New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1253895 =93 (0.210)98 (0.220) 21/196 28.1 0.32 intergenic (+53/+38) RCAP_rcc01181/hisH hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
?NC_014034 = 3276387 324 (0.710)intergenic (‑139/+110) RCAP_rcc03082/RCAP_rcc03083 lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

CCCGGAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCG.....................................................................................................  <  NC_014034/1253996‑1253895
.....................................................................................................CGGGGGCT.CCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAGAAACGGGGGCCGGTTGCCCGGGGGGCCTTGCGCCGCATTGCCCCTTGCCCCCGTCGTG  <  NC_014034/3276387‑3276288
                                                                                                                                                                                                            
  CGGAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGG                                                                                                      >  1:6296051/1‑101 (MQ=1)
  CGGAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGG                                                                                                      >  2:3856785/1‑101 (MQ=1)
   GGAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGG                                                                                                     >  1:142184/1‑101 (MQ=1)
   GGAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGG                                                                                                     <  2:5707086/101‑1 (MQ=1)
   GGAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCCGG                                                                                                     >  1:7643114/1‑101 (MQ=1)
   GGAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCCGG                                                                                                     >  1:5053519/1‑101 (MQ=1)
    GAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGCGGCGACCC.GGCGGGG                                                                                                    >  2:8341546/1‑101 (MQ=1)
     AGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGG                                                                                                   >  2:6121955/1‑101 (MQ=1)
      GAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGGCGGGGG                                                                                                   >  1:1877496/1‑101 (MQ=11)
      GAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCCGGGGg                                                                                                  >  2:280372/1‑100 (MQ=1)
       AAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGcatg                                                                                                 <  2:4331217/101‑5 (MQ=1)
       AAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGgg                                                                                                 >  1:2702243/1‑99 (MQ=1)
       AAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGgg                                                                                                 >  2:475652/1‑99 (MQ=1)
       AAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGgc                                                                                                 >  2:6545792/1‑99 (MQ=1)
       AAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCc                                                                                                 >  2:4986313/1‑100 (MQ=1)
       AAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT                                                                                                 >  2:4816373/1‑101 (MQ=1)
       AAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT                                                                                                 <  2:7017969/101‑1 (MQ=1)
       AAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT                                                                                                 <  2:7903739/101‑1 (MQ=1)
        AATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCTGGGGCgc                                                                                                >  2:1235628/1‑99 (MQ=1)
        AATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGggg                                                                                                >  2:6031137/1‑98 (MQ=1)
        AATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGgcc                                                                                                >  1:8770299/1‑98 (MQ=1)
         ATCGCAGTGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CC                                                                                              <  1:7077297/101‑1 (MQ=1)
         ATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGgggc                                                                                               >  2:137421/1‑97 (MQ=1)
         ATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGggcc                                                                                               >  1:9083315/1‑97 (MQ=1)
         ATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CC                                                                                              >  2:3454441/1‑101 (MQ=1)
         ATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CC                                                                                              <  2:4784073/101‑1 (MQ=1)
         ATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CC                                                                                              <  1:6252050/101‑1 (MQ=1)
         ATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CC                                                                                              <  2:8340626/101‑1 (MQ=1)
         ATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CC                                                                                              <  1:2593928/101‑1 (MQ=1)
         ATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CC                                                                                              <  2:555277/101‑1 (MQ=1)
          tccgatctCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCG                                                                                             <  1:5968670/93‑1 (MQ=0)
           CGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCCGGGGggcgcg                                                                                             >  2:3327251/1‑95 (MQ=0)
            GCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CCGCC                                                                                           >  2:8736253/1‑101 (MQ=1)
            GCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCC                                                                                           <  2:5675098/101‑1 (MQ=1)
            GCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCC                                                                                           <  2:1070970/101‑1 (MQ=1)
             CAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CCCCCC                                                                                          >  1:5956682/1‑101 (MQ=0)
             CAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCC                                                                                          <  1:2103702/101‑1 (MQ=1)
              AGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGGGGGGGGG.CCGCCCC                                                                                         >  2:7607535/1‑101 (MQ=0)
              AGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCC                                                                                         <  2:5197046/101‑1 (MQ=1)
              AGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCC                                                                                         >  2:7626893/1‑101 (MQ=1)
               GCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGTCCC.GGCGGGGGCT.CCGCCCCC                                                                                        <  1:9189978/101‑1 (MQ=1)
               GCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCC                                                                                        <  1:2750882/101‑1 (MQ=1)
               GCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCC                                                                                        <  2:8165954/101‑1 (MQ=1)
               GCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCC                                                                                        <  2:3660782/101‑1 (MQ=1)
               GCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCC                                                                                        <  1:6122192/101‑1 (MQ=1)
               GCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCC                                                                                        <  2:5925086/101‑1 (MQ=1)
               GCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCC                                                                                        <  1:8249661/101‑1 (MQ=1)
                CGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCTCCCGCCCCC                                                                                        >  2:8283417/1‑101 (MQ=0)
                CGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCG                                                                                       <  1:3149522/101‑1 (MQ=1)
                CGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCG                                                                                       <  2:2499002/101‑1 (MQ=1)
                CGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCG                                                                                       <  1:8556298/101‑1 (MQ=1)
                 GCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CCGCCCCCGc                                                                                      >  2:3658425/1‑100 (MQ=11)
                 GCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CCCCCCCCcc                                                                                      >  2:7699191/1‑99 (MQ=0)
                 GCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGG.CCGCCCCCcc                                                                                      >  2:1815223/1‑99 (MQ=2)
                 GCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGc                                                                                      <  1:6582211/101‑2 (MQ=11)
                 GCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCCGGGGGT.CCCCCCCCcc                                                                                      >  1:1471743/1‑99 (MQ=0)
                  CACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGG.CCGCCCCCccc                                                                                     >  1:1088963/1‑98 (MQ=2)
                  CACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGagatcgga                                                                                     >  2:5968435/1‑93 (MQ=0)
                   cCCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCAC                                                                                    <  2:400752/100‑1 (MQ=17)
                   ACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CCGCCCCCccac                                                                                    >  2:1418089/1‑97 (MQ=2)
                   ACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCAC                                                                                    <  1:3938966/101‑1 (MQ=32)
                    CCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACC                                                                                   <  1:779195/101‑1 (MQ=32)
                     CGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCcccccc                                                                                  >  2:8754487/1‑95 (MQ=0)
                     CGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCC                                                                                  <  1:5883511/101‑1 (MQ=32)
                      GGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CCGCCCCCccccccc                                                                                 >  1:6503981/1‑94 (MQ=2)
                      GGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CCGCCCCCGCACCCC                                                                                 >  1:1540521/1‑101 (MQ=17)
                      GGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCC                                                                                 <  1:8592566/101‑1 (MQ=32)
                      GGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCC                                                                                 <  2:3092275/101‑1 (MQ=32)
                      GGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCC                                                                                 <  2:3206749/101‑1 (MQ=32)
                       GGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGGT.CCGCCCCCcccccccc                                                                                >  1:8468964/1‑93 (MQ=9)
                       GGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCCCCCCC                                                                                >  2:5244745/1‑101 (MQ=17)
                       GGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCC                                                                                <  1:8775277/101‑1 (MQ=32)
                       GGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCC                                                                                <  2:1461199/101‑1 (MQ=32)
                       GGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCC                                                                                <  1:6102354/101‑1 (MQ=32)
                        GCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCG                                                                               <  2:9083840/101‑1 (MQ=32)
                        GCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCG                                                                               <  1:454361/101‑1 (MQ=32)
                        GCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCCCCCCCCCG                                                                               >  2:2447419/1‑101 (MQ=12)
                          TGCGGATCCTCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGag                                                                             <  2:2437554/101‑3 (MQ=18)
                          TGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCTCCGag                                                                             <  1:6031374/101‑3 (MQ=18)
                          TGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGag                                                                             <  1:2269673/101‑3 (MQ=33)
                          TGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGag                                                                             <  2:7387165/101‑3 (MQ=33)
                            CGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGaggt                                                                           <  1:3083312/101‑5 (MQ=32)
                            CGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGaggt                                                                           <  2:2238237/101‑5 (MQ=32)
                            CGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGaggt                                                                           <  1:9036079/101‑5 (MQ=32)
                             GGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGaggta                                                                          <  1:112592/101‑6 (MQ=32)
                             GGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGaggta                                                                          <  2:4411969/101‑6 (MQ=32)
                             GGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGaggta                                                                          <  2:8258512/101‑6 (MQ=32)
                             GGATCATCTCGAATTTCCTGAACGGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGaggta                                                                          <  2:6553968/101‑6 (MQ=17)
                              GATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTAT                                                                         <  1:1931978/101‑1 (MQ=32)
                              GATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTAT                                                                         <  2:6667438/101‑1 (MQ=32)
                               ATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTATT                                                                        <  2:1481405/101‑1 (MQ=32)
                               ATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTATT                                                                        <  2:2065810/101‑1 (MQ=32)
                                TCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTATTT                                                                       <  1:3327355/101‑1 (MQ=32)
                                TCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTATTT                                                                       <  2:6339656/101‑1 (MQ=32)
                                TCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTATTT                                                                       <  2:3332117/101‑1 (MQ=32)
                                TCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTATTT                                                                       <  2:5520436/101‑1 (MQ=32)
                                  ATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTATTTag                                                                     <  1:8570345/101‑3 (MQ=32)
                                  ATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCGGGGGCT.CCGCCCCCGCACCCCCGAGGTATTTag                                                                     <  2:2702161/101‑3 (MQ=32)
                                                                                                                                                                                                            
CCCGGAGAAATCGCAGCGCACCGGGCTGCGGATCATCTCGAATTTCCTGAACTGGAAGCCGTGAGAGGATTTCGCCTCGGCTTTCGCCGAGGCGACCC.GGCG.....................................................................................................  <  NC_014034/1253996‑1253895
.....................................................................................................CGGGGGCT.CCGCCCCCGGACCCCCGGCGTATTTGGGCCAAGAAGAAACGGGGGCCGGTTGCCCGGGGGGCCTTGCGCCGCATTGCCCCTTGCCCCCGTCGTG  <  NC_014034/3276387‑3276288

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG