New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 985692 =394 (1.040)83 (0.220) 26/166 22.7 0.25 intergenic (+31/‑53) betB/betA betaine‑aldehyde dehydrogenase/choline dehydrogenase
?NC_014034 = 2330175 102 (0.220)intergenic (+150/+162) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 481 total aligned reads displayed.

CGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGCCGGTCCCCCCCCGGACCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGGCTCGGCC  >  NC_014034/985592‑985792
                                                                                                    |                                                                                                    
cgcgATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGAccc                                                                                                      <  1:3526776/101‑1 (MQ=255)
 gcgATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCCGAcccc                                                                                                     >  2:4214702/1‑101 (MQ=255)
  cgATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCCGCccccc                                                                                                    >  1:4640181/1‑101 (MQ=255)
   gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACNCAGGCCGGGGGGGCCCCCCCCCGCcccccc                                                                                                   >  1:1976352/1‑101 (MQ=255)
   gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGAcccccc                                                                                                   >  1:5752435/1‑101 (MQ=255)
    aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCCGGccccccg                                                                                                  >  2:7603229/1‑100 (MQ=255)
       gAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGGCCCCCCCCGAccccccggcg                                                                                               >  1:7043089/1‑97 (MQ=255)
          cACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTAt                                                                                           <  1:9090631/101‑1 (MQ=255)
           aCTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGGA.CCCCCCGGCGTAtt                                                                                          >  1:1601133/1‑101 (MQ=255)
           aCTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGG.GCCCCCCGGCGGAtt                                                                                          >  2:7788542/1‑101 (MQ=255)
            cTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTAttt                                                                                         <  1:2392448/101‑1 (MQ=255)
             tataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTg                                                                                        <  1:1427217/101‑1 (MQ=255)
             tataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTg                                                                                        <  1:3851007/101‑1 (MQ=255)
              cgaCGCAGGTGAAGGCCGTCTAGGTCCGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTgc                                                                                       <  1:6377570/99‑1 (MQ=255)
              ataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTgc                                                                                       <  1:2314933/101‑1 (MQ=255)
                aCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCCG.GCCCCCCGGCGGATTTgcgc                                                                                     >  2:6796185/1‑101 (MQ=255)
                  gCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCa                                                                                   <  2:8299060/101‑1 (MQ=255)
                   cAGGGGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCaa                                                                                  <  1:6894013/101‑1 (MQ=38)
                    aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAg                                                                                 <  1:6062976/101‑1 (MQ=255)
                      gTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaa                                                                               <  2:3107584/101‑1 (MQ=255)
                       tGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCTCCCGGA.CCCCCCGGCGCATTTGCGCCAAGaaa                                                                              >  2:5015562/1‑101 (MQ=255)
                         aaGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaaaaa                                                                            <  1:5608912/101‑1 (MQ=255)
                         aaGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGaaaaa                                                                            <  2:3479845/101‑1 (MQ=255)
                         aaGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGGA.CCCCCCGGCGGCTTTGCGCCCAGaaaaa                                                                            >  1:8253001/1‑101 (MQ=255)
                          aGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCCGACCCCCCC.GCGGATTTTCGCCCAGaaaaaa                                                                           >  2:4316589/1‑101 (MQ=255)
                              cGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGGA.CCCCCCGGCGGATTTGCGCCAAGAAAAAACAgg                                                                       >  2:3386492/1‑101 (MQ=255)
                               gTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGACCCCCCC.GCGTATTTGCGCCAAGAAAAAACAggg                                                                      >  2:8805534/1‑101 (MQ=255)
                                tCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGt                                                                     >  1:9106170/1‑101 (MQ=38)
                                 cTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGtt                                                                    <  2:3213423/101‑1 (MQ=255)
                                  taggTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTc                                                                   <  1:7760872/98‑1 (MQ=37)
                                  tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTc                                                                   <  2:4084182/101‑1 (MQ=255)
                                  tATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCCGACCCCCCC.GCGGATTTGCGCCCAGAAAAAACAGGGGTc                                                                   >  2:16237/1‑101 (MQ=255)
                                   ttGTCGGCCTGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCa                                                                  <  2:788768/100‑1 (MQ=38)
                                   aTGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGGACCCCCCC.GCGTATTTGCGCCCAGAAAAAACAGGGGTCa                                                                  >  1:8132499/1‑101 (MQ=37)
                                    tGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAg                                                                 <  2:5643110/101‑1 (MQ=255)
                                      tCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCTCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGc                                                               <  1:5414520/101‑1 (MQ=38)
                                        ggCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCag                                                             <  1:2998390/101‑1 (MQ=255)
                                         gCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCaga                                                            <  1:4047274/101‑1 (MQ=255)
                                          cATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCagag                                                           <  1:5015722/101‑1 (MQ=255)
                                            tGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAggg                                                         <  1:7269121/101‑1 (MQ=255)
                                              ggaccGGCCTAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTc                                                       <  2:7328450/98‑1 (MQ=25)
                                               ggCGGGCCGGGAGCCCCAATTGAACCGCACGCCGGGGCGTCCCCCCCCGGA.CCCCCCGGCGTATTAGCGCCAAGAAAAAACAGGGTTCAGGCAGAGTGTcg                                                      <  2:1120515/101‑1 (MQ=255)
                                               ggCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGGTCAGGCAGAGGGTcg                                                      >  2:2220830/1‑101 (MQ=37)
                                                gCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgc                                                     <  2:8075803/101‑1 (MQ=255)
                                                gCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgc                                                     <  1:9024717/101‑1 (MQ=255)
                                                 ccGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgcg                                                    <  2:2868704/101‑1 (MQ=255)
                                                  cGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgcgc                                                   <  2:3330135/101‑1 (MQ=255)
                                                  cGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgcgc                                                   <  1:1089173/101‑1 (MQ=255)
                                                   ggTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgcgtg                                                  <  1:8666141/101‑3 (MQ=38)
                                                   ggTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGGcgcgcg                                                  >  1:6539416/1‑101 (MQ=37)
                                                    gTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCggagcggcacggct                                                 >  2:4729524/1‑91 (MQ=37)
                                                    gTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCga                                                 >  2:2776828/1‑101 (MQ=39)
                                                    gTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAAAGGGTTCAGGCAGAgggggngncgn                                                 >  1:3713875/1‑93 (MQ=37)
                                                    gTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAAGGTTCAAGAAGAGGGGCGCGCga                                                 >  1:6763112/1‑101 (MQ=25)
                                                     tCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAAAAGGGTTCAGGCAGAGGGGCGCGCgat                                                >  1:1358179/1‑101 (MQ=37)
                                                       gagaGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGTCAAGAAAAAACAGGGTTCAGGCAGAGGGGGGCGCgatgg                                              >  2:5718378/1‑101 (MQ=255)
                                                       gagaGCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCCG.GCCCCCCGGCGGATTTGCGCCCAGAAAAAACAGGGGTCAGGCAGAGGGGCGCGCggtgg                                              >  1:4748217/1‑101 (MQ=255)
                                                        agagCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatgga                                             >  2:5490235/1‑101 (MQ=38)
                                                        agagCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGGATTTGCGCCAAGAAAAAACAGGGGTCAGGCAGAGGGGCGCGCgatgga                                             >  1:8904420/1‑101 (MQ=37)
                                                         gagCCCCTATTGAAACGCAGGCCGGGGGGGCCCCCCCCGG.GCCCCCCGGCGGATTTGCGCCCAGAAAAAACAGGGTTCAGGCAGAGGGGCGCGCgatggat                                            >  1:786658/1‑101 (MQ=255)
                                                          agCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatggatg                                           >  2:464680/1‑101 (MQ=39)
                                                           gCCCCTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGc                                          <  1:2200181/101‑1 (MQ=255)
                                                           gCCCCTATTGAAACGCAGGCCGGGGGGCCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGc                                          <  1:3268613/101‑1 (MQ=38)
                                                            gcccTATTGAGACTCAGGCCGGGGGGGCCCCCCCCGG.GCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCg                                         <  1:8521128/100‑1 (MQ=37)
                                                             cccTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCgg                                        <  2:2464766/101‑1 (MQ=255)
                                                             cccTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCgg                                        <  1:4331331/101‑1 (MQ=255)
                                                              ccTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGGTGCGGa                                       <  1:3321734/101‑1 (MQ=38)
                                                              ccTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGa                                       <  2:8886891/101‑1 (MQ=255)
                                                               cTATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGGCCCCCCC.GCGGATTTGCGCCAAGAAAAAACAGGGGTCAGGCAGAGGGGCGCGCGATGGGTGCgggt                                      >  1:2477279/1‑99 (MQ=255)
                                                                tATTGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGGTCAGGCAGAGGGTCGCGCGATGGGTGCGGAtt                                     >  2:6517794/1‑101 (MQ=38)
                                                                ggctGAAACGCAGGCCGGGGGCTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGAtt                                     <  2:5856765/98‑1 (MQ=25)
                                                                  ttGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAt                                   <  1:5822575/101‑1 (MQ=255)
                                                                   tGAAACGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAtg                                  <  1:6227901/101‑1 (MQ=255)
                                                                      aaCGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGa                               <  1:7603556/101‑1 (MQ=255)
                                                                       aCGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGAt                              <  1:1188275/101‑1 (MQ=255)
                                                                        cGCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATc                             <  1:4468786/101‑1 (MQ=255)
                                                                        cGCAGGCCGGGGGGTCCCCCCCCGG.CCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATc                             <  2:1783760/101‑1 (MQ=255)
                                                                         gCAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCg                            <  1:1727108/101‑1 (MQ=255)
                                                                          cAGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGGCGCGCGATGGATGCGGATTATGTGATCGt                           >  2:443769/1‑101 (MQ=38)
                                                                           aGGCCGGGGGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGtt                          >  2:5214775/1‑101 (MQ=255)
                                                                            ggccggggGGTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTg                         <  2:3751286/101‑1 (MQ=255)
                                                                              gccggggggtcccccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTggg                       <  1:8336677/91‑1 (MQ=38)
                                                                               cggggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTgggg                      <  2:2574397/96‑1 (MQ=255)
                                                                                ggggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGc                     >  1:3425152/5‑101 (MQ=255)
                                                                                 gggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCa                    >  2:5363282/4‑101 (MQ=255)
                                                                                  ggggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAg                   <  1:1509161/99‑1 (MQ=255)
                                                                                    ggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCTGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGc                 >  1:2795912/1‑101 (MQ=255)
                                                                                    ggTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGTGGATTATGTGATCGTTGGGGCAGGc                 >  1:5268000/1‑101 (MQ=255)
                                                                                     gTCCCCCCCCGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCt                <  2:2076943/101‑1 (MQ=255)
                                                                                       ccccccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGGTTATGGGATCGTTGGGGCAGGCTCg              >  2:3945920/1‑101 (MQ=255)
                                                                                       ccccccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCg              <  1:7986626/101‑1 (MQ=255)
                                                                                         ccccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCggg            >  1:1890412/1‑101 (MQ=255)
                                                                                         ccccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCggg            <  2:6974788/101‑1 (MQ=255)
                                                                                           ccccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggcg          >  2:3707418/1‑101 (MQ=255)
                                                                                            cccGGA.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggcgg         >  2:711640/1‑101 (MQ=255)
                                                                                               cggaccccccGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGGCt       >  1:2658748/5‑101 (MQ=255)
                                                                                               cggaccccccGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGGCt       <  2:1327715/97‑1 (MQ=255)
                                                                                                ggaccccccGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGGGTc      >  2:8594770/4‑101 (MQ=255)
                                                                                                    cccccGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGGCTCGGcc  <  1:3167004/101‑1 (MQ=255)
                                                                                                    cccccGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGGCTCGGcc  <  2:8210029/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGCCGGTCCCCCCCCGGACCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGGCTCGGCC  >  NC_014034/985592‑985792

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG