New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 221956 =533 (1.440)95 (0.260) 29/162 20.9 0.15 coding (701/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222080 568 (1.240)coding (577/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 171 total aligned reads displayed.

CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC....................................................................................................................  <  NC_014034/222029‑221956
.............................................................................................ACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACC  <  NC_014034/222080‑221984
                                                                          |||||||||||||||||||                                                                                                 
gatctGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCC                                                                                           <  2:4387566/96‑1 (MQ=0)
CCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCC                                                                                           >  2:866299/1‑101 (MQ=0)
CCCACGGACCCGACCGCTCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCC                                                                                           <  2:7681473/101‑1 (MQ=0)
CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCC                                                                                           >  2:6875543/1‑101 (MQ=25)
CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCC                                                                                           >  2:4062153/1‑101 (MQ=25)
CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCC                                                                                           <  1:3069501/101‑1 (MQ=21)
CCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCC                                                                                           >  2:6013512/1‑101 (MQ=9)
CCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCC                                                                                           >  1:5219730/1‑101 (MQ=9)
 CCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCG                                                                                          >  1:7430658/1‑101 (MQ=0)
 CCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCa                                                                                          >  2:4701938/1‑100 (MQ=12)
 CCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCG                                                                                          <  1:481174/101‑1 (MQ=12)
 CCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCG                                                                                          <  1:1196741/101‑1 (MQ=12)
  CACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGA                                                                                         <  1:2054873/101‑1 (MQ=0)
  CACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGA                                                                                         <  1:6432448/101‑1 (MQ=0)
  CACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGA                                                                                         <  2:106426/101‑1 (MQ=0)
  CACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACGGACCCCACGGACCCGA                                                                                         >  1:7382549/1‑101 (MQ=12)
   gCGGCCCCGACCGATCCCACGGATCCCACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGAC                                                                                        <  1:866312/100‑1 (MQ=12)
   cCGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGAC                                                                                        <  1:3222319/100‑1 (MQ=0)
   ACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGAC                                                                                        >  1:8103153/1‑101 (MQ=0)
   ACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGAC                                                                                        <  1:6709109/101‑1 (MQ=0)
    ccGACCCGACCGATCCCACGGACCCGACCGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACC                                                                                       <  2:5054563/99‑1 (MQ=0)
    CGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACC                                                                                       >  1:5281608/1‑101 (MQ=0)
    CGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACC                                                                                       <  2:4796678/101‑1 (MQ=2)
    CGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACC                                                                                       <  1:7615256/101‑1 (MQ=2)
    CGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACC                                                                                       <  1:7764942/101‑1 (MQ=2)
    CGGACCCGCCCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACC                                                                                       <  2:3375352/101‑1 (MQ=12)
    CGGACCCGCCCGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACC                                                                                       <  2:5249680/101‑1 (MQ=2)
    CGGACCCGACCGATCCCACGGCCCCGCCCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACC                                                                                       <  2:3308840/101‑1 (MQ=2)
    CGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACC                                                                                       <  1:1270657/101‑1 (MQ=21)
    CGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACC                                                                                       <  1:8270719/101‑1 (MQ=21)
    CGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACGGATCCCACGGACCCGACGGATCCAACGGACCCGACg                                                                                       >  2:5640162/1‑100 (MQ=2)
    CGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGCCCCGACCGATCCCACGCACCCGACC                                                                                       >  1:5893933/1‑101 (MQ=2)
    CGGACCCGACCGAGCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACC                                                                                       <  2:2467573/101‑1 (MQ=0)
     GGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCG                                                                                      >  2:6706151/1‑101 (MQ=2)
     GGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCG                                                                                      >  2:1023221/1‑101 (MQ=9)
     GGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCG                                                                                      >  2:175059/1‑101 (MQ=255)
     GGAGCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCG                                                                                      <  2:7649762/101‑1 (MQ=9)
     GGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCG                                                                                      <  2:3592206/101‑1 (MQ=12)
     GGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACgg                                                                                      >  2:9067413/1‑99 (MQ=2)
     GGACCCGACCGATCCCACGGACCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCG                                                                                      <  2:2003611/101‑1 (MQ=12)
     GGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCGCACGGACCCGACCGATCCCACGCACCCGACCG                                                                                      >  2:6708841/1‑101 (MQ=255)
      GACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGA                                                                                     >  1:1847818/1‑101 (MQ=12)
      GACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACCGATCCCACGGACCCGACCGA                                                                                     >  1:1749269/1‑101 (MQ=0)
      GACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCTACCca                                                                                     >  1:5989885/1‑99 (MQ=0)
      GACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGACGCCACGGACCCGACCGA                                                                                     >  2:5230047/1‑101 (MQ=0)
      GACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGACCCCACGGACCCCACCGA                                                                                     >  1:8494092/1‑101 (MQ=2)
       gCCCGACCGATCCCACGGATCCCACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACGGAc                                                                                    <  2:826833/100‑2 (MQ=2)
       atCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGAc                                                                                    >  1:3824268/3‑100 (MQ=2)
       ACCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGAc                                                                                    >  2:6394380/1‑100 (MQ=0)
         CCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGCTCC                                                                                  >  1:4386916/1‑101 (MQ=255)
          CGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCCATCCc                                                                                 >  1:8119276/1‑100 (MQ=255)
           GACCGATCCCACGGATCCGCCGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCca                                                                                <  2:7093476/101‑3 (MQ=255)
           GACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGCCCGATCCca                                                                                >  1:5296988/1‑99 (MQ=255)
              CGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCAACGG                                                                             >  2:8650336/1‑101 (MQ=255)
                  CCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACAGATCCCACGGACCCGACCGATCCGACGGACCC                                                                         >  1:6102236/1‑101 (MQ=0)
                   CCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGAGCCGACGGACCCG                                                                        <  1:6600414/101‑1 (MQ=0)
                           CCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCC                                                                <  2:7988684/101‑1 (MQ=12)
                            CGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGCCGGAACCGACCGATCCC                                                               >  2:1861633/1‑101 (MQ=0)
                                  ATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACCGATCCGACGGACCCGACCGATCCCACGGcc                                                         >  1:6722458/1‑99 (MQ=12)
                                    CCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGAGCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCC                                                       <  2:7970243/101‑1 (MQ=12)
                                                ACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                                           <  2:4584425/101‑1 (MQ=9)
                                                      CCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACAGACCC                                     >  2:8800581/1‑101 (MQ=0)
                                                          CGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACC                                 >  1:406272/1‑101 (MQ=0)
                                                           GGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACCG                                >  1:2192782/1‑101 (MQ=0)
                                                                            CGGACCCGCCCGATCCTACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACC               <  2:4482230/101‑1 (MQ=0)
                                                                             GGACCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCG              <  2:4667487/101‑1 (MQ=12)
                                                                               ACCCGACCGATCCCACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGAT            <  2:6544056/101‑1 (MQ=0)
                                                                                tCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATC           <  1:1015247/100‑1 (MQ=9)
                                                                                 CCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCC          >  1:2859823/1‑101 (MQ=0)
                                                                                 CCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCC          <  1:758592/101‑1 (MQ=0)
                                                                                 CCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCC          >  1:3627553/1‑101 (MQ=12)
                                                                                  CGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC         >  1:7964233/1‑101 (MQ=0)
                                                                                  CGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC         <  1:1579557/101‑1 (MQ=0)
                                                                                  CGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC         <  1:2665590/101‑1 (MQ=12)
                                                                                  CGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC         <  1:7502297/101‑1 (MQ=12)
                                                                                  CGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC         <  2:8268737/101‑1 (MQ=12)
                                                                                   GACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCA        <  1:1399625/101‑1 (MQ=0)
                                                                                   GACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCA        >  1:1311724/1‑101 (MQ=0)
                                                                                   GACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCA        >  2:1457796/1‑101 (MQ=12)
                                                                                   GACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCA        <  2:7267219/101‑1 (MQ=12)
                                                                                    ACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC       <  1:929212/101‑1 (MQ=12)
                                                                                    ACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC       >  2:4729091/1‑101 (MQ=12)
                                                                                    ACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC       <  2:7318645/101‑1 (MQ=12)
                                                                                     CCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG      >  2:8344571/1‑101 (MQ=0)
                                                                                     CCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG      <  1:8975112/101‑1 (MQ=0)
                                                                                     CCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG      <  1:9065834/101‑1 (MQ=0)
                                                                                     CCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG      <  2:2359939/101‑1 (MQ=0)
                                                                                     CCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG      <  2:7494847/101‑1 (MQ=0)
                                                                                     CCGATCCGACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG      <  1:3095018/101‑1 (MQ=0)
                                                                                     CCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG      <  2:6417845/101‑1 (MQ=12)
                                                                                      CGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG     <  1:6874031/101‑1 (MQ=0)
                                                                                      CGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG     <  1:2624905/101‑1 (MQ=12)
                                                                                      CGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG     <  1:8447286/101‑1 (MQ=12)
                                                                                      CGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG     <  1:8628114/101‑1 (MQ=12)
                                                                                       GATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA    >  1:3523669/1‑101 (MQ=0)
                                                                                       GATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA    >  1:4905321/1‑101 (MQ=0)
                                                                                       GATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA    >  2:582982/1‑101 (MQ=12)
                                                                                        ATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAt   <  2:354217/101‑2 (MQ=2)
                                                                                        ATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAC   >  2:5480706/1‑101 (MQ=2)
                                                                                         TCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAtc  <  2:1311692/101‑3 (MQ=9)
                                                                          |||||||||||||||||||                                                                                                 
CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC....................................................................................................................  <  NC_014034/222029‑221956
.............................................................................................ACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACC  <  NC_014034/222080‑221984

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG