New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	744656 =	283 (0.630)	69 (0.150)	3/196	40.9	0.23	intergenic (+41/+171)	idi2/bchO	isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
	?	NC_014034	900805 =	170 (0.370)					intergenic (‑134/‑153)	ldh/ftsW	L‑lactate dehydrogenase/cell division protein FtsW
Rejected: Position hash score below cutoff.

GCCAAGGAAAAGCAGGGGTGGGACAGGCTGTACCGCCGCAGACGGAAAGTCATTCATTTCATCTTGCCCCAAATATCCCGGGGGTCCGGGGGCGGAGCCCCC....................................................................................................  <  NC_014034/744757‑744656 ....................................................................................................CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCCAA  >  NC_014034/900805‑900904                                                                                                                                                                                                                            GGTGGGACAGGCTGTACCGCCGCAGACGGAAAGTCATTCATTTCATCTTGCCCCAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGGGGCCCCGG                                                                                       >  2:4195033/1‑101 (MQ=9)                                                                          ccgCCCGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGG                             <  2:854549/98‑1 (MQ=21)                                                                          acgCCCGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGG                             >  2:9062128/4‑101 (MQ=18)                                                                            gCCCGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGG                           >  1:2681074/2‑101 (MQ=25)                                                                              CCGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCA                         <  2:1449867/101‑1 (MQ=37)                                                                              CCGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCA                         >  1:5296350/1‑101 (MQ=37)                                                                              CCGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCA                         >  2:7036975/1‑101 (MQ=37)                                                                               CGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAA                        <  1:8898209/101‑1 (MQ=35)                                                                               CGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAA                        >  1:6354725/1‑101 (MQ=35)                                                                               CGGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAA                        >  1:5150192/1‑101 (MQ=35)                                                                                GGGTGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAAC                       <  2:2358615/101‑1 (MQ=21)                                                                                GGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAAC                       >  2:6968161/1‑101 (MQ=34)                                                                                GGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAAC                       <  2:7282371/101‑1 (MQ=34)                                                                                GGGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAAC                       >  2:1271103/1‑101 (MQ=34)                                                                                 GGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACT                      <  1:9199530/101‑1 (MQ=34)                                                                                 GGGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACT                      <  1:7249450/101‑1 (MQ=34)                                                                                 GGGGTGCGGGGGCGGA.CCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACT                      <  2:8438504/101‑1 (MQ=21)                                                                                 GGGGTGCGGGGGCGGA.CCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACT                      <  1:8518260/101‑1 (MQ=21)                                                                                  gggggCGGGGGCGGA.CCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTT                     <  1:8660899/96‑1 (MQ=12)                                                                                  GGGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTT                     >  1:8776875/1‑101 (MQ=34)                                                                                   GGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTG                    >  2:1917355/1‑101 (MQ=34)                                                                                   GGTGCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTG                    >  2:657671/1‑101 (MQ=34)                                                                                    gtgCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGG                   >  1:7262662/4‑101 (MQ=33)                                                                                     tgCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGG                  >  2:4741504/3‑101 (MQ=32)                                                                                     ggCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGG                  <  2:6861146/99‑1 (MQ=14)                                                                                      gCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGC                 >  1:2574215/2‑101 (MQ=31)                                                                                      gCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGC                 >  2:7562816/2‑101 (MQ=31)                                                                                      gCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGC                 >  2:7701646/2‑101 (MQ=31)                                                                                      gCGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGC                 >  2:6730690/2‑101 (MQ=31)                                                                                       CGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCT                <  2:1628643/101‑1 (MQ=11)                                                                                       CGGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCT                >  1:3322424/1‑101 (MQ=11)                                                                                        GGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  1:8778497/1‑101 (MQ=1)                                                                                        GGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  1:4519096/1‑101 (MQ=1)                                                                                        GGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               <  1:3855884/101‑1 (MQ=1)                                                                                        GGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  2:7085448/1‑101 (MQ=1)                                                                                        GGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  2:4503272/1‑101 (MQ=1)                                                                                        GGGGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               >  2:4473312/1‑101 (MQ=1)                                                                                        GGGGGCGGA.CCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTA               <  1:7926344/101‑1 (MQ=1)                                                                                         GGGGCGGAG.CCCCCGCGGGTCGCCCCGGTCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAG              <  1:2289067/101‑1 (MQ=1)                                                                                          GGGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGA             <  1:8643106/101‑1 (MQ=1)                                                                                           GGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            >  1:5342703/1‑101 (MQ=1)                                                                                           GGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            <  1:6367715/101‑1 (MQ=1)                                                                                           GGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            <  2:3937459/101‑1 (MQ=1)                                                                                           GGCGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            >  1:2066644/1‑101 (MQ=1)                                                                                           GGCGGA.CCCCCGGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAG            <  2:8023142/101‑1 (MQ=0)                                                                                             CGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTg          >  2:3535193/1‑100 (MQ=1)                                                                                             CGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          >  1:2418714/1‑101 (MQ=1)                                                                                             CGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          <  2:8147701/101‑1 (MQ=1)                                                                                             CGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          <  1:4862882/101‑1 (MQ=1)                                                                                             CGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          >  2:5879499/1‑101 (MQ=1)                                                                                             CGGAG.CCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          >  2:6334487/1‑101 (MQ=1)                                                                                              gggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          <  2:4187362/96‑1 (MQ=1)                                                                                              cggggCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          <  1:7856191/96‑1 (MQ=1)                                                                                              cgccCCCCCGGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTC          <  2:5455014/97‑1 (MQ=2)                                                                                               ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGgggcg         >  2:7365583/5‑96 (MQ=1)                                                                                               ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         <  1:5703813/97‑1 (MQ=1)                                                                                               ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         >  2:2081169/5‑101 (MQ=1)                                                                                               ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         >  2:1739978/5‑101 (MQ=1)                                                                                               ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         >  2:1606131/5‑101 (MQ=1)                                                                                               ggagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         >  2:8835104/5‑101 (MQ=1)                                                                                               cgcCCCCCGGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCG         <  2:4871896/98‑1 (MQ=14)                                                                                                gcCCCCGCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGG        <  2:4596769/99‑1 (MQ=14)                                                                                                gagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGG        <  1:7502822/98‑1 (MQ=1)                                                                                                gagCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGG        <  1:868656/98‑1 (MQ=1)                                                                                                  CCCCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCG      <  2:7138228/101‑1 (MQ=1)                                                                                                    CCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCC    >  1:2862377/1‑101 (MQ=1)                                                                                                    CCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCC    <  1:8365763/101‑1 (MQ=1)                                                                                                    CCCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCC    >  1:1421921/1‑101 (MQ=1)                                                                                                    CCCCGCGCGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCC    <  2:4871506/101‑1 (MQ=1)                                                                                                                                                                                                            GCCAAGGAAAAGCAGGGGTGGGACAGGCTGTACCGCCGCAGACGGAAAGTCATTCATTTCATCTTGCCCCAAATATCCCGGGGGTCCGGGGGCGGAGCCCCC....................................................................................................  <  NC_014034/744757‑744656 ....................................................................................................CCCGCGGGTCGCCCCGGCCCTGCCGGGGCGAAAGCCCCCGCGCGCCGCGGCCCGGCAAAAGCTCTGGTCAGAGGGGGCAACTTGGGCTAGAGTCGGCGCCAA  >  NC_014034/900805‑900904 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG