New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 26009490 (0.000)142 (0.330) 14/190 31.5 0.37 intergenic (+11/‑130) RCAP_rcc02424/surE short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
?NC_014034 3609076 = 479 (1.050)intergenic (+15/‑156) clpB/dinB chaperone ClpB/DNA polymerase IV
Rejected: Position hash score below cutoff.

Only 100 of 142 total aligned reads displayed.

CACCGCCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGG....................................  >  NC_014034/2600845‑2600949
....................................................................................................GGGGGCTCTGCCCCC..GCTTCGCTCCCCCCGGGATATTTG  >  NC_014034/3609076‑3609109
                                                                                                                                             
     CCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGC                                     <  2:6986121/101‑1 (MQ=1)
      CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                    <  1:1431109/101‑1 (MQ=1)
      CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                    >  2:7627603/1‑101 (MQ=1)
      CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                    <  2:7673232/101‑1 (MQ=1)
      CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                    <  1:2785286/101‑1 (MQ=1)
      CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                    <  1:6271234/101‑1 (MQ=1)
      CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                    <  2:7953498/101‑1 (MQ=1)
      CGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCT                                    >  2:4795426/1‑101 (MQ=1)
       GTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTC                                   >  1:5877879/1‑101 (MQ=1)
       GTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTC                                   <  2:8421623/101‑1 (MQ=1)
       GTGCGGGCGAGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGACGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTC                                   >  2:5954189/1‑101 (MQ=0)
        TGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCT                                  <  2:3749003/101‑1 (MQ=1)
        TGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCT                                  <  1:1655144/101‑1 (MQ=1)
        TGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCT                                  <  2:3559821/101‑1 (MQ=1)
         GCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTG                                 >  1:8425314/1‑101 (MQ=1)
          CGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGC                                <  1:3773030/101‑1 (MQ=1)
          CGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGC                                >  2:1004352/1‑101 (MQ=1)
           GGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCC                               >  2:7772175/1‑101 (MQ=1)
           GGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCC                               <  2:621595/101‑1 (MQ=1)
           GGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCC                               >  1:472759/1‑101 (MQ=1)
           GGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCC                               <  2:8807838/101‑1 (MQ=1)
           GGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCC                               >  1:5956494/1‑101 (MQ=1)
             GCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCC                             <  2:3901132/101‑1 (MQ=1)
              CGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCC                            <  2:7828159/101‑1 (MQ=1)
               GCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCc                           <  1:1249249/101‑2 (MQ=1)
                CGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcg                          <  2:8055236/101‑3 (MQ=1)
                CGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcg                          <  2:4354662/101‑3 (MQ=1)
                CGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcg                          <  1:2919224/101‑3 (MQ=1)
                  CTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggc                        >  1:8476933/1‑97 (MQ=1)
                   TTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggct                       <  2:7200467/101‑6 (MQ=1)
                   TTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggct                       >  1:490245/1‑96 (MQ=1)
                   TTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggct                       >  1:6749943/1‑96 (MQ=1)
                    TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggctt                      <  2:4260131/101‑7 (MQ=1)
                    TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggctt                      <  2:8184939/101‑7 (MQ=1)
                    TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggctt                      <  1:4724569/101‑7 (MQ=1)
                    TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggctt                      <  2:652219/101‑7 (MQ=1)
                    TCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCACCCcggctt                      >  2:6032553/1‑95 (MQ=1)
                     CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttc                     <  2:1170658/101‑8 (MQ=1)
                     CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttc                     <  2:9083348/101‑8 (MQ=1)
                     CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttc                     <  1:4388327/101‑8 (MQ=1)
                     CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttc                     >  1:6672783/1‑94 (MQ=1)
                     CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttc                     >  2:4270334/1‑94 (MQ=1)
                     CTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttc                     <  2:290671/101‑8 (MQ=1)
                      TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttcg                    <  1:3034324/101‑9 (MQ=1)
                      TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttcg                    <  1:8091691/101‑9 (MQ=1)
                      TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttcg                    <  1:753596/101‑9 (MQ=1)
                      TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttcg                    <  1:43245/101‑9 (MQ=1)
                      TTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttcg                    >  2:7271747/1‑93 (MQ=1)
                       TCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttcgc                   <  2:632594/101‑10 (MQ=1)
                       TCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttcgc                   >  2:2071652/1‑92 (MQ=1)
                       TCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCcggcttcgc                   <  1:696641/101‑10 (MQ=1)
                          CGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCC                <  1:8170540/101‑1 (MQ=1)
                          CGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCC                <  2:4787898/101‑1 (MQ=1)
                           GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCC               >  2:1607806/1‑101 (MQ=1)
                           GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCC               <  1:2132434/101‑1 (MQ=1)
                           GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCC               >  1:9111367/1‑101 (MQ=1)
                           GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCC               >  2:5496969/1‑101 (MQ=1)
                           GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCC               >  2:8302742/1‑101 (MQ=1)
                           GTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCC               <  2:819769/101‑1 (MQ=1)
                            TCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCC              <  1:2690830/101‑1 (MQ=1)
                            TCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCC              >  1:3977035/1‑101 (MQ=1)
                             CCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCC             >  2:3500224/1‑101 (MQ=1)
                             CCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCC             >  2:5011777/1‑101 (MQ=1)
                              CGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCC            <  1:7272051/101‑1 (MQ=1)
                              CGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCC            <  2:7207926/101‑1 (MQ=1)
                              CGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCC            <  2:5329486/101‑1 (MQ=1)
                              CGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCC            <  1:8546992/101‑1 (MQ=1)
                              CGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCC            <  2:3659761/101‑1 (MQ=1)
                               GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCG           <  1:4902211/101‑1 (MQ=1)
                               GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCG           >  1:2808474/1‑101 (MQ=1)
                               GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCG           <  2:8311389/101‑1 (MQ=1)
                               GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCG           >  2:7030112/1‑101 (MQ=1)
                               GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCG           <  1:5892308/101‑1 (MQ=1)
                               GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCG           >  2:9168941/1‑101 (MQ=1)
                               GAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCG           <  2:1618925/101‑1 (MQ=1)
                                gGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGG          <  1:7294011/100‑1 (MQ=1)
                                AGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGa          >  2:6437358/1‑100 (MQ=1)
                                AGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGG          <  1:3057175/101‑1 (MQ=1)
                                AGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGG          >  1:484043/1‑101 (MQ=1)
                                 GGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGG         >  1:8169972/1‑101 (MQ=1)
                                 GGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGG         >  2:480387/1‑101 (MQ=1)
                                 GGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGG         >  2:7457920/1‑101 (MQ=1)
                                  GACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGA        >  2:4654431/1‑101 (MQ=1)
                                   ACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGAT       <  2:6160212/101‑1 (MQ=1)
                                   ACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGAT       <  2:142981/101‑1 (MQ=1)
                                   ACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGAT       <  1:8899293/101‑1 (MQ=1)
                                   ACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGAT       <  1:8368539/101‑1 (MQ=1)
                                   ACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGAT       <  2:8298976/101‑1 (MQ=1)
                                   ACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGAT       <  2:5963514/101‑1 (MQ=1)
                                    CCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATA      <  1:2967133/101‑1 (MQ=1)
                                    CCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATA      <  2:5379592/101‑1 (MQ=1)
                                     CGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATAT     >  1:3313541/1‑101 (MQ=1)
                                     CGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATAT     <  1:5273739/101‑1 (MQ=1)
                                     CGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATAT     >  2:295105/1‑101 (MQ=1)
                                      GCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATATT    <  2:5865662/101‑1 (MQ=1)
                                       CACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATATTT   <  1:5984260/101‑1 (MQ=1)
                                        cCGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATATTTG  <  2:5018410/100‑1 (MQ=1)
                                        ACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATATTTG  >  1:6941351/1‑101 (MQ=1)
                                        ACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATATTTG  >  1:5228516/1‑101 (MQ=1)
                                        ACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGCTCTGCCCCCCGGCTTCGCTCCCCCCGGGATATTTG  <  1:1993516/101‑1 (MQ=1)
                                                                                                                                             
CACCGCCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGG....................................  >  NC_014034/2600845‑2600949
....................................................................................................GGGGGCTCTGCCCCC..GCTTCGCTCCCCCCGGGATATTTG  >  NC_014034/3609076‑3609109

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 39 ≤  ATCG