New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1217374 =	380 (0.850)	12 (0.030)	2/194	41.9	0.03	intergenic (+97/+131)	gcvP/fabH1	glycine dehydrogenase/3‑oxoacyl‑ACP synthase III
	?	NC_014034	1473410 =	375 (0.820)					intergenic (+117/+102)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
Rejected: Position hash score below cutoff.

CTGCCTTTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCC...................................................................................................  <  NC_014034/1217473‑1217374 ......................................................................................................GGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCA  >  NC_014034/1473410‑1473506                                                                                                     ||                                                                                                  CTGCCTTTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCCG                                                                                                    <  1:1127948/101‑1 (MQ=32)     CTTTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGCGAAGCGCCCGCCGCGGG                                                                                                >  2:2481888/1‑101 (MQ=17)       TTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGCGGAGCGCCCGCCGCGGGCG                                                                                              >  2:1071198/1‑101 (MQ=12)        TCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCCGGGGGCGG                                                                                             >  1:4125424/1‑101 (MQ=1)               CCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCCGGGGGCGGGGGGGGg                                                                                      >  2:6056306/1‑100 (MQ=0)                                                                                       gcccggccCCCGCCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGG              <  2:34808/93‑1 (MQ=0)                                                                                           gGCGCCCGCGGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAA          <  1:4133081/100‑1 (MQ=0)                                                                                           cGCGCCCGCCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAA          <  2:1298941/100‑1 (MQ=1)                                                                                            gccCCCGCCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAA         <  2:6352277/98‑1 (MQ=0)                                                                                               CCCGCGGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGACCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAG      <  2:2112634/101‑1 (MQ=0)                                                                                                CCGCCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGG     <  1:5436722/101‑1 (MQ=1)                                                                                                  GCCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGC   <  2:8025133/101‑1 (MQ=1)                                                                                                   CCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCA  <  2:347000/101‑1 (MQ=1)                                                                                                     ||                                                                                                  CTGCCTTTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCC...................................................................................................  <  NC_014034/1217473‑1217374 ......................................................................................................GGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCA  >  NC_014034/1473410‑1473506 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 27 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG