New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1699978 =	130 (0.470)	10 (0.040)	2/120	33.6	0.08	coding (1459/1467 nt)	purF	amidophosphoribosyltransferase
	?	NC_014034	= 2995646	99 (0.220)					intergenic (+186/+34)	RCAP_rcc02802/RCAP_rcc02803	membrane dipeptidase/hypothetical protein
Rejected: Position hash score below cutoff.

CGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATG.A.............................................  <  NC_014034/1700045‑1699978 .............................................................................................................CCGCG  <  NC_014034/2995646‑2995642                                                                      ||||||||||||||||||||||||||||||||||||||||      CGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGC               <  2:8136432/101‑1 (MQ=0)  GACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCC              <  1:4967174/101‑1 (MQ=0)   gCGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCG             <  1:5387878/100‑1 (MQ=0)   ACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCG             <  2:8036081/101‑1 (MQ=0)   ACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCG             <  1:62784/101‑1 (MQ=0)   ACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCG             <  1:9012168/101‑1 (MQ=0)    CGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGA            <  2:6322363/101‑1 (MQ=0)     GCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAG           >  1:7113376/1‑101 (MQ=0)     GCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAG           <  1:8809196/101‑1 (MQ=0)      CCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGG          <  2:4335979/101‑1 (MQ=0)       CTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGC         <  2:2079774/101‑1 (MQ=0)        TGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCG        <  2:3043356/101‑1 (MQ=0)        TGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCG        <  2:1707357/101‑1 (MQ=0)         GTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGA       >  2:5895736/1‑101 (MQ=0)         GTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGA       >  2:5020368/1‑101 (MQ=0)          TTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGAC      >  2:1848004/1‑101 (MQ=0)           TTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGAac     >  2:919780/1‑99 (MQ=0)           TTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACC     <  1:42341/101‑1 (MQ=0)            TCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCc    >  1:8040650/1‑100 (MQ=0)            TCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCc    <  1:3954067/101‑2 (MQ=0)            TCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGGATTTCGCCTCGGCTGACGCCGAGGCGACCc    >  1:4606332/1‑100 (MQ=0)             CTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCcg   <  1:7817913/101‑3 (MQ=0)             CTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCcg   <  1:3602119/101‑3 (MQ=0)              cCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCcgg  <  1:6830421/100‑4 (MQ=2)              TCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCcgg  <  1:8491094/101‑4 (MQ=2)              TCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATGAAGGGCTGAGGGGGTATTTCGCCTCGGCTGACGCCGAGGCGACCcgg  <  1:4736742/101‑4 (MQ=2)                                                                      ||||||||||||||||||||||||||||||||||||||||      CGACGCCTGTTTCTCGGGCGATTATCCGGTGAAGCCCTCCGATCAGATCGGCAAGGGCTTCAAGATG.A.............................................  <  NC_014034/1700045‑1699978 .............................................................................................................CCGCG  <  NC_014034/2995646‑2995642 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG