New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1723285 =297 (0.760)3 (0.010) 2/170 39.7 0.01 intergenic (‑540/+888) infC/fpr translation initiation factor IF/ferredoxin‑‑NADP reductase
?NC_014034 = 1723914 300 (0.650)intergenic (‑1169/+259) infC/fpr translation initiation factor IF/ferredoxin‑‑NADP reductase
Rejected: Position hash score below cutoff.

GGGCAGCTTCAGCGGCCGGGGCTTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGGGCAGCTTCCGCAGCCGGGGCCTCGGCGGCCGGAGCTTCGACAGCCGG...................................................................................................  <  NC_014034/1723399‑1723285
....................................................................................................AGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGC  <  NC_014034/1723914‑1723816
                                                                                                                                                                                                                      
                                                                                              GGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGAAGCTTCCGCAGCCGGGGCTTCAGAGGCCG                     >  2:2032746/1‑101 (MQ=0)
                                                                                                 CGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGCGCAGCTTCCGCAGCCGGGGCTACAGCGGCCGGAG                  >  2:2774086/1‑101 (MQ=0)
                                                                                                  GGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGC                 >  2:8020245/1‑101 (MQ=1)
                                                                                                                                                                                                                      
GGGCAGCTTCAGCGGCCGGGGCTTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGGGCAGCTTCCGCAGCCGGGGCCTCGGCGGCCGGAGCTTCGACAGCCGG...................................................................................................  <  NC_014034/1723399‑1723285
....................................................................................................AGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGC  <  NC_014034/1723914‑1723816

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 26 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG