819837/101‑1 (MQ=1)


                                        gCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCA      >  2:411591/2‑101 (MQ=1)


                                        gCCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCA      >  1:3210535/2‑101 (MQ=1)


                                         CCCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAA     >  1:6332450/1‑101 (MQ=1)


                                          CCCCG.CCGGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAG    <  2:7128781/101‑1 (MQ=1)


                                          CCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAc    >  2:8223328/1‑100 (MQ=1)


                                          CCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAG    >  1:6937821/1‑101 (MQ=1)


                                          CCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAG    <  2:331285/101‑1 (MQ=1)


                                          CCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGACAAG    >  2:2397268/1‑101 (MQ=1)


                                          CCCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGAGCGCCGTTGCCGCCCTTGGCGGAGGCCAAG    >  1:9054214/1‑101 (MQ=1)


                                           CCCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGC   <  1:1800644/101‑1 (MQ=1)


                                            CCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  <  1:6659054/101‑1 (MQ=1)


                                            CCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  <  2:7910902/101‑1 (MQ=1)


                                            CCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  <  1:8081452/101‑1 (MQ=1)


                                            CCG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  >  1:4525600/1‑101 (MQ=1)


TTTTTCTTGGCCCAAATACGCCGGGGGTCCGGGGGCGGAGCCCCC.....................................................................................................  <  NC_014034/1103403‑1103359


.............................................CG.CCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  <  NC_014034/2330175‑2330076

Base quality scores:


ATCG

< 3 ≤


ATCG

< 21 ≤


ATCG

< 30 ≤


ATCG

< 34 ≤


ATCG

< 39 ≤


ATCG