BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1639998	236 (0.640)	168 (0.460)	23/160	23.4	0.59	intergenic (+78/‑67)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
*	?	NC_014034	= 2600949	0 (0.000)	168 (0.460)	23/160	23.4	0.59	intergenic (+11/‑130)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
Rejected: Position hash score below cutoff.

Only 100 of 314 total aligned reads displayed.


GCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGG.....G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCC  >  NC_014034/1639898‑1640088


 cTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGc                                                                                                             <  2:3851628/101‑1 (MQ=255)


     gggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGGAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAAAAT.CCC.CGGGGGCC.C..gg                                                                                                      >  1:1290509/1‑101 (MQ=38)


       gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGCAAGATGAAACCCATCCCCTT.TATCTTTCCCCCAAAAT.CCC.GGGGGGCC.C..cggg                                                                                                    >  1:7281285/1‑101 (MQ=25)


         tCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTTCCCCCAAAAT.CCC.GGGGGGCC.C..cggg.....gg                                                                                             >  1:4270334/1‑100 (MQ=37)


          cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGGAAGATGAAAACCATCCCTTT.CATCTTGCCCCCAATAT.CCC.GGGGGGCC.C..gggg.....ggg                                                                                            >  1:5488062/1‑99 (MQ=37)


          cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..gggg.....ggc                                                                                            <  2:9119857/101‑3 (MQ=255)


           ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGCAAGATGAAACCCATCCCCTT.CATCTTGCCCCAAATAT.CCC.CGGGGGCC.C..gggg.....ggcg                                                                                           >  2:2095185/1‑98 (MQ=37)


             tccgATCTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..gggg.....ggcagc                                                                                         <  1:2603552/98‑6 (MQ=255)


              cGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..gggg.....ggcagcg                                                                                        <  1:1924143/101‑7 (MQ=255)


               ggATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGAATATGAAAACCATCCCTTT.CATCTTTCCCCAAATATCCCC.GGGGGGCC.G..GGGG.....g.....cggggc                                                                                   >  2:4363115/1‑97 (MQ=25)


                gATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..gggg.....ggcagcgcc                                                                                      <  2:3558961/101‑9 (MQ=255)


                gATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAAACCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..cggg.....ggccgcgcc                                                                                      >  2:2312475/1‑93 (MQ=25)


                 aTGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGGAAGATGAAAACCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGGCC.C..gggg.....ggagcgccc                                                                                      >  2:7632739/1‑93 (MQ=25)


                           cGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGG.....GGCAC.CG.....CCCCCCGCCACtt                                                                     >  1:7347040/1‑101 (MQ=21)


                                     ggcggGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCCAATAT.CCC.CGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCCCTTCCGCCACcgg                                                           >  2:8982072/1‑101 (MQ=18)


                                     ggcggCGATATTTGGAGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCCcccccgg                                                           >  1:8849351/1‑96 (MQ=17)


                                       gggggATTTTGGGGACAAGA.CAAACCCCCCCCTTT.TCTTTTTCCCCAAAATC.CCC.GGGGGGCC.C..GGGG.....GGGCCCCC.....CCCCCCGCCACTTCCGCCACGGGGc                                                         <  1:4950533/100‑1 (MQ=255)


                                       cggGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGc                                                         >  1:7414272/1‑101 (MQ=25)


                                        ggggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCa                                                        >  2:9047172/1‑101 (MQ=25)


                                         gggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAg                                                       >  2:7546195/1‑101 (MQ=25)


                                         gggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAg                                                       >  1:2845196/1‑101 (MQ=25)


                                         gggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAg                                                       >  2:5366609/1‑101 (MQ=25)


                                          ggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAgc                                                      >  1:1752287/1‑101 (MQ=25)


                                           gATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                     >  1:4737266/1‑101 (MQ=25)


                                             tatTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                   >  2:1539840/1‑101 (MQ=25)


                                             tatTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                   >  2:8357898/1‑101 (MQ=25)


                                              atTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                  >  1:4426544/1‑101 (MQ=25)


                                              atTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                  >  2:7152512/1‑101 (MQ=25)


                                               tttGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCC.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 >  2:6501449/1‑101 (MQ=25)


                                               tttGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 >  1:5126663/1‑101 (MQ=21)


                                               ttgggggCAAGATGACCCCCATCCCTTT.CCTCTGCCCCAAAATAC.CCG.GGGGGGCCGG..GGGG.....G.....CGGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 <  2:1436375/98‑1 (MQ=255)


                                               tggggggAAAGATGAACCCCCCCCCTTT.CATCTCCCCCCAAATA..CCC.GGGGGGCC.C..GGGGGGGCAG.....CC.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 <  2:4664921/98‑1 (MQ=12)


                                                tgggggCAAGAGGAACCCCACCCTTTT.CATCTGCCCCAAAATCC.CCG.GGGGGGCCGG..GGGG.....G.....CGGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                <  1:9191086/99‑1 (MQ=255)


                                                 tGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                               >  1:7116763/1‑101 (MQ=25)


                                                 tGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                               >  1:2086035/1‑101 (MQ=25)


                                                  ggggCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                              >  2:7249915/1‑101 (MQ=25)


                                                  ggggCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                              >  1:8563532/1‑101 (MQ=25)


                                                   gggCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                             >  2:1338418/1‑101 (MQ=25)


                                                   gggCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                             >  1:9037053/1‑101 (MQ=25)


                                                    ggCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCg                                            >  2:4733379/1‑101 (MQ=25)


                                                      cAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          >  1:4005176/1‑101 (MQ=25)


                                                      cAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          >  2:1039435/1‑101 (MQ=25)


                                                       aaGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                         >  2:6226060/1‑101 (MQ=25)


                                                       aaGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                         >  1:3865379/1‑101 (MQ=25)


                                                        aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                        >  2:7382128/1‑101 (MQ=25)


                                                        aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                        >  1:6840855/1‑101 (MQ=25)


                                                        aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAC.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCACGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                        >  1:6685060/1‑101 (MQ=25)


                                                            gaccccccccccTTT.C.TCCTGCCCCAAAATC.CCC.GGGGGGGC.CGGGGGG.....G.....CGCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                    <  1:2312542/92‑1 (MQ=255)


                                                            gAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                    >  1:8167961/1‑101 (MQ=25)


                                                             aaaCCCCACCCTTTCCATCTTCCCCAAAATAC.CCG.GGGGGGCG.G..GGGG.....GCCCC.CC.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                    <  1:1342337/101‑1 (MQ=255)


                                                             aaaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                   >  2:2558581/1‑101 (MQ=25)


                                                              accccATCCCTTT.CCTTCTTCCCCAAATTC.CCG.GGGGGGCC.CGGGGGG.....G.....CGCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                   <  2:691871/99‑1 (MQ=255)


                                                              aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                  >  2:3372767/1‑101 (MQ=25)


                                                              aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                  >  2:5143506/1‑101 (MQ=25)


                                                              aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                  >  1:8759081/1‑101 (MQ=25)


                                                              aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                  >  2:8229702/1‑101 (MQ=25)


                                                               aCCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACNANGga                                 >  1:4148239/1‑101 (MQ=21)


                                                               aCCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGga                                 >  2:6341714/1‑101 (MQ=25)


                                                                cccctcttttt.CATCGCGCCCAAAAT.C.CCG.GGGGGGCC.C..GGGG.....G.....CGCCCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                                <  1:2988276/93‑1 (MQ=255)


                                                                cccATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                                >  1:5736475/1‑101 (MQ=25)


                                                                  cATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                              >  2:5787473/1‑101 (MQ=25)


                                                                   aTCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                             >  2:8063806/1‑101 (MQ=21)


                                                                    tCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                            >  1:1169309/1‑101 (MQ=25)


                                                                       cTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                         >  2:2473384/1‑101 (MQ=25)


                                                                       cTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                         >  2:5233704/1‑101 (MQ=25)


                                                                       cTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                         >  1:7849319/1‑101 (MQ=25)


                                                                        ttt.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                        >  2:4330639/1‑101 (MQ=25)


                                                                         tt.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                       >  1:1038152/1‑101 (MQ=25)


                                                                         tt.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                       >  2:3006380/1‑101 (MQ=25)


                                                                         tt.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                       >  1:5951726/1‑101 (MQ=25)


                                                                          t.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                      >  1:7959264/1‑101 (MQ=25)


                                                                          t.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                      >  1:8257205/1‑101 (MQ=25)


                                                                          t.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                      >  1:62383/1‑101 (MQ=25)


                                                                            cATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                     >  2:7280503/1‑101 (MQ=25)


                                                                            cATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                     >  1:3498126/1‑101 (MQ=25)


                                                                            cATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                     >  2:6062034/1‑101 (MQ=25)


                                                                             aTCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  1:6169704/1‑101 (MQ=25)


                                                                             aTCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCAGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  2:3711283/1‑101 (MQ=25)


                                                                               cctGCCCCAAAATC.CCC.GGGGGGGC.C..GGGG.....GGC...CGCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                   <  1:833962/99‑1 (MQ=255)


                                                                                ttGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                 >  2:6608474/1‑101 (MQ=25)


                                                                                ttGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                 >  1:3581661/1‑101 (MQ=25)


                                                                                ttGCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                 >  2:4485160/1‑101 (MQ=25)


                                                                                  gCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCacaa               >  2:673525/1‑101 (MQ=25)


                                                                                  gCCCCAAATAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa               >  1:327259/1‑101 (MQ=25)


                                                                                      ccaaaagcccc.GGGGGGCC.C..GGGG.....GGC...CGCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGa             <  2:6181352/93‑1 (MQ=255)


                                                                                       aaaTAT.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc          >  1:4609545/1‑101 (MQ=25)


                                                                                         atat.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg        >  2:4949334/1‑101 (MQ=37)


                                                                                         atat.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg        >  1:7507968/1‑101 (MQ=37)


                                                                                          tat.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGa       >  1:7639179/1‑101 (MQ=37)


                                                                                          tat.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGa       >  1:1615830/1‑101 (MQ=37)


                                                                                          atcgccc.GGGGGGCC.C..GGGG.....GCCC..CGCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt         <  2:3628555/97‑1 (MQ=255)


                                                                                           ggcggggggggggCC.C..GCCC.....C.....CC.....CCCCCCGCCCCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg    <  1:6501701/94‑1 (MQ=255)


                                                                                           at.CCC.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcccagc      >  2:4189053/1‑97 (MQ=25)


                                                                                              ccc.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg    >  2:2877552/1‑101 (MQ=37)


                                                                                               cc.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc   >  2:6564654/1‑101 (MQ=37)


                                                                                               cc.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc   >  2:8833/1‑101 (MQ=37)


                                                                                                c.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  2:3123419/1‑101 (MQ=37)


                                                                                                c.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  2:5697603/1‑101 (MQ=37)


                                                                                                c.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  1:6730686/1‑101 (MQ=37)


                                                                                                c.GGGGGGCC.C..GGGGGGCA.G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  2:4604251/1‑101 (MQ=37)


GCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCC.GGGGGGCC.C..GGGG.....G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCC  >  NC_014034/1639898‑1640088

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG