New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 744809	99 (0.270)	37 (0.100)	19/162	25.7	0.39	intergenic (+194/+18)	idi2/bchO	isopentenyl‑diphosphate delta‑isomerase/magnesium‑chelatase BchO
	?	NC_014034	= 1193612	16 (0.030)					intergenic (+77/‑174)	metK/trmB	methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase
Rejected: Position hash score below cutoff.

GAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGC....................................................................................................  >  NC_014034/744698‑744809 ................................................................................................GCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCAGACCGCTTTCTTCAGCGCCT  <  NC_014034/1193612‑1193513                                                                                                                                                                                                                                                                       TTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGGGGCGAAATATCCTGCAACGCATGAAAAAGG                                                                >  1:2833702/1‑101 (MQ=255)                                                    TTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCTCGGGCTTGCCCGAGGCGGAAAATCCTGCAACGCATGAAAAAGGGG                                                              >  1:2393702/1‑101 (MQ=255)                                                         TGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATAACCTGCAACGCCTGAAAAAGGGGGACGA                                                         >  1:549136/1‑101 (MQ=255)                                                             AAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGGCGCCTCGGGCTTGCCCGCGGCGAAATATCCTGCAACGCATGAAAAAGGGGGGCGAAGCC                                                     >  1:7904473/1‑101 (MQ=255)                                                                        GGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGg                                          >  2:6471612/1‑100 (MQ=17)                                                                        GGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGg                                          >  2:6444075/1‑100 (MQ=17)                                                                        GGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCCTCCCCGT                                          >  1:1825110/1‑101 (MQ=17)                                                                         GGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGcg                                         >  2:868819/1‑99 (MQ=17)                                                                           GGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGAT                                       >  1:158411/1‑101 (MQ=32)                                                                           GGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGCGAT                                       >  2:8163754/1‑101 (MQ=17)                                                                              GCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGGCGAAGCCCCCTTCCCCGTGATCTT                                    >  1:2008456/1‑101 (MQ=17)                                                                              GCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGGCCCCTTCCCCCTGATCTT                                    >  1:826944/1‑101 (MQ=12)                                                                               CGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGGGGCGAAATATCCTGGAACGCATGAAAAAGGGGGCCGAAGCCCCCCTCCCCGTGATCTTT                                   >  1:239399/1‑101 (MQ=255)                                                                               CGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACTCATGAAAAAGGGGGCCGAAGCCCCCCTCCCCGTGCTCTTT                                   >  1:1813190/1‑101 (MQ=255)                                                                               CGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTT                                   >  1:8473186/1‑101 (MQ=32)                                                                               CGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCCTGATCTTT                                   >  1:5548842/1‑101 (MQ=17)                                                                                 GGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTG                                 >  1:7450123/1‑101 (MQ=32)                                                                                 GGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTG                                 >  1:3028652/1‑101 (MQ=32)                                                                                   GGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGGGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAA                               >  1:5102858/1‑101 (MQ=17)                                                                                   GGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAA                               >  1:4877857/1‑101 (MQ=32)                                                                                   GGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAA                               >  2:1418558/1‑101 (MQ=32)                                                                                   GGGCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAA                               >  2:2783940/1‑101 (MQ=32)                                                                                     GCGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAAC                             >  1:7434844/1‑101 (MQ=32)                                                                                     GCGGACCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAAC                             <  1:4300170/101‑1 (MQ=17)                                                                                      cggtgtCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTGCCCCGTGATCTTTTGAAACC                            >  1:8836301/7‑101 (MQ=0)                                                                                      CGGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACC                            >  2:5836651/1‑101 (MQ=32)                                                                                       GGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCG                           >  1:5054237/1‑101 (MQ=31)                                                                                       GGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCG                           >  1:4749382/1‑101 (MQ=31)                                                                                       GGAGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCG                           >  2:3935460/1‑101 (MQ=31)                                                                                         AGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGGCCCCTTCTCCGTGATCTTTTGGAACCGGC                         >  2:5932513/1‑101 (MQ=0)                                                                                         AGCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGC                         >  2:4897209/1‑101 (MQ=1)                                                                                          GCCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGCGATCTTTTGAAACCGGCT                        >  2:5203268/1‑101 (MQ=1)                                                                                           CCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGGCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTC                       >  2:8816646/1‑101 (MQ=1)                                                                                           CCCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTC                       >  1:1402744/1‑101 (MQ=1)                                                                                            CCCCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAAAATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCc                      >  2:6054162/1‑100 (MQ=1)                                                                                              CCCGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCAGA                    >  2:7911564/1‑101 (MQ=1)                                                                                                CGCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCAGACC                  >  1:7084062/1‑101 (MQ=1)                                                                                                                                                                                                                      GAAATGAATGACTTTCCGTCTGCGGCGGTACAGCCTGTCCCACCCCTGCTTTTCCTTGGCAAAATACGCCGGGGGGTGCGGGGGGCGGAGCCCCCCGCGGGTCGCCTCGGGC....................................................................................................  >  NC_014034/744698‑744809 ................................................................................................GCGGGTCGCCTCGGGCTTGCCCGAGGCGAAATATCCTGCAACGCATGAAAAAGGGGGCCGAAGCCCCCTTCCCCGTGATCTTTTGAAACCGGCTCAGACCGCTTTCTTCAGCGCCT  <  NC_014034/1193612‑1193513 Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 37 ≤  ATCG