New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2070640 =	107 (0.230)	15 (0.030)	8/198	36.4	0.09	intergenic (+55/+117)	dcd/guaB	deoxycytidine triphosphate deaminase/inosine‑5'‑monophosphate dehydrogenase
	?	NC_014034	2330295 =	184 (0.400)					intergenic (+270/+42)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGC............................................................................................  <  NC_014034/2070739‑2070640 ....................................................................................................GGCCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGA  >  NC_014034/2330295‑2330386                                                                                                                                                                                                  cgCAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCG                                                                                             <  2:2795335/99‑1 (MQ=1)          CGGGGGAAACCCCGGCCCTTTTTCCGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGC                                                                                    >  2:4385876/1‑101 (MQ=11)           GGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCG                                                                                   >  2:1714951/1‑101 (MQ=1)            GGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGG                                                                                  >  1:2395172/1‑101 (MQ=11)            GGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGG                                                                                  >  1:8002855/1‑101 (MQ=11)             GGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGG                                                                                 >  1:2617972/1‑101 (MQ=14)             GGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGG                                                                                 >  1:8082190/1‑101 (MQ=14)              GGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGg                                                                                >  2:301704/1‑100 (MQ=14)                AAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGggg                                                                              >  2:4066321/1‑98 (MQ=9)                 AACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGTAGCGCCCCCCGGCGGcgcgc                                                                             >  1:5634617/1‑96 (MQ=255)                 AACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGgggc                                                                             >  1:1798762/1‑97 (MQ=9)                 AACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGGCGg                                                                             >  2:1588664/1‑100 (MQ=9)                 AACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGGCGC                                                                             >  2:4059586/1‑101 (MQ=12)                  ACCGCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGGCGgc                                                                            >  1:8792434/1‑99 (MQ=255)                   CCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGCGCCCCCCGGCGGGGGGCCG                                                                           >  1:6781203/1‑101 (MQ=9)                                                                                           cGGGGGCGGC.GCCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGA  <  1:304192/100‑1 (MQ=1)                                                                                                                                                                                                  CACAAGGGCCGGGGGAAACCCCGGCCCTTTTTCTGTGTACCGGCAAACACCGCTTCCCCTTCATCTTGCCGAAAATATCCCGGGGGGTCCGGGGGGCAGC............................................................................................  <  NC_014034/2070739‑2070640 ....................................................................................................GGCCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGA  >  NC_014034/2330295‑2330386 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG