New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 408498 =34 (0.100)201 (0.610) 38/144 15.2 0.53 intergenic (+116/+32) glnA1/dapA glutamine synthetase/dihydrodipicolinate synthase
?NC_014034 = 1320695 328 (0.720)intergenic (+153/+32) potI1/RCAP_rcc01247 polyamine ABC transporter permease PotI/membrane transport family protein
Rejected: Position hash score below cutoff.

Only 100 of 337 total aligned reads displayed.

TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC...................................................................  <  NC_014034/408597‑408498
................................................................................................................................CTCCCCCCGGGATATTTGTGGCAAGATGAAGGGCAGCGC  <  NC_014034/1320695‑1320657
                                                                                                    ||||||||||||||||||||||||||||                                       
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCT                                                                    <  2:5369157/101‑1 (MQ=1)
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCT                                                                    >  1:4081724/1‑101 (MQ=1)
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCT                                                                    >  2:841552/1‑101 (MQ=1)
 GACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTC                                                                   <  2:2587740/101‑1 (MQ=1)
 GACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTC                                                                   >  2:8832576/1‑101 (MQ=1)
 GACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTC                                                                   >  2:3751761/1‑101 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                  >  1:1657951/1‑101 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                  <  1:9005340/101‑1 (MQ=1)
   CCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTG                                                                 <  1:1016137/101‑1 (MQ=1)
    CGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGC                                                                <  1:1230676/101‑1 (MQ=1)
     GAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCC                                                               >  1:3007494/1‑101 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                              >  1:8340630/1‑101 (MQ=1)
        CTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGGGCTGCCCCC                                                            >  1:5467382/1‑101 (MQ=17)
        CTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCC                                                            <  2:7102200/101‑1 (MQ=1)
         TGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCC                                                           >  2:6796195/1‑101 (MQ=1)
           ACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTATGCGGGGGGCTCTGCCCCCCGT                                                         >  1:1407643/1‑101 (MQ=1)
             CGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCT                                                       <  2:6524326/101‑1 (MQ=1)
             CGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCT                                                       >  2:4293903/1‑101 (MQ=1)
             CGACGGGACCAAGGCCGCGCATGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCTTCT                                                       <  1:7226280/101‑1 (MQ=0)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGGGCTGCCCCCCccctt                                                      >  1:5946596/1‑96 (MQ=12)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                      >  2:8131084/1‑101 (MQ=1)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                      >  2:7186263/1‑101 (MQ=1)
              GACGGGAACAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                      >  2:342892/1‑101 (MQ=1)
               gCGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTG                                                     <  2:674208/100‑1 (MQ=1)
               ACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTCCCCCCCGTCTTG                                                     <  1:6503360/101‑1 (MQ=1)
                  GGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTT                                                  <  1:8473264/101‑1 (MQ=1)
                   GACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGAGGCTCTGCCCCCCGTCTTGCTTT                                                 >  2:5934768/1‑101 (MQ=1)
                    ctCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                                <  1:1985870/99‑1 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                                <  2:1246707/101‑1 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                                >  2:5529449/1‑101 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGCGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                                >  2:1638406/1‑101 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                             >  1:1903417/1‑101 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                             >  1:109903/1‑101 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                             >  2:5027668/1‑101 (MQ=1)
                         GGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAA                                           <  2:8544196/101‑1 (MQ=1)
                         GGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAA                                           <  1:577696/101‑1 (MQ=1)
                         GGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCAGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAA                                           >  1:4378352/1‑101 (MQ=1)
                          GCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAG                                          <  2:443624/101‑1 (MQ=1)
                          GCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAG                                          <  1:5209011/101‑1 (MQ=1)
                           CCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGC                                         <  1:3960353/101‑1 (MQ=1)
                            CGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCC                                        <  2:2697995/101‑1 (MQ=1)
                            CGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCC                                        >  1:2756648/1‑101 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                      >  1:5364533/1‑101 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGAAAGCCTC                                      <  1:6009685/101‑1 (MQ=1)
                                CTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCC                                    <  1:6926026/101‑1 (MQ=1)
                                 TTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCC                                   <  1:5009307/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                 >  1:8591408/1‑101 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                 <  1:3224625/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                 <  2:4145159/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                 <  1:7073422/101‑1 (MQ=1)
                                    ACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCG                                <  2:2683625/101‑1 (MQ=1)
                                      GCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGG                              <  2:944544/101‑1 (MQ=1)
                                      GCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGG                              <  1:960545/101‑1 (MQ=1)
                                       CCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGA                             >  1:7269694/1‑101 (MQ=1)
                                        CGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGAT                            <  2:1832102/101‑1 (MQ=1)
                                        CGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGAT                            <  1:3134298/101‑1 (MQ=1)
                                        CGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGAT                            <  1:8055119/101‑1 (MQ=1)
                                        CGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGAT                            <  2:2911353/101‑1 (MQ=1)
                                         GCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATA                           <  1:7010151/101‑1 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                          <  2:7461871/101‑1 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                          >  1:3568798/1‑101 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                          >  2:485542/1‑101 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         <  1:1032220/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         >  1:2312134/1‑101 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         >  1:4635080/1‑101 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         <  1:6097395/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         <  2:4690766/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         >  1:7573220/1‑101 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         <  2:3039564/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         <  1:820290/101‑1 (MQ=1)
                                            ATGCAACGCGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                        <  2:6236583/101‑1 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                        <  2:4927386/101‑1 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                        >  2:5561056/1‑101 (MQ=1)
                                              GCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGCGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGc                      <  1:2693835/101‑2 (MQ=11)
                                               CAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGcg                     >  2:6288574/1‑99 (MQ=31)
                                                AACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGG                    >  2:3289602/1‑101 (MQ=32)
                                                AACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCATCCCCCCGGGAGATTTGCGG                    >  1:4291086/1‑101 (MQ=12)
                                                 ACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGC                   >  1:5304008/1‑101 (MQ=32)
                                                 ACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGAGGC                   >  2:5283891/1‑101 (MQ=32)
                                                  CACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                  <  2:2111254/101‑1 (MQ=32)
                                                    CGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAG                <  1:4013261/101‑1 (MQ=32)
                                                     GCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGA               >  1:9081973/1‑101 (MQ=32)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA            <  2:7790638/101‑1 (MQ=11)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA            >  1:2220312/1‑101 (MQ=11)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG          >  2:2254939/1‑101 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG          >  2:9042693/1‑101 (MQ=1)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGG         <  2:7550847/101‑1 (MQ=11)
                                                            TGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGa        <  2:2400879/101‑2 (MQ=11)
                                                            TGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGa        >  2:3526698/1‑100 (MQ=1)
                                                             GATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGac       <  1:6310210/101‑3 (MQ=1)
                                                             GATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGac       <  2:4596729/101‑3 (MQ=1)
                                                             GATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGac       >  1:6694281/1‑99 (MQ=1)
                                                             GATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGac       <  1:913219/101‑3 (MQ=1)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGACAt     >  2:8011014/1‑100 (MQ=14)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGACAtc    <  1:7950637/101‑3 (MQ=17)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGACAtc    >  1:1359949/1‑99 (MQ=17)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGACATCG   >  2:1972760/1‑101 (MQ=18)
                                                                  GAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGACATCGg  <  1:3756811/101‑2 (MQ=21)
                                                                  GAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGACATCGg  >  2:7575660/1‑100 (MQ=21)
                                                                  GAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGACATCGg  >  2:1437125/1‑100 (MQ=21)
                                                                                                    ||||||||||||||||||||||||||||                                       
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC...................................................................  <  NC_014034/408597‑408498
................................................................................................................................CTCCCCCCGGGATATTTGTGGCAAGATGAAGGGCAGCGC  <  NC_014034/1320695‑1320657

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG