New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1473410 =	323 (0.850)	7 (0.020)	3/166	38.0	0.02	intergenic (+117/+102)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
	?	NC_014034	3382066 =	353 (0.770)					intergenic (+100/+129)	ispB/RCAP_rcc03185	octaprenyl‑diphosphate synthase/hypothetical protein
Rejected: Position hash score below cutoff.

CGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCC....................................................................................................  <  NC_014034/1473526‑1473410 ....................................................................................................CAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGAAAGGCAG  >  NC_014034/3382066‑3382165                                                                                                                                                                                                                                                                                                                   aacGCCCTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAA                              <  1:7754891/98‑1 (MQ=255)                                                                                          acGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAAC                             <  1:5057691/99‑1 (MQ=255)                                                                                          aaGCCCCCGGCCGGCCCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAAC                             <  2:4721075/99‑1 (MQ=255)                                                                                          AGGCACCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAAC                             <  2:5915547/101‑1 (MQ=255)                                                                                             CCCTCGGCCAGCCCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGG                          <  1:217381/101‑1 (MQ=255)                                                                                                cCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTC                       <  2:5035792/100‑1 (MQ=255)                                                                                                TCGGCCAGCCCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTC                       <  1:6103994/101‑1 (MQ=255)                                                                                                                                                                                                                           CGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCC....................................................................................................  <  NC_014034/1473526‑1473410 ....................................................................................................CAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGAAAGGCAG  >  NC_014034/3382066‑3382165 Base quality scores:  ATCG  < 3 ≤  ATCG  < 26 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG