New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_014034 | 1640006 = | 235 (0.520) | 41 (0.090) | 6/198 | 38.1 | 0.10 | intergenic (+86/‑59) | mccB/mccA | methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha |
? | NC_014034 | 2950674 = | 502 (1.100) | intergenic (+17/‑143) | RCAP_rcc02761/RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein | |||||
Rejected: Position hash score below cutoff. |
GGCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGC..................................................................................................... < NC_014034/1640106‑1640006
....................................................................................................CTG.CCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCCGGGGGTGAATTTGCCGTCAGGCAAAGAGGGG > NC_014034/2950674‑2950773
GCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCT < 2:2777158/101‑1 (MQ=1)
CGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG < 2:335136/101‑1 (MQ=1)
GATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.C < 1:7663735/101‑1 (MQ=1)
ATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CC < 2:3893010/101‑1 (MQ=1)
ttccgatctTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCC < 1:5234125/92‑1 (MQ=0)
CTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCC < 1:6809132/101‑1 (MQ=1)
TCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCC < 2:7477829/101‑1 (MQ=1)
TCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCC < 1:5511059/101‑1 (MQ=1)
CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGGGGCG.CCCCCc > 1:443217/1‑100 (MQ=0)
CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCc < 2:8860917/101‑2 (MQ=1)
CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCc < 2:5499570/101‑2 (MQ=1)
CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCc < 2:363259/101‑2 (MQ=1)
CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCc < 2:1920138/101‑2 (MQ=1)
GGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGGGGGGGGGGCTG.GCCCCcc > 2:3326771/1‑99 (MQ=0)
GGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGGGCGG.GCCCCcc > 1:2095247/1‑99 (MQ=0)
GGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcg < 1:6838181/101‑3 (MQ=1)
GGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcg < 2:609348/101‑3 (MQ=1)
GCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgg < 2:5476466/101‑4 (MQ=1)
GCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgg < 2:3298667/101‑4 (MQ=1)
GCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgg < 2:2067820/101‑4 (MQ=1)
GCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgg < 1:569194/101‑4 (MQ=1)
GCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgg < 1:702756/101‑4 (MQ=1)
CCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcggg < 1:3331918/101‑5 (MQ=1)
CCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgggc < 1:4755199/101‑6 (MQ=1)
TGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgggccc < 1:2532778/101‑8 (MQ=1)
TGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgggccc < 1:9019973/101‑8 (MQ=1)
TGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgggccc < 1:2895380/101‑8 (MQ=1)
GTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTTCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgggcccc < 2:4430988/101‑9 (MQ=1)
GTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgggcccc < 2:7167654/101‑9 (MQ=1)
GTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgggcccc < 2:6341586/101‑9 (MQ=1)
TTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCC < 2:6660280/101‑1 (MQ=1)
TTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCC < 2:5186039/101‑1 (MQ=1)
TTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCC < 1:6833183/101‑1 (MQ=1)
TGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCc < 1:3753709/101‑2 (MQ=1)
TGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCc < 1:4669757/101‑2 (MQ=1)
GGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCcg < 2:4604251/101‑3 (MQ=1)
GGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCcg < 2:5697603/101‑3 (MQ=1)
GGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCcg < 1:4180200/101‑3 (MQ=1)
GGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCcg < 2:3123419/101‑3 (MQ=1)
GGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCcg < 2:1786101/101‑3 (MQ=1)
GGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCcg < 1:6730686/101‑3 (MQ=1)
GGCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGC..................................................................................................... < NC_014034/1640106‑1640006
....................................................................................................CTG.CCCCCGGACCCCCGGGATATTTGAGGCAAGATGAAACACGCCCCTTTCATCTTGCCCCAAATATCCCGGGGGTGAATTTGCCGTCAGGCAAAGAGGGG > NC_014034/2950674‑2950773
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 32 ≤
ATCG
< 35 ≤
ATCG
< 37 ≤
ATCG
|