New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2070638	119 (0.260)	22 (0.050)	7/198	37.2	0.19	intergenic (+53/+119)	dcd/guaB	deoxycytidine triphosphate deaminase/inosine‑5'‑monophosphate dehydrogenase
	?	NC_014034	= 2185977	70 (0.150)					intergenic (+250/‑255)	mtlK/RCAP_rcc02028	mannitol 2‑dehydrogenase/FeoA family protein
Rejected: Position hash score below cutoff.

TATCAGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGG.....................................................................................................  >  NC_014034/2070538‑2070638 ....................................................................................................GGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAA.GGGGCGGTTCGGCGTTTCTTGTGCCATCAAAAACAAGGCCTTCGGGGCAAGCCGCTG  <  NC_014034/2185977‑2185878                                                                                                                                                                                                             ATCAGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGG                                                                                                      >  1:8303996/1‑101 (MQ=40)  ATCAGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGG                                                                                                      >  2:4010439/1‑101 (MQ=40)  ATCAGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCCGGGGG                                                                                                      >  2:1815675/1‑101 (MQ=255)    CAGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGcg                                                                                                    >  1:7884152/1‑99 (MQ=39)    CAGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGGg                                                                                                    >  1:4066436/1‑100 (MQ=40)    CAGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGGg                                                                                                    >  2:5344648/1‑100 (MQ=40)     AGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGGgg                                                                                                   >  2:4688405/1‑99 (MQ=39)     AGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGGgc                                                                                                   >  2:7216686/1‑99 (MQ=39)        GCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGcgggcc                                                                                                >  2:4648972/1‑95 (MQ=19)        GCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGcgcggc                                                                                                >  2:8081841/1‑95 (MQ=19)        GCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGGggggg                                                                                                >  1:4680578/1‑96 (MQ=25)         CCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGGgccgcc                                                                                               >  2:8570442/1‑95 (MQ=19)           AGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGGGGggcggccc                                                                                             >  2:899125/1‑93 (MQ=12)              GGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCC.GGGGGGCGCCGCCCCCcc                                                                                         >  2:1372389/1‑99 (MQ=2)                                                                                                   GGGGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAAGGGGGCGGTTCGGCGTTTCTTGTGCCATC.AAAACAAGGCCTTCGGGGCAAGCCGC    >  2:2869756/1‑101 (MQ=0)                                                                                                   GGGGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAAGGGGGCGGTTCGGCGTTTCTTGTGCCATC.AAAACAAGGCCTTCGGGGCAAGCCGC    >  2:5437737/1‑101 (MQ=0)                                                                                                   GGGGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAAGGGGGCGGTTCGGCGTTTCTTGTGCCATC.AAAACAAGGCCTTCGGGGCAAGCCGC    >  2:6178695/1‑101 (MQ=0)                                                                                                   GGGGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAAGGGGGCGGTTCGGCGTTTCTTGTGCCATC.AAAACAAGGCCTTCGGGGCAAGCCGC    >  1:7532949/1‑101 (MQ=0)                                                                                                   GGGGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAAGGGGGCGGTTCGGCGTTTCTTGTGCCATC.AAAACAAGGCCTTCGGGGCAAGCCGC    >  1:587127/1‑101 (MQ=0)                                                                                                   GGGGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAAGGGGGCGGTTCGGCGTTTCTTGTGCCATC.AAAACAAGGCCTTCGGGGCAAGCCGC    >  1:1773115/1‑101 (MQ=0)                                                                                                    GGGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAAGGGGGCGGTTCGGCGTTTCTTGTGCCATC.AAAACAAGGCCTTCGGGGCAAGCCGCT   >  2:753010/1‑101 (MQ=0)                                                                                                    GGGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAAGGGGGCGGTTCGGCGTTTCTTGTGCCATC.AAAACAAGGCCTTCGGGGCAAGCCGCT   <  1:5106648/101‑1 (MQ=0)                                                                                                                                                                                                            TATCAGGGCCAGGGGCTGAAGCTCGCCAAGCATTTCCGCGCGGGGTGAGGGGCGCGCGGATGGATTTCGCCGCGGCTTTGCCTGCGGCGACCCGCCGGGGG.....................................................................................................  >  NC_014034/2070538‑2070638 ....................................................................................................GGGCTCCGCCCCCGGACCCCCGGGATATTTGAGCCAAGGTGAAA.GGGGCGGTTCGGCGTTTCTTGTGCCATCAAAAACAAGGCCTTCGGGGCAAGCCGCTG  <  NC_014034/2185977‑2185878 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG