BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1562015	437 (1.040)	243 (0.580)	75/184	9.6	0.51	intergenic (+209/+11)	RCAP_rcc01445/RCAP_rcc01446	tonB‑dependent receptor/M20 family peptidase
*	?	NC_014034	1608059 =	26 (0.060)	243 (0.580)	75/184	9.6	0.51	intergenic (+329/‑18)	RCAP_rcc01484/murD	hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
Rejected: Position hash score below cutoff.

Only 100 of 243 total aligned reads displayed.


TCTCCGCGCCGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGC....................................................................................................  >  NC_014034/1561908‑1562015


....................................................................................................ACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCACGGCGGCGGCAT  >  NC_014034/1608059‑1608158


                                              gggctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATAT                                                               <  2:1680115/96‑1 (MQ=255)


                                              gggctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATAT                                                               <  2:6795576/96‑1 (MQ=255)


                                               ggctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATG                                                              >  1:9034469/5‑101 (MQ=255)


                                               ggctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATG                                                              <  2:7730706/97‑1 (MQ=255)


                                               ggctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATG                                                              >  2:5356930/5‑101 (MQ=255)


                                                gctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGA                                                             <  2:2104099/98‑1 (MQ=255)


                                                gctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGA                                                             <  2:7156448/98‑1 (MQ=255)


                                                gctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGA                                                             <  2:3505141/98‑1 (MQ=255)


                                                 ctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAG                                                            <  1:1885355/99‑1 (MQ=255)


                                                 ctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAG                                                            >  2:3142907/3‑101 (MQ=255)


                                                 ctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAG                                                            >  2:6594738/3‑101 (MQ=255)


                                                 ctTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTAGCAGATGATACCGGTTCAGGGATATGAG                                                            >  1:6402218/3‑101 (MQ=255)


                                                  tTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGG                                                           >  1:767986/2‑101 (MQ=255)


                                                  tTTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGG                                                           <  2:6084887/100‑1 (MQ=255)


                                                   TTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGG                                                          <  1:7421400/101‑1 (MQ=255)


                                                   TTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGG                                                          >  2:848508/1‑101 (MQ=255)


                                                   TTTCCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGGGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGG                                                          >  2:4565185/1‑101 (MQ=255)


                                                    ttcCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGg                                                         >  1:8387295/4‑100 (MQ=255)


                                                    ttcCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGT                                                         >  2:105799/4‑101 (MQ=255)


                                                    ttcCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGT                                                         <  1:468728/98‑1 (MQ=255)


                                                     tcctatcATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTG                                                        >  2:7407163/8‑101 (MQ=255)


                                                     tcCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTG                                                        >  1:1065544/3‑101 (MQ=255)


                                                     tcCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTG                                                        <  2:2311916/99‑1 (MQ=255)


                                                      cCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGC                                                       >  1:978069/2‑101 (MQ=255)


                                                      cCTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGC                                                       >  1:8519525/2‑101 (MQ=255)


                                                       CTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCG                                                      <  1:8834825/101‑1 (MQ=255)


                                                       CTTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCG                                                      <  1:2859850/101‑1 (MQ=255)


                                                        TTTCATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGC                                                     >  1:412396/1‑101 (MQ=255)


                                                         ttcATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCG                                                    >  2:1948662/4‑101 (MQ=255)


                                                         ttcATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCG                                                    >  1:4070981/4‑101 (MQ=255)


                                                         ttcATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCG                                                    >  1:1627799/4‑101 (MQ=255)


                                                          tcATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGGGCGCGC                                                   >  1:2303099/3‑101 (MQ=255)


                                                           cATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCG                                                  >  2:7506206/2‑101 (MQ=39)


                                                           cATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCG                                                  >  2:1455807/2‑101 (MQ=39)


                                                           cATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCG                                                  >  2:8622667/2‑101 (MQ=39)


                                                           cATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCG                                                  >  1:6708089/2‑101 (MQ=39)


                                                            ATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGT                                                 >  2:8425622/1‑101 (MQ=39)


                                                             TCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTC                                                >  2:8007743/1‑101 (MQ=40)


                                                             TCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTC                                                >  2:5571201/1‑101 (MQ=39)


                                                              CTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCG                                               >  1:1307319/1‑101 (MQ=39)


                                                              CTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCG                                               >  2:1518447/1‑101 (MQ=39)


                                                                TGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGGGCGCGTCGCG                                             >  1:8105971/1‑101 (MQ=38)


                                                                TGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCG                                             >  2:4039772/1‑101 (MQ=38)


                                                                TGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCG                                             >  2:4822777/1‑101 (MQ=38)


                                                                 GCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGG                                            >  1:2721091/1‑101 (MQ=37)


                                                                  CCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGg                                           >  2:6439498/1‑100 (MQ=25)


                                                                  CCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGT                                           <  2:3003631/101‑1 (MQ=35)


                                                                  CCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGT                                           >  1:3364927/1‑101 (MQ=35)


                                                                   CTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTG                                          <  1:1206806/101‑1 (MQ=34)


                                                                   CTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTG                                          <  2:3419033/101‑1 (MQ=34)


                                                                     CAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCT                                        <  1:5347942/101‑1 (MQ=32)


                                                                     CAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCT                                        >  1:202694/1‑101 (MQ=32)


                                                                     CAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCT                                        >  1:76313/1‑101 (MQ=32)


                                                                       AATATCCCCCGGGGGGGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGG                                      <  2:8027712/101‑1 (MQ=0)


                                                                       AATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGG                                      >  2:1134810/1‑101 (MQ=32)


                                                                       AATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGG                                      >  2:7189924/1‑101 (MQ=32)


                                                                       AATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGG                                      >  2:4161675/1‑101 (MQ=32)


                                                                       AATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGG                                      >  1:4459355/1‑101 (MQ=32)


                                                                          ATCCGACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGC                                   <  2:3639673/101‑1 (MQ=14)


                                                                          ATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGC                                   <  1:3440060/101‑1 (MQ=32)


                                                                            CCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTC                                 <  2:3957847/101‑1 (MQ=11)


                                                                            CCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTC                                 >  2:3321115/1‑101 (MQ=11)


                                                                            CCCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTC                                 >  1:7051116/1‑101 (MQ=11)


                                                                             CCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCG                                <  1:2160049/101‑1 (MQ=1)


                                                                             CCACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCG                                >  2:690782/1‑101 (MQ=1)


                                                                              CACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGG                               >  1:3684766/1‑101 (MQ=1)


                                                                              CACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGG                               <  1:5078251/101‑1 (MQ=1)


                                                                               ACGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGG                              >  1:6199431/1‑101 (MQ=1)


                                                                                CGGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGC                             >  1:5821690/1‑101 (MQ=1)


                                                                                 GGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCG                            <  2:8954677/101‑1 (MQ=1)


                                                                                 GGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCG                            >  2:7645547/1‑101 (MQ=1)


                                                                                 GGGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCG                            >  2:4989723/1‑101 (MQ=1)


                                                                                  GGGGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGGGCTGGGGCTCGGGCGg                           >  2:1211767/1‑100 (MQ=1)


                                                                                    GGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTC                         <  1:6059659/101‑1 (MQ=1)


                                                                                    GGTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTC                         <  1:5233423/101‑1 (MQ=1)


                                                                                     GTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCG                        >  2:8294747/1‑101 (MQ=1)


                                                                                     GTGCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCG                        >  2:2263853/1‑101 (MQ=1)


                                                                                       GCGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGG                      >  1:2229208/1‑101 (MQ=1)


                                                                                        CGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGT                     >  2:6946223/1‑101 (MQ=1)


                                                                                        CGGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCCGGCGCTCGGGg                     >  2:1857836/1‑100 (MQ=1)


                                                                                         GGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGgc                    >  2:1411669/1‑99 (MQ=1)


                                                                                         GGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTC                    >  1:3811847/1‑101 (MQ=1)


                                                                                         GGGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTC                    >  1:2605901/1‑101 (MQ=1)


                                                                                          GGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGGGCTCGGGGCT                   >  1:2926049/1‑101 (MQ=0)


                                                                                          GGGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCCCGGGGCT                   >  2:8867520/1‑101 (MQ=0)


                                                                                           GGGTGTGAAGCCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTG                  <  2:4680241/101‑1 (MQ=1)


                                                                                           GGGTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTG                  <  1:4799591/101‑1 (MQ=1)


                                                                                             GTGTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGC                >  2:1782612/1‑101 (MQ=1)


                                                                                               GTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGGCTGGCCc              >  2:585246/1‑100 (MQ=1)


                                                                                               GTGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGGCTGGCCA              >  1:8739964/1‑101 (MQ=1)


                                                                                                TGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCAC             >  2:6174928/1‑101 (MQ=1)


                                                                                                TGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCAC             <  1:3295873/101‑1 (MQ=1)


                                                                                                TGAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGGCTGGCCAC             >  2:5980665/1‑101 (MQ=1)


                                                                                                 GAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCAtg            >  1:7764935/1‑99 (MQ=1)


                                                                                                 GAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCACG            >  1:2414190/1‑101 (MQ=1)


                                                                                                 GAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCACG            <  1:4346681/101‑1 (MQ=1)


                                                                                                 GAAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCACG            >  2:2845085/1‑101 (MQ=1)


                                                                                                  AAACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCACGG           >  1:7967682/1‑101 (MQ=1)


                                                                                                   AACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCACGGC          >  2:8715144/1‑101 (MQ=1)


                                                                                                   AACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATAAGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCCCGGGTCTGGCCACGGg          >  2:2623039/1‑100 (MQ=0)


TCTCCGCGCCGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAACCCCCGC....................................................................................................  >  NC_014034/1561908‑1562015


....................................................................................................ACCCCCGCAGCTTACGGAGGTCGCAGATGATACCGGTTCAGGGATATGAGGGTGCGCGCGTCGCGGTGCTGGGGCTCGGGCGCTCGGGTCTGGCCACGGCGGCGGCAT  >  NC_014034/1608059‑1608158

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG