| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 2755417 = | 529 (1.180) | 8 (0.020) | 8/196 | 36.2 | 0.01 | intergenic (‑361/‑207) | RCAP_rcc02565/RCAP_rcc02566 | hypothetical protein/reverse transcriptase catalytic domain‑containing protein |
| ? | NC_014034 | = 2755557 | 598 (1.310) | intergenic (‑501/‑67) | RCAP_rcc02565/RCAP_rcc02566 | hypothetical protein/reverse transcriptase catalytic domain‑containing protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
TGCCGGATTGCCGCAACGCCGCCCGCGTGGCTGGCGAAAGGAGCCCGAATTATGGAACTCGCGATCTGCACCGCCCCGGAAGCTGGCCTTGACAGTTTAAAC.................................................................................................... < NC_014034/2755518‑2755417
....................................................................................................ACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTATTGCCGGATTGCCGCAACGCCGCCCGCGTGGCTGGCGAAAGGAGCCCGAATTATGGAACTCG < NC_014034/2755557‑2755458
AACGCCGCCCGCGTGGCTGGCGAAAGGAGCCCGAATTATGGAACTCGCGATCTGCACCGCCCCGGAAGCTGGCCTTGACAGTTTAAACGTGGTCGTATACA < 2:1441283/101‑1 (MQ=255)
AGCCCGAATTATGGAACTCGCGATCTGCACCGCCCCGGAAGCTGGCCTTGACAGTTTAAACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTATT > 2:7465869/1‑101 (MQ=255)
GAATTATGGAACTCGCGATCTGCACCGCCCCGGAAGCTGGCCTTGACAGTTTAAACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTGTTGCCGG > 1:5871161/1‑101 (MQ=255)
CACCGCCCCGGAAGCTGGCCTTGACAGTTTAAACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTATTGCCGGATTGCCGCAACGCCGCCCGCGT > 1:848359/1‑101 (MQ=255)
CTGGCCTTGACAGTTTAAACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTATTGCCGGATTGCCGCAACGCCGCCCGCGTGGCTGGCGAAAGGA > 1:8194093/1‑101 (MQ=255)
TGGCCTTGACAGTTTAAACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTATTGCCGGATTGCCGCAACGCCGCCCGCGTGGCTGGCGAAAGtgg > 2:9038867/1‑98 (MQ=255)
TGACAGTTTAAACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTATTGCCGGATTGCCGCAACGCCGCCCGCGTGGCTGGCGAAAGGAGCCCGAA > 1:9049661/1‑101 (MQ=255)
TAAACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTATTGCCGGATTGCCGCAACGCCGCCCGCGTGGCTGGCGAAAGGAGCCCGAATTATGGAA < 1:1175766/101‑1 (MQ=255)
TGCCGGATTGCCGCAACGCCGCCCGCGTGGCTGGCGAAAGGAGCCCGAATTATGGAACTCGCGATCTGCACCGCCCCGGAAGCTGGCCTTGACAGTTTAAAC.................................................................................................... < NC_014034/2755518‑2755417
....................................................................................................ACGTGGTCGTATACACTGTGACGCACCTGGCAATGTGGTATTGCCGGATTGCCGCAACGCCGCCCGCGTGGCTGGCGAAAGGAGCCCGAATTATGGAACTCG < NC_014034/2755557‑2755458
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|