New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_014034 | = 2600949 | 0 (0.000) | 168 (0.460) | 23/158 | 23.2 | 0.45 | intergenic (+11/‑130) | RCAP_rcc02424/surE | short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE |
? | NC_014034 | = 2950747 | 408 (0.890) | intergenic (+90/‑70) | RCAP_rcc02761/RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein | |||||
Rejected: Position hash score below cutoff. |
GCCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGCCCCTGCC > NC_014034/2600849‑2600959
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gccgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACgggggg > 1:4917899/1‑101 (MQ=255)
gccgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACgggggg > 1:544550/1‑101 (MQ=255)
ccgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggc < 2:6986121/101‑2 (MQ=255)
ccgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggc < 1:8445940/101‑2 (MQ=255)
ccgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggc < 1:7585622/101‑2 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct < 1:1431109/101‑3 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct > 2:4772332/1‑99 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct < 2:7953498/101‑3 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct < 1:2785286/101‑3 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct < 2:7673232/101‑3 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct > 2:7627603/1‑99 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct < 1:8651200/101‑3 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct > 2:4795426/1‑99 (MQ=255)
cgTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggct < 1:6271234/101‑3 (MQ=255)
gTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctc > 2:4882172/1‑98 (MQ=255)
gTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctc > 1:5877879/1‑98 (MQ=255)
gTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctc < 2:8421623/101‑4 (MQ=255)
gTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGc > 2:75949/1‑101 (MQ=255)
gTGCGGGCGAGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGACGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctc > 2:5954189/1‑98 (MQ=255)
tGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctct < 2:3749003/101‑5 (MQ=255)
tGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctct < 2:3559821/101‑5 (MQ=255)
tGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctct < 2:3207439/101‑5 (MQ=255)
tGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctct < 1:1655144/101‑5 (MQ=255)
tGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctct < 1:6311054/101‑5 (MQ=255)
gCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctg > 1:8425314/1‑96 (MQ=255)
cGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgc > 2:1004352/1‑95 (MQ=255)
cGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgc < 1:3773030/101‑7 (MQ=255)
gggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcc < 2:8807838/101‑8 (MQ=255)
gggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcc > 1:2590293/1‑94 (MQ=255)
gggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcc > 2:7772175/1‑94 (MQ=255)
gggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcc > 1:472759/1‑94 (MQ=255)
gggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcc < 2:621595/101‑8 (MQ=255)
gggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcc > 1:5956494/1‑94 (MQ=255)
ggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgccc > 1:4464040/1‑93 (MQ=255)
gcgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcccc < 2:7381564/101‑10 (MQ=255)
gcgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcccc < 2:7086638/101‑10 (MQ=255)
gcgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcccc < 2:4107371/101‑10 (MQ=255)
gcgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgcccc < 2:3901132/101‑10 (MQ=255)
cgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgccccc < 1:5002909/101‑11 (MQ=255)
cgcgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACggggggctctgccccc < 2:7828159/101‑11 (MQ=255)
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GCCGTGCGGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGCCCCTGCC > NC_014034/2600849‑2600959
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 24 ≤
ATCG
< 31 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
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