BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	974316 =	24 (0.060)	127 (0.300)	13/182	31.3	0.75	intergenic (+196/+63)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
*	?	NC_014034	= 1253890	62 (0.140)	127 (0.300)	13/182	31.3	0.75	intergenic (+48/+43)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
Rejected: Position hash score below cutoff.

Only 100 of 158 total aligned reads displayed.


GATCGCGCGCTCGAACCTGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCGGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCGGGGGCT...........................................................................................................  <  NC_014034/974412‑974316


........................................................................................................CGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCAGCACC  <  NC_014034/1253890‑1253791


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GATCGCGCGCTCGAACCTGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCCGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCGGGGGCCCCGC                                                                                                         >  1:1441598/1‑101 (MQ=0)


  TCGCGCGCTCGAACCTGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCCGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCGGGGGGTCCcgcc                                                                                                       >  2:8487879/1‑97 (MQ=0)


   CGCGCGCTCGAACCTGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCCGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCGGGGGGTCCGCCCC                                                                                                      >  1:1139876/1‑101 (MQ=0)


   CGCGCGCTCGAACCTGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCCGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCGGGGGCTCCGGCCC                                                                                                      >  2:8050750/1‑101 (MQ=0)


      GCGCTCGAACCTGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCCGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCGGGGGGTCCGCCCCCcg                                                                                                   >  1:9160992/1‑99 (MQ=0)


         CTCGAACCTGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCCGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCCGGGGCTCCGCCCCCGggcc                                                                                                >  2:3592398/1‑97 (MQ=0)


                 TGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCCGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCGGGGGCTCCGCCCCCGGACCCCCGggat                                                                                        >  1:7153873/1‑97 (MQ=1)


                                                    agaggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTT                                                     <  1:4075217/96‑1 (MQ=32)


                                                    agaggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTT                                                     <  2:5901726/96‑1 (MQ=32)


                                                     gaggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTT                                                    <  1:3036998/97‑1 (MQ=32)


                                                     gaggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTT                                                    <  1:5025910/97‑1 (MQ=32)


                                                      aggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTA                                                   <  2:8769894/98‑1 (MQ=32)


                                                      aggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTA                                                   <  1:1418121/98‑1 (MQ=32)


                                                      aggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTA                                                   <  1:2384669/98‑1 (MQ=32)


                                                      aggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTA                                                   <  2:1395948/98‑1 (MQ=32)


                                                       ggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTAT                                                  <  1:1235660/99‑1 (MQ=32)


                                                       ggATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTAT                                                  <  1:475660/99‑1 (MQ=32)


                                                        gATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATT                                                 <  1:979518/100‑1 (MQ=32)


                                                        gATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATT                                                 <  1:5175856/100‑1 (MQ=32)


                                                         ATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCTGGGCGGGATCGGTTTATTT                                                <  2:6535837/101‑1 (MQ=17)


                                                         ATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTT                                                <  2:4533569/101‑1 (MQ=32)


                                                         ATTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTT                                                <  1:2727867/101‑1 (MQ=32)


                                                          TTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTC                                               <  1:6772444/101‑1 (MQ=32)


                                                          TTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTC                                               <  2:6503729/101‑1 (MQ=32)


                                                          TTTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTC                                               <  2:971927/101‑1 (MQ=32)


                                                           TTCGCCTCGGCTTTCGCCGAGGCGGCCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCG                                              <  1:8257000/101‑1 (MQ=17)


                                                           TTCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCG                                              <  2:1173669/101‑1 (MQ=32)


                                                            TCGCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGC                                             <  2:575108/101‑1 (MQ=32)


                                                             CGCCTCGGCTTGCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCC                                            <  1:5023332/101‑1 (MQ=17)


                                                              GCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCT                                           <  1:5187214/101‑1 (MQ=32)


                                                              GCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCT                                           <  1:7844076/101‑1 (MQ=32)


                                                              GCCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCT                                           <  2:6187425/101‑1 (MQ=32)


                                                               CCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTC                                          <  1:353063/101‑1 (MQ=32)


                                                               CCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTC                                          <  2:1537030/101‑1 (MQ=32)


                                                               CCTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTC                                          <  2:1213886/101‑1 (MQ=32)


                                                                CTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCG                                         <  2:8837266/101‑1 (MQ=32)


                                                                CTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCG                                         <  1:8030549/101‑1 (MQ=32)


                                                                CTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCG                                         <  1:3856894/101‑1 (MQ=32)


                                                                CTCGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCG                                         <  1:3616442/101‑1 (MQ=32)


                                                                CTCGGCTTGCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCG                                         <  1:8353035/101‑1 (MQ=17)


                                                                  CGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAA                                       <  1:8852618/101‑1 (MQ=32)


                                                                  CGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAA                                       <  2:6921966/101‑1 (MQ=32)


                                                                  CGGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAA                                       <  2:8865631/101‑1 (MQ=32)


                                                                   GGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAG                                      <  2:6443296/101‑1 (MQ=32)


                                                                   GGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAG                                      <  1:5711622/101‑1 (MQ=32)


                                                                   GGCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAG                                      <  2:7101612/101‑1 (MQ=32)


                                                                    gcttgCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGG                                     <  1:1163531/96‑1 (MQ=17)


                                                                    GCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGG                                     <  1:4810530/101‑1 (MQ=32)


                                                                    GCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGG                                     <  1:4651582/101‑1 (MQ=32)


                                                                    GCTTTCGCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGG                                     <  1:755977/101‑1 (MQ=32)


                                                                          GCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGC                               <  1:1132787/101‑1 (MQ=32)


                                                                          GCCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGC                               <  2:5213820/101‑1 (MQ=32)


                                                                           CCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCC                              <  1:8605054/101‑1 (MQ=32)


                                                                           CCGAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCC                              <  2:8409318/101‑1 (MQ=32)


                                                                             GAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGG                            <  2:6361437/101‑1 (MQ=32)


                                                                             GAGGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGG                            <  2:5956447/101‑1 (MQ=32)


                                                                               GGCGACCCGGCGGGGGCTCCGCCCCCGCACCCTCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTC                          <  1:4382864/101‑1 (MQ=17)


                                                                               GGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTC                          <  1:6489713/101‑1 (MQ=32)


                                                                               GGCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTC                          <  2:3738698/101‑1 (MQ=32)


                                                                                GCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCT                         <  2:2360179/101‑1 (MQ=32)


                                                                                GCGACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCT                         <  1:7042996/101‑1 (MQ=32)


                                                                                  GACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGG                       <  1:7662563/101‑1 (MQ=32)


                                                                                   ACCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTACTTCGCCTCGAAGGCGCAGCCGGTCTGGA                      <  2:7585905/101‑1 (MQ=17)


                                                                                    CCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAA                     <  2:1331803/101‑1 (MQ=32)


                                                                                    CCCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGGTTATTTCGCCTCGAAGGCGCAGCCGGGCTGGAA                     >  2:8094353/1‑101 (MQ=12)


                                                                                     CCGGCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAG                    <  2:3427964/101‑1 (MQ=32)


                                                                                        gCGGGGGCTCCGCCCCCGCCCCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCG                 <  2:6809075/100‑1 (MQ=11)


                                                                                        gCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCG                 <  2:6725337/100‑1 (MQ=11)


                                                                                        gCGGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCG                 <  1:4752015/100‑1 (MQ=11)


                                                                                          GGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAG               >  1:7795931/1‑101 (MQ=1)


                                                                                          GGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAG               <  2:179280/101‑1 (MQ=1)


                                                                                          GGGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAG               >  1:4450793/1‑101 (MQ=1)


                                                                                           GGGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGC              >  1:8769849/1‑101 (MQ=1)


                                                                                            GGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCT             >  1:5692483/1‑101 (MQ=1)


                                                                                            GGGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCT             >  1:2681763/1‑101 (MQ=1)


                                                                                             GGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTT            >  2:4968898/1‑101 (MQ=1)


                                                                                             GGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTT            >  2:3754412/1‑101 (MQ=1)


                                                                                             GGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTT            <  2:288260/101‑1 (MQ=1)


                                                                                             GGCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTT            >  1:7826247/1‑101 (MQ=1)


                                                                                              GCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCCGCCGGTCTGGAAGCCGAGCTTG           >  1:875040/1‑101 (MQ=1)


                                                                                              GCTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTG           <  1:3855006/101‑1 (MQ=1)


                                                                                               CTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGC          <  2:3033536/101‑1 (MQ=1)


                                                                                               CTCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGC          >  2:6864967/1‑101 (MQ=1)


                                                                                                TCCGCCCCCGCCCCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCC         <  1:7338919/101‑1 (MQ=1)


                                                                                                TCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGCGCTTttc         <  2:5476609/101‑4 (MQ=0)


                                                                                                TCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCC         >  2:8793931/1‑101 (MQ=1)


                                                                                                TCCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCC         >  2:6302869/1‑101 (MQ=1)


                                                                                                 CCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCC        <  2:5855873/101‑1 (MQ=1)


                                                                                                 CCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCC        <  2:6707128/101‑1 (MQ=1)


                                                                                                 CCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCC        <  1:1781962/101‑1 (MQ=1)


                                                                                                 CCGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCC        >  1:6735646/1‑101 (MQ=1)


                                                                                                  CGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCA       <  2:4733060/101‑1 (MQ=1)


                                                                                                  CGCCCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCA       <  1:4186448/101‑1 (MQ=1)


                                                                                                  CGCCCCCGCACCCCCGAGGTATGTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGaaaatccc       <  2:5830227/101‑9 (MQ=0)


                                                                                                     CCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCAGCA    <  1:2447492/101‑1 (MQ=1)


                                                                                                     CCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCAGCA    >  2:8711436/1‑101 (MQ=1)


                                                                                                     CCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCAGCA    >  2:6057410/1‑101 (MQ=1)


                                                                                                     CCCCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCAGCA    <  1:3188291/101‑1 (MQ=1)


                                                                                                       CCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGCACTTGCCCAGCACC  >  2:3666647/1‑101 (MQ=0)


                                                                                                       CCGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCAGCACC  >  1:34238/1‑101 (MQ=1)


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GATCGCGCGCTCGAACCTGATCCTGTTCGGCTGAGAACCGGCCGTTGCGGCGGGGGTATTTCGCCTCGGCTGTCGCCGAGGCGACCCGCCGGGGGCT...........................................................................................................  <  NC_014034/974412‑974316


........................................................................................................CGCACCCCCGAGGTATTTAGGGCAAGATGAGAGCGGGGCGGGATCGGTTTATTTCGCCTCGAAGGCGCAGCCGGTCTGGAAGCCGAGCTTGCCCAGCACC  <  NC_014034/1253890‑1253791

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 28 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG