New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 744807	102 (0.270)	30 (0.080)	15/164	28.2	0.25	intergenic (+192/+20)	idi2/bchO	isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
	?	NC_014034	1699965 =	79 (0.170)					intergenic (+38/+5)	RCAP_rcc01568/purF	RES domain family protein/amidophosphoribosyltransferase
Rejected: Position hash score below cutoff.

CCCCGCGGGTCGCCTCGG.....................................................................................................................  >  NC_014034/744790‑744807 .....................................CCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGTCGCAATATTGCGGACAGGC  >  NC_014034/1699965‑1700062                   ||||||||||||||||||                                                                                                    cccgcCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGC                                    >  2:4632147/6‑101 (MQ=19)  cggcCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCC                                   <  1:7944496/97‑1 (MQ=9)  ccgcCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCC                                   >  2:918207/5‑101 (MQ=16)     cCGGGTGGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGA                                >  1:7108755/2‑101 (MQ=2)     cCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGg                                >  1:6830421/2‑100 (MQ=2)     cCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGA                                >  1:4736742/2‑101 (MQ=2)     cCGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGA                                >  1:8491094/2‑101 (MQ=2)      CGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAG                               >  1:3602119/1‑101 (MQ=0)      CGGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAG                               >  1:7817913/1‑101 (MQ=0)       GGGTCGCCTCGGCGTCAGCCGAGGCGAAATCCCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGA                              <  1:4606332/101‑1 (MQ=0)       GGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGA                              >  1:3954067/1‑101 (MQ=0)       GGGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGA                              <  1:8040650/101‑1 (MQ=0)        gtTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAA                             <  2:919780/99‑1 (MQ=0)        GGTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAA                             >  1:42341/1‑101 (MQ=0)         GTCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAA                            <  2:1848004/101‑1 (MQ=0)          TCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAAC                           <  2:5895736/101‑1 (MQ=0)          TCGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAAC                           <  2:5020368/101‑1 (MQ=0)           CGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACA                          >  2:1707357/1‑101 (MQ=0)           CGCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACA                          >  2:3043356/1‑101 (MQ=0)            GCCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAG                         >  2:2079774/1‑101 (MQ=0)             CCTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGG                        >  2:4335979/1‑101 (MQ=0)              CTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGC                       >  1:8809196/1‑101 (MQ=0)              CTCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGC                       <  1:7113376/101‑1 (MQ=0)               TCGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCG                      >  2:6322363/1‑101 (MQ=0)                CGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGc                     >  1:5387878/1‑100 (MQ=0)                CGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGT                     >  1:9012168/1‑101 (MQ=0)                CGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGT                     >  1:62784/1‑101 (MQ=0)                CGGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGT                     >  2:8036081/1‑101 (MQ=0)                 GGCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGTC                    >  1:4967174/1‑101 (MQ=0)                  GCGTCAGCCGAGGCGAAATACCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGTCG                   >  2:8136432/1‑101 (MQ=0)                                  atT.CCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGTCGCAATATTGCGGACAGGC  <  2:8974330/99‑1 (MQ=1)                   ||||||||||||||||||                                                                                                    CCCCGCGGGTCGCCTCGG.....................................................................................................................  >  NC_014034/744790‑744807 .....................................CCCCCTCAGCCCTTCATCTTGAAGCCCTTGCCGATCTGATCGGAGGGCTTCACCGGATAATCGCCCGAGAAACAGGCGTCGCAATATTGCGGACAGGC  >  NC_014034/1699965‑1700062 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG