New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 222079 =699 (1.770)0 (0.000) 2/172 39.9 0.00 coding (578/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222114 447 (0.980)coding (543/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

GGCCGGTCTGGCCGGCCTGGGTCTGTCCGGCGGCGGCGACAGCGGTCCGACCGATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGAC..............................................................................................  <  NC_014034/222192‑222079
....................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGAC  <  NC_014034/222114‑222021
                                                                                                                                                                                                                
                 TGGGTCTGTCCGGCGGCGGCGACAGCGGTCCGACCGATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGAc                                                                                            >  2:1509637/1‑100 (MQ=1)
                    GTCTGTCCGGCGGCGGCGACAGCGGTCCGACCGATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACCGACCCGACGGATCCC                                                                                         >  2:8601239/1‑101 (MQ=0)
                                                                                                                                                                                                                
GGCCGGTCTGGCCGGCCTGGGTCTGTCCGGCGGCGGCGACAGCGGTCCGACCGATCCCACCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGAC..............................................................................................  <  NC_014034/222192‑222079
....................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGAC  <  NC_014034/222114‑222021

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 37 ≤  ATCG