New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 125586582 (0.250)138 (0.410) 35/146 16.5 0.41 intergenic (+35/+207) RCAP_rcc01184/RCAP_rcc01185 CsbD family protein/methyl‑accepting chemotaxis sensory transducer
?NC_014034 = 3407185 321 (0.700)intergenic (+141/‑64) ileS/RCAP_rcc03205 isoleucyl‑tRNA synthetase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 229 total aligned reads displayed.

AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGG..........................................................  >  NC_014034/1255766‑1255865
...............................................................................................................................GGGGGGCGCTGCCCCCCGTCCGCAAGCGGAC  <  NC_014034/3407185‑3407155
                                                                                                    |||||||||||||||||||||||||||                               
 GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGATGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGC                                                          >  2:4366453/1‑101 (MQ=1)
 GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCCGGC                                                          >  1:7178722/1‑101 (MQ=1)
  AAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCC                                                         >  1:1236705/1‑101 (MQ=1)
  AAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCC                                                         >  2:3730306/1‑101 (MQ=1)
   AATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCC                                                        >  1:6200331/1‑101 (MQ=1)
    ATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCC                                                       >  2:4493913/1‑101 (MQ=1)
     TACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                      <  1:2486769/101‑1 (MQ=1)
     TACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                      >  2:2435626/1‑101 (MQ=1)
      gCGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                     <  2:1965478/100‑1 (MQ=1)
      ACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                     >  2:1730377/1‑101 (MQ=1)
        GGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCT                                                   >  1:5713647/1‑101 (MQ=1)
          CCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTT                                                 <  2:7332286/101‑1 (MQ=1)
           CGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTC                                                >  1:8453027/1‑101 (MQ=1)
             CACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGG                                              >  2:393749/1‑101 (MQ=1)
             CACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGG                                              >  1:3791872/1‑101 (MQ=1)
              ACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGT                                             >  1:7770284/1‑101 (MQ=1)
              ACCAAGGAGGCGGCGAAGAAGGAACTCGACGACTTCCTGTCGAAACTCCTACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGT                                             <  1:1520995/101‑1 (MQ=0)
               CCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTC                                            >  2:2258945/1‑101 (MQ=1)
                CAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCC                                           <  2:6151648/101‑1 (MQ=1)
                 AAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCG                                          >  2:3887888/1‑101 (MQ=1)
                 AAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCG                                          >  1:906047/1‑101 (MQ=1)
                 AAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCG                                          <  2:8991869/101‑1 (MQ=1)
                   GGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCC                                        >  1:4835351/1‑101 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                       <  1:2547200/101‑1 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                       <  2:3978159/101‑1 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                       >  2:5955245/1‑101 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                       >  1:1667282/1‑101 (MQ=1)
                      GGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGA                                     >  1:4520408/1‑101 (MQ=1)
                        gGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAG                                   <  2:3327783/100‑1 (MQ=1)
                          GCGAAGAAGGAAGTCGACGACTTCCTGTCGAAAGTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAG                                 >  1:6464410/1‑101 (MQ=1)
                           CGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGG                                >  2:8311307/1‑101 (MQ=1)
                           CGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGG                                >  1:4715492/1‑101 (MQ=1)
                            GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGGCCCCGCTTTCGGTCCGCCCGAAGAGGG                               >  2:4191274/1‑101 (MQ=1)
                            GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCGCCGCTTTCGGTCCGCCCGAAGAGGG                               >  2:2852995/1‑101 (MQ=1)
                            GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGG                               >  2:8573135/1‑101 (MQ=1)
                            GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGG                               >  2:5198163/1‑101 (MQ=1)
                             AAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGG                              >  2:8163939/1‑101 (MQ=1)
                             AAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGG                              >  2:634591/1‑101 (MQ=1)
                             AAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGG                              >  2:2719263/1‑101 (MQ=1)
                              AGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGG                             >  1:2067910/1‑101 (MQ=1)
                              AGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTGCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGG                             >  2:5906318/1‑101 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGcg                            >  2:68509/1‑99 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                            >  2:2525259/1‑101 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                            >  1:6138074/1‑101 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                           >  2:2390383/1‑101 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                           >  1:2687843/1‑101 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                           >  2:3298425/1‑101 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                          >  1:2257966/1‑101 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                          <  2:6200092/101‑1 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGACCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                          >  2:8508733/1‑101 (MQ=1)
                                  GGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCG                         >  1:8678237/1‑101 (MQ=1)
                                  GGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCG                         <  1:5311798/101‑1 (MQ=1)
                                   GAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGC                        >  2:5178275/1‑101 (MQ=1)
                                   GAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGC                        >  2:198727/1‑101 (MQ=1)
                                    AAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCT                       <  1:407193/101‑1 (MQ=1)
                                    AAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCT                       <  2:6527826/101‑1 (MQ=1)
                                     AGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCcg                      >  1:6534541/1‑99 (MQ=1)
                                     AGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTG                      >  1:8886240/1‑101 (MQ=1)
                                     AGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTG                      <  2:7929634/101‑1 (MQ=1)
                                     AGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTG                      <  2:311670/101‑1 (MQ=1)
                                       TCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGCAGAGGGGGCGCGCTGCC                    >  1:2788714/1‑101 (MQ=0)
                                        CGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCC                   <  2:8378296/101‑1 (MQ=1)
                                        CGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCC                   <  1:2390456/101‑1 (MQ=1)
                                         GACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCC                  >  1:1190155/1‑101 (MQ=1)
                                         GACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCC                  >  1:2880184/1‑101 (MQ=1)
                                         GACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCC                  >  2:164402/1‑101 (MQ=1)
                                          ACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCC                 >  1:7276948/1‑101 (MQ=1)
                                          ACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCC                 >  2:4676467/1‑101 (MQ=1)
                                          ACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCC                 <  1:916005/101‑1 (MQ=1)
                                           CGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCC                <  1:5198332/101‑1 (MQ=1)
                                           CGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCC                <  2:4244384/101‑1 (MQ=1)
                                           CGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCC                <  2:7769951/101‑1 (MQ=1)
                                           CGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCC                <  2:128685/101‑1 (MQ=1)
                                           CGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCC                <  1:3115938/101‑1 (MQ=1)
                                            GACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCc               >  1:4219/1‑100 (MQ=1)
                                             ACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT              <  2:1041000/101‑1 (MQ=1)
                                             ACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT              >  2:8237135/1‑101 (MQ=1)
                                              CTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTC             <  2:6377796/101‑1 (MQ=1)
                                              CTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTC             >  1:1348372/1‑101 (MQ=1)
                                               TTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCC            >  2:7408636/1‑101 (MQ=1)
                                               TTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCC            <  2:5797493/101‑1 (MQ=1)
                                                TCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCc           >  2:8746720/1‑100 (MQ=1)
                                                TCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCc           >  1:1105307/1‑100 (MQ=1)
                                                 CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAATCGGGGGCCTTCGGGCCCCCGCTTTCGGCCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCct          <  1:8261062/101‑3 (MQ=0)
                                                 CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCTCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCct          <  1:8561907/101‑3 (MQ=1)
                                                 CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCct          <  2:3455087/101‑3 (MQ=1)
                                                 CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCcc          >  2:4859350/1‑99 (MQ=1)
                                                  CTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctg         >  1:195133/1‑98 (MQ=1)
                                                  CTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctg         >  2:2210374/1‑98 (MQ=1)
                                                   TGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgc        >  2:5336807/1‑97 (MQ=1)
                                                      CGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcggg     >  1:445653/1‑94 (MQ=1)
                                                      CGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcggg     >  1:6375196/1‑94 (MQ=1)
                                                       GAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcgggc    >  1:7396705/1‑93 (MQ=1)
                                                       GAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcggga    <  1:3102907/101‑9 (MQ=1)
                                                        AAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcgggac   <  1:5589595/101‑10 (MQ=1)
                                                        AAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcgggac   <  1:5897708/101‑10 (MQ=1)
                                                        AAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcgggac   <  1:1833118/101‑10 (MQ=1)
                                                        AAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcgggac   <  1:974900/101‑10 (MQ=1)
                                                         AACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcgggact  <  1:7992085/101‑11 (MQ=1)
                                                         AACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCctgcgggact  <  2:3174960/101‑11 (MQ=1)
                                                                                                    |||||||||||||||||||||||||||                               
AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGG..........................................................  >  NC_014034/1255766‑1255865
...............................................................................................................................GGGGGGCGCTGCCCCCCGTCCGCAAGCGGAC  <  NC_014034/3407185‑3407155

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG