BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 392469	211 (0.470)	58 (0.130)	6/198	38.1	0.22	intergenic (‑117/+26)	RCAP_rcc00363/trmD	hypothetical protein/tRNA (guanine‑N1)‑methyltransferase
*	?	NC_014034	2330309 =	212 (0.460)	58 (0.130)	6/198	38.1	0.22	intergenic (+284/+28)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 235 total aligned reads displayed.


TCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTC  >  NC_014034/392369‑392569


tCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCggg                                                                                                        >  2:8990984/1‑101 (MQ=255)


tCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCggg                                                                                                        >  1:5582565/1‑101 (MQ=255)


  aCCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCggggg                                                                                                      >  1:4899311/1‑99 (MQ=255)


  aCCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGCTG.CCCCC..GGCggggg                                                                                                      >  2:1599363/1‑99 (MQ=255)


     gcgcAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.ggc                                                                                                  >  2:5927629/1‑99 (MQ=255)


      cgcAAAACTATGCGGGCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCgggggggcg                                                                                                  >  1:8843729/1‑95 (MQ=25)


        cAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCgggggggctcc                                                                                                >  2:2553059/1‑93 (MQ=255)


          agccTATGCGGCCCAACCCGGAGGGACAATGGCAGGCCTTTT.CATCTTGCCTCAAATACCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGgc                                                                                             <  2:3921834/98‑1 (MQ=25)


          aGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCgggggggggcggg                                                                                              >  2:7753741/1‑91 (MQ=255)


          aGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GCCCCGgc                                                                                             >  1:5909132/1‑101 (MQ=255)


            aCTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCGCCgcgc                                                                                           >  2:1391648/1‑101 (MQ=25)


             cTATGCGGCCCAACCGGGAGGGACAAGGGCAGGCCATTT.CATCTTGCCTCAAATACCCCGGGGG.TCG.GGGGGCGGAC.CCCCC..GGCGGGTC.GCCTCGGCGCa                                                                                          <  2:5441143/101‑1 (MQ=21)


             cTAGGCGCCCCAACCCGGAGGGAAAAGGGCAGGCCATTT.CATCTTGCCTAAAATACCCGGGGGG.CCC.GGGGGCGGAC.CCCCC..GGCGGGTC.GCCTCGGCGCa                                                                                          <  1:2578095/101‑1 (MQ=18)


             cTAGGCCGCCAAAACGGGGGGAACAAGGGCAGGCCTTTT.CTTCTTCCCTAAAATCCCCGGGGGG.CCG.GGGGGGGGCC.CCCCC..GGCGGGTC.GCCTCGGCGCa                                                                                          <  1:6595262/101‑1 (MQ=12)


              tATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCCCGgcggcg                                                                                         >  2:2023495/1‑98 (MQ=25)


               aTGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGTGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCCCGGCGCGGc                                                                                        >  1:135997/1‑101 (MQ=25)


               aTGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GGCGCGGCGCCGc                                                                                        >  2:6855400/1‑101 (MQ=21)


                ggCGGCCCAAACCGGAGGGACAATGGCAGGCCTTTT.CATCTTGCCTCAAATACCCCGGGGG.TCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGcc                                                                                       <  2:4937964/100‑1 (MQ=255)


                  ggggccAAAGCGGGGGGGAAAGGGGCGGCCGTTTCCATCTTGCCTCAAATAGCCGGGGGG.GCG.GGGGGGGGGG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCg                                                                                      <  1:4260571/97‑1 (MQ=12)


                        aagccGGAGGGACAGGGGCAGGCCATTT.CATCTTGCCTAAAATACCCCGGGGG.TCC.GGGGGCGGGG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGaa                                                                               <  2:9023293/98‑1 (MQ=21)


                         acccGGGGGGCCAAGGCCAGGCCTTTT.CATCTGGCCTAAAATCCCCGGGGGG.TCG.GGGGGGGGAC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGaaa                                                                              <  1:8263883/99‑1 (MQ=16)


                         acccGGAGGGACAATGGCAGGCCATTT.CATCTTCCCTCAAATATCCCGGGGG.TCG.GGGGGCGAAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGaaa                                                                              <  2:8661561/99‑1 (MQ=255)


                           cgggAGGGACAAGGGCAGGCCTTTT.CATCTTGCCTCAAATACCCGGGGGG.TCC.GGGGGGGGGC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATc                                                                            <  2:8165146/99‑1 (MQ=21)


                             ggAGGGACAATGGCGGGCCCTTT.CATCTTGCCTCAAATACCCGGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCAc                                                                          <  2:5301917/101‑1 (MQ=25)


                              gAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCCCCGCGCCGCCGCGGCGGAAACACt                                                                         >  2:3211888/1‑101 (MQ=18)


                                gggACAGTGGCAGGCCTTTT.CATCTTGCCTCAAATACCCGGGGGG.CCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTg                                                                       <  2:8359206/101‑1 (MQ=25)


                                gggACAAGGGCAGGCCATTT.CATCTTGCCTAAAATATCCGGGGGG.TCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTg                                                                       <  2:5225772/101‑1 (MQ=25)


                                  gACAAGGGCGGGCCTTTT.CATCTTGCCTCAAATACCCCGGGGG.TCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGcc                                                                     <  2:5863984/101‑1 (MQ=25)


                                   ccAAGGGCAGGCCATTT.CATCTTGCCTTGAATACCCGGGGGG.TCC.GGGGGGGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCg                                                                    <  2:1688429/100‑1 (MQ=25)


                                       gggCAGGCCATTT.CATCTGGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACt                                                                <  2:7435824/100‑1 (MQ=255)


                                        ggCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCCCGGCGCCGCCGCGGCGGAAACACCTGACGCAcct                                                               >  1:8012219/1‑99 (MQ=17)


                                         gCAGGCCTTTT.CATCTTGCCTCAAATCTCCCGGGGG.TCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTtc                                                              <  2:8400600/101‑1 (MQ=255)


                                         gCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCGCCGCGCGGCCGCGGCGGAAACACCTGCCCAACTtc                                                              >  2:4407774/1‑101 (MQ=17)


                                          cgggCCTTTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTtct                                                             <  1:5641069/99‑1 (MQ=255)


                                            ggCCATTT.CATCTTGCCTAAAATACCCGGGGGG.TCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.cc                                                          <  1:6855672/101‑1 (MQ=25)


                                               ctttt.CATCTGGCCTCAAATACCCGGGGGG.CCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCcac                                                       <  1:2710224/99‑1 (MQ=25)


                                               cATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GGCCCGGCGGGGCCGCGGGGGGAACACCTTCCTCACTTCT.ccccc                                                       >  1:9102018/1‑99 (MQ=2)


                                                tttt.CTTCTTGCCTCAAATACCCCGGGGG.TCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCcaca                                                      <  1:1391680/100‑1 (MQ=255)


                                                tttt.CATCTTGCCTCAAATATCCGGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCcaca                                                      <  1:3942032/100‑1 (MQ=255)


                                                aTTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCCCGGCGCGGCCCGGGCGGAAACAACTGCCGAACTTCT.CCccca                                                      >  1:4205030/1‑101 (MQ=17)


                                                 ttt.CATCTTGCCTCAATTATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACaa                                                     <  2:5764853/101‑1 (MQ=255)


                                                 ttt.CATCTGCCCTAAAATCCCCGGGGGG.CCC.GGGGGCGGAC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACaa                                                     <  2:6313470/101‑1 (MQ=25)


                                                 attccttCTTGCCTCAAACCCCCGGGGGG.CCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCcaca                                                      <  2:7206017/95‑1 (MQ=25)


                                                 agt.CATCGTGCCTCAAAGCTCCCGGGGG.TCG.GGGGGGGGAG.CCCCC..GGCGGGTA.GCCTCGGCGCAGCCGAGGCGAAATCCCTTGCCGAACTTCT.CCCACaa                                                     <  2:4287731/99‑1 (MQ=25)


                                                  tt.CTTCTCGCCACAAAT.CCCCGGGGG.GCC.GGGGGGGGGGCCCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACaaa                                                    <  1:6927812/101‑1 (MQ=21)


                                                  tt.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGCGGCCCCGGGGC.GCCCGGGCGGAAGCACTTCGCGAACTTCT.ccccccac                                                    >  1:5316292/1‑96 (MQ=9)


                                                   t.CAGCTTGCCTCAAATACCCCGGGGG.CCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAAt                                                   <  2:2795462/101‑1 (MQ=255)


                                                      aTCTTGCCTCAAATATCCCGGGGG.TCG.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATcc                                                 <  2:8513068/101‑1 (MQ=255)


                                                         ttcccTCAAATGCCCGGGGGG.CCC.GGGGGCGGAG.CCCCG..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGgc                                              <  2:5063183/98‑1 (MQ=25)


                                                         ttGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GGCCCCGCGCAGCCGAGGGGGAATAACATGCCCGACTTTT.CCCACcaaaaccgc                                              >  1:1014406/1‑95 (MQ=12)


                                                             cTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCCCGGCGCCGCCGCGGCGGAAACAACTGCCGCACTTCT.CCCCCCAAACCCgccgcc                                          >  2:7078148/1‑101 (MQ=12)


                                                             cTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GCCTCCGCGCCGCCCCGGCGGAAACACCTGCCGAAACTCT.CCCACAAAACCCgccccc                                          >  1:7949233/1‑101 (MQ=12)


                                                               cAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCCCGGCGGGGCCGAGGGGGAAACAACTGCCGAACATCT.CCCCCAAAAcccaccccccg                                        >  1:2482461/1‑92 (MQ=9)


                                                                 aaatgcccGGGGG.GCCGGGGGGGGGCC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGt                                       <  1:4074878/96‑1 (MQ=25)


                                                                 aaTATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCTCGGCGCCGCCGAGGGGGAATAAACTGTCGAACTTCT.CCCCCACATCCgcgcccccgtc                                      >  2:1089218/1‑91 (MQ=12)


                                                                 aaTATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GCCCCGGCGCCGCCCGGGCGGAAACAACTCCCGCACCTCT.CCCCCCAAACCCgccgcccggc                                      >  2:3422246/1‑97 (MQ=9)


                                                                  atatCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GGCCCGGCGGCGCCGCGGCGGAAAAACTTGCCCGACATCT.CCCCCCAAACCGCGCGCCGGGcc                                     >  2:6542973/1‑101 (MQ=9)


                                                                     tCCCGGGGG.TCG.GGGGGCGCAC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCcgc                                  <  2:4134883/101‑1 (MQ=255)


                                                                     cccgggggg.CCC.GGGGGCGCAC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCcgc                                  <  2:3994330/97‑1 (MQ=37)


                                                                     acccGGGGGCCCC.GGGGGGGGAC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCcg                                   <  1:7269218/100‑1 (MQ=37)


                                                                      cccGGGGG.GCC.GGGGGGGGGC.CCCCCG.GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCcgc                                  <  1:7117643/101‑1 (MQ=37)


                                                                        cGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GCCCCGGCGCCGCCGAGGCGGAAACACTTGCCGAACTTCT.CCCACCAAACCGCCCGCCGGGCCcgcgcc                               >  2:5559878/1‑99 (MQ=21)


                                                                        cGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GCCCCGGCGCCGCCGAGGCGAAAAAACTTGCCGAACCTTT.CCCCCCCAACCGGCCCCCCGGCCcccgcc                               >  2:4782340/1‑99 (MQ=12)


                                                                        cGGGGG.TCC.GGGGGCGCAG.CCCCC..GCCGGGTC.CCCTCGGCCCACCCGAGGCGAAATCACTTGCCGAACTTCC.CCCACAAACCCGGCCGCCGGTCCCGCGTc                               <  2:4219018/101‑1 (MQ=37)


                                                                         ggggg.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GGCCCGGCGCCGCCGCGGGGGAAACACCTTCCGAACATCT.CCCCCAAACCCCCCCCCCggggccccgccc                              >  1:6017760/1‑91 (MQ=9)


                                                                         ggggg.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GCCCCGGGGCCGGCGAGGGGGAAACAATTGCCGGACCTCT.CCCCCAAAACCCGCCCCCCGGCCcccgccc                              >  1:3196670/1‑98 (MQ=9)


                                                                         ggggg.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GCCCCCGCGGGGCCCGGGCGGAAACACTTGCCGGACCTTT.CCCCCCAAACCCGGCGCCGGGCCCGCCTcc                              >  1:9021482/1‑100 (MQ=9)


                                                                            gg.TCC.GGGGGCGGAG.CCCCC..GGCGGGGG.GCCCCGGCGCCGCCGGGGGGGAAACAATCGCCGCACCTCTCCCCCCAAACCCGCCCCCCGGCccccggccaag                            >  1:3743121/1‑93 (MQ=2)


                                                                             g.TCC.GGGGGCGGAG.CCCCC..GGCGGGGC.GGCCCCGCGCCGCCCCGGGGGAAACACTTGCCGCACCTCT.CCCCCCAAAACCGCCGCCGCGCCcgcgcccaaac                          >  2:5124808/1‑94 (MQ=9)


                                                                              ggcgggggggCGCCC.CCCCG..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAg                           <  1:4615020/96‑1 (MQ=37)


                                                                                cc.GGGGGCGGAG.CCCCC..GGCGGGGC.GCCCCCGGGCGGCCCAGGGGGAAACACCTGCCGGACATCT.CCCCCCAAAACCGCCGCCCGGCCCGCCCCaaaacct                        >  1:5160184/1‑97 (MQ=2)


                                                                                 c.GGGGGGGGCC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTc                       <  2:2422288/101‑1 (MQ=255)


                                                                                 c.GGGGGCGGAC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTc                       <  2:2199867/101‑1 (MQ=255)


                                                                                  ggggggGGGGG.CCCCCG.GGCGGGTC.GCCCCGGCGCAGCCGAGGCGAAATCCCTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCtt                        <  1:8335538/100‑1 (MQ=37)


                                                                                  ggggggCGGCC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTc                       <  1:1906310/100‑1 (MQ=255)


                                                                                  ggggggCGGCC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTc                       <  2:8747734/100‑1 (MQ=255)


                                                                                    ggggGGGCG.CCCCCGGGGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTc                       <  1:1783023/101‑1 (MQ=37)


                                                                                     gggCGGAG.CCCCC..GGCGGGGG.GCCTCCGCGCCGGCGGGGGGGAAACACTTGCCGAACTTCT.CCCCCCAAACCCCCCGCCCGGCCCCCCTCGAAACTTcccc                    >  2:18266/1‑98 (MQ=255)


                                                                                      ggCGGCC.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGctc                   <  1:5046362/101‑1 (MQ=255)


                                                                                        gggccccccgc..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGctct                  <  2:165479/95‑1 (MQ=255)


                                                                                        gggcccccccg..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGctct                  <  2:4570899/95‑1 (MQ=255)


                                                                                        cGGAG.CCCCC..GGCGGGGG.GCCCCGGCGCAGGCGCGGCGGAAACACATTCCGGACTTCT.CCCCCCAAACCAGCCCCCGGGCCCCCGCCCAAGCTTCGCTCTg                 >  2:2183471/1‑101 (MQ=255)


                                                                                         gggccccccg..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTg                 <  1:8770398/96‑1 (MQ=255)


                                                                                         ggAG.CCCCC..GGCGGGTC.GCCCCGGCGCCGCCGAGGCGGAAACACTTTCCGAACTTCT.CCCCCCAAACCCGCCGCCGGGCCCCCCTCCAAACTTCGCTCTgc                >  2:6953201/1‑101 (MQ=19)


                                                                                         cgcacccccg..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTg                 <  2:7574956/96‑1 (MQ=255)


                                                                                               cccgcgggcggGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCt             <  1:3055372/95‑1 (MQ=255)


                                                                                               cccc..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTgcgcccc           <  2:3908458/101‑4 (MQ=255)


                                                                                                 cc..GGCGGGGC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCTCTcgcc         <  2:3474095/101‑1 (MQ=255)


                                                                                                  ccgggcggGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTcgc          <  2:6556621/98‑1 (MQ=255)


                                                                                                    gggcggGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTcgccg        <  1:3011787/100‑1 (MQ=255)


                                                                                                     ggcggGTC.GCCTCGGCGCAGCCGAGGCGAAATCCCTTGCCGAACTCCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTcgccgc       <  1:1682471/101‑1 (MQ=255)


                                                                                                       cggGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCa     >  1:7762077/1‑101 (MQ=255)


                                                                                                       cggGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCa     <  2:8821219/101‑1 (MQ=255)


                                                                                                       cggGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCa     >  1:6097592/1‑101 (MQ=255)


                                                                                                        gggTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAt    >  1:3692024/1‑101 (MQ=255)


                                                                                                        gggTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAt    <  2:460614/101‑1 (MQ=255)


                                                                                                         ggTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCAtt   <  1:474928/101‑1 (MQ=255)


                                                                                                          gTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTc  <  2:7850784/101‑1 (MQ=255)


                                                                                                          gTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTc  <  1:7408334/101‑1 (MQ=255)


                                                                                                          gTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTc  <  2:1920368/101‑1 (MQ=255)


TCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCATTT.CATCTTGCCTCAAATATCCCGGGGG.TCC.GGGGGCGGAG.CCCCC..GGCGGGTC.GCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCT.CCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTCGCTCTGCGCTCGCCGCCATTC  >  NC_014034/392369‑392569

Base quality scores:


ATCG

< 3 ≤


ATCG

< 14 ≤


ATCG

< 23 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG