BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1732710 =	163 (0.390)	156 (0.370)	57/184	13.9	0.53	intergenic (‑134/‑269)	RCAP_rcc01601/tgt	FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
*	?	NC_014034	= 2330175	109 (0.240)	156 (0.370)	57/184	13.9	0.53	intergenic (+150/+162)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 229 total aligned reads displayed.


AAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGC............................................................................................................  <  NC_014034/1732809‑1732710


............................................................................................................CGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  <  NC_014034/2330175‑2330076


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AAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG                                                                                                             >  2:9010912/1‑101 (MQ=1)


AAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG                                                                                                             >  1:3952828/1‑101 (MQ=1)


AAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG                                                                                                             >  2:7519043/1‑101 (MQ=1)


AAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCG                                                                                                             >  2:6027553/1‑101 (MQ=1)


 AGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGG                                                                                                            <  1:879279/101‑1 (MQ=1)


 AGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGG                                                                                                            >  2:7885075/1‑101 (MQ=1)


 AGCGCGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGG                                                                                                            <  1:4233875/101‑1 (MQ=1)


  GCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGA                                                                                                           <  1:7040641/101‑1 (MQ=1)


   CGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG                                                                                                          >  2:1375194/1‑101 (MQ=1)


   CGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG                                                                                                          >  1:1369505/1‑101 (MQ=1)


   CGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAG                                                                                                          >  2:6938967/1‑101 (MQ=1)


   CGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGGGCGGGGGCGGAG                                                                                                          >  1:4611046/1‑101 (MQ=1)


    GGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGC                                                                                                         >  1:7801181/1‑101 (MQ=1)


    GGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGC                                                                                                         >  1:8985190/1‑101 (MQ=1)


    GGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGC                                                                                                         >  2:7589090/1‑101 (MQ=1)


     GGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCC                                                                                                        >  1:6100668/1‑101 (MQ=1)


     GGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCC                                                                                                        <  2:56048/101‑1 (MQ=1)


     GGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCC                                                                                                        >  1:3664427/1‑101 (MQ=1)


     GGGCCCTGGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCC                                                                                                        <  2:4256321/101‑1 (MQ=1)


      GGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCC                                                                                                       >  1:6674024/1‑101 (MQ=1)


       GCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCC                                                                                                      >  2:3182732/1‑101 (MQ=1)


       GCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCC                                                                                                      >  1:8292914/1‑101 (MQ=1)


        CCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCC                                                                                                     <  1:6891041/101‑1 (MQ=1)


        CCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCC                                                                                                     >  1:541478/1‑101 (MQ=1)


         CCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCG                                                                                                    >  2:4584228/1‑101 (MQ=1)


           TTGCCTGTTGGCGCGGACGGCATGCGGCTGCAGGGGGGCCTGGGCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCC                                                                                                  <  1:7347450/101‑1 (MQ=0)


            TGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCC                                                                                                 >  2:822216/1‑101 (MQ=1)


            TGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCC                                                                                                 <  2:2783482/101‑1 (MQ=1)


            TGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCCGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCC                                                                                                 >  2:2996280/1‑101 (MQ=1)


             GCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCG                                                                                                >  2:7315092/1‑101 (MQ=1)


             GCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGGGCGGGGGCGGGGGCCCCGCCCG                                                                                                >  1:7416958/1‑101 (MQ=0)


              CCTGTTGACGGGGACGGCAGGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGG                                                                                               <  2:6851091/101‑1 (MQ=0)


               CTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGG                                                                                              >  1:998942/1‑101 (MQ=1)


               CTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGG                                                                                              >  1:4906884/1‑101 (MQ=1)


                TGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGT                                                                                             >  2:5163984/1‑101 (MQ=1)


                 GTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTC                                                                                            >  1:7103672/1‑101 (MQ=1)


                 GTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTC                                                                                            >  2:8867838/1‑101 (MQ=1)


                   TGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGC                                                                                          >  1:1145338/1‑101 (MQ=1)


                   TGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGGCGC                                                                                          >  1:1007010/1‑101 (MQ=1)


                       GCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCG                                                                                      >  2:612313/1‑101 (MQ=1)


                         GGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGgc                                                                                    >  1:7573093/1‑99 (MQ=1)


                          GACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGgcc                                                                                   >  1:4733147/1‑98 (MQ=1)


                          GACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGgcc                                                                                   >  2:2308389/1‑98 (MQ=1)


                          GACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGgcc                                                                                   >  1:3176350/1‑98 (MQ=1)


                            CGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGGCGCCGCGgcccc                                                                                 >  2:7940752/1‑96 (MQ=0)


                                ATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGgccccgccg                                                                             >  2:2769005/1‑92 (MQ=0)


                                ATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGgccccgccg                                                                             >  2:8348333/1‑92 (MQ=0)


                                ATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGgccccgccg                                                                             >  2:8710226/1‑92 (MQ=0)


                                 TGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGgccccgccgc                                                                            >  1:4379799/1‑91 (MQ=0)


                                                           ccggctttTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGAT                                                  <  1:8232122/93‑1 (MQ=11)


                                                             ggctttgcCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCC                                                <  2:1600435/93‑1 (MQ=9)


                                                               ctttTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGT                                              >  2:2123358/5‑101 (MQ=11)


                                                                tttTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTG                                             >  1:2247517/4‑101 (MQ=1)


                                                                tttTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTG                                             >  1:6726000/4‑101 (MQ=1)


                                                                tttTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTG                                             >  2:1971050/4‑101 (MQ=1)


                                                                tttTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGGCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGgg                                             >  2:1422892/4‑99 (MQ=1)


                                                                  tTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCG                                           >  2:4738162/2‑101 (MQ=1)


                                                                   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  1:487212/1‑101 (MQ=1)


                                                                   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  1:2334390/1‑101 (MQ=1)


                                                                   TTCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGG                                          >  2:3910292/1‑101 (MQ=1)


                                                                    TCTTGGCGCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGC                                         >  1:8961108/1‑101 (MQ=1)


                                                                         GCGCAAATACGCCGGGGGTGCGGGGGCGGACCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCT                                    <  1:7394452/101‑1 (MQ=1)


                                                                           GCAAATCCGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGC                                  <  2:5909521/101‑1 (MQ=1)


                                                                           GCAAATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGC                                  <  2:3005528/101‑1 (MQ=1)


                                                                              AATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCG                               >  1:5176103/1‑101 (MQ=1)


                                                                              AATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCG                               >  2:5053228/1‑101 (MQ=1)


                                                                               ATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGC                              >  2:7011939/1‑101 (MQ=1)


                                                                               ATACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGGCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGGGCTCTGCGCGC                              >  2:8495979/1‑101 (MQ=0)


                                                                                TACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCC                             >  2:3662030/1‑101 (MQ=1)


                                                                                TACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCC                             >  2:328287/1‑101 (MQ=1)


                                                                                TACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCACTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCC                             >  1:8134796/1‑101 (MQ=1)


                                                                                 ACGCCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCG                            >  2:678814/1‑101 (MQ=1)


                                                                                 ACGCCGGGGGTGCGGGGGCGGAGCCACCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCG                            >  2:1694265/1‑101 (MQ=1)


                                                                                    CCGGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTG                         >  1:3299308/1‑101 (MQ=1)


                                                                                      GGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCC                       >  1:9201157/1‑101 (MQ=1)


                                                                                      GGGGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCC                       >  2:8294654/1‑101 (MQ=1)


                                                                                        GGGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGC                     >  1:2634872/1‑101 (MQ=1)


                                                                                         GGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCC                    >  2:286078/1‑101 (MQ=1)


                                                                                         GGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCC                    >  1:5686942/1‑101 (MQ=1)


                                                                                         GGTGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCC                    >  2:1120287/1‑101 (MQ=1)


                                                                                           gggGGGGGGGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCT                  <  1:3512954/98‑1 (MQ=0)


                                                                                           gGCGGGGGCGGACCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCT                  <  2:462721/100‑1 (MQ=1)


                                                                                           TGCGGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCT                  <  1:3020050/101‑1 (MQ=1)


                                                                                              GGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGG               >  2:4970720/1‑101 (MQ=1)


                                                                                              GGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGG               >  2:3396214/1‑101 (MQ=1)


                                                                                              GGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGG               >  1:2828120/1‑101 (MQ=1)


                                                                                              GGGGGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGG               >  1:6383029/1‑101 (MQ=1)


                                                                                                 gggggcGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGG            <  1:4104406/95‑1 (MQ=11)


                                                                                                 GGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGG            >  1:9048058/1‑101 (MQ=1)


                                                                                                 GGCGGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGG            >  1:2389370/1‑101 (MQ=1)


                                                                                                    GGAGCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGG         >  2:3619556/1‑101 (MQ=1)


                                                                                                      ccCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCC       <  1:8501442/99‑1 (MQ=1)


                                                                                                       GCCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCA      >  2:411591/1‑101 (MQ=1)


                                                                                                        CCCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAA     >  1:6332450/1‑101 (MQ=1)


                                                                                                         CCCCGCCGGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAG    <  2:7128781/101‑1 (MQ=1)


                                                                                                         CCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAG    >  1:6937821/1‑101 (MQ=1)


                                                                                                         CCCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGACAAG    >  2:2397268/1‑101 (MQ=1)


                                                                                                          CCCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGC   <  1:1800644/101‑1 (MQ=1)


                                                                                                           CCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  >  1:4525600/1‑101 (MQ=1)


                                                                                                           CCGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  <  1:8081452/101‑1 (MQ=1)


                                                                                                    ||||||||


AAGCGGGGCCCTTGCCTGTTGACGCGGACGGCATGCGGCTGCAGGGGGGCCTGGTCCCGCTTGTTTCTTCTTGGCGCAAATACGCCGGGGGTGCGGGGGC............................................................................................................  <  NC_014034/1732809‑1732710


............................................................................................................CGCCCGGGTCGCCGCGCCTGCGCGGCGAAATTCCTCTCCGCCATCGGCCGATCCGTGCGGCGCTCTGCGCGCCGTTGCCGCCCTTGGCGGAGGCCAAGCC  <  NC_014034/2330175‑2330076

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG