New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1103354 =318 (0.780)50 (0.120) 18/178 27.9 0.16 intergenic (‑354/+64) ugpB/regA2 sn‑glycerol‑3‑phosphate‑binding periplasmic protein ugpB/photosynthetic apparatus regulatory protein RegA
?NC_014034 2330307 = 189 (0.410)intergenic (+282/+30) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 241 total aligned reads displayed.

GCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGG..G....G.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGTCG  >  NC_014034/2330213‑2330407
                                                                                                         |                                                                                                      
  cGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGc                                                                                                    >  1:8434663/1‑101 (MQ=25)
      gcgcgcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCCCCGAg                                                                                                <  1:2246618/101‑1 (MQ=21)
        gcgcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGccccggc                                                                                              >  2:1190423/1‑96 (MQ=21)
           cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.Tc                                                                                          <  1:7147546/101‑1 (MQ=25)
           cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.Tc                                                                                          <  1:4130349/101‑1 (MQ=25)
           cATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGcccggggggc                                                                                           >  1:4481913/1‑93 (MQ=18)
               cGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGCCGGGGCG.TCGccc                                                                                      >  1:5691122/1‑100 (MQ=18)
               cGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGGgggggccccc                                                                                       >  1:2712713/1‑93 (MQ=18)
                ggggCCCCGGATCCCCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTc                                                                                     <  2:3829635/101‑1 (MQ=21)
                ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTc                                                                                     <  2:1704105/101‑1 (MQ=25)
                ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTc                                                                                     <  1:3365797/101‑1 (MQ=25)
                ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGGGGCA.CCGcccc                                                                                     >  2:2682938/1‑99 (MQ=18)
                 gggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGCgggggcgccccc                                                                                     >  1:61445/1‑91 (MQ=18)
                  ggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.gg                                                                                  <  1:7490031/101‑1 (MQ=25)
                  ggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGCCGGGGGA.GCGCCCC.gg                                                                                  >  1:6795955/1‑101 (MQ=16)
                   gCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGc                                                                                 <  2:4392016/101‑1 (MQ=25)
                   gCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGc                                                                                 <  1:5012894/101‑1 (MQ=25)
                    ccccGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCg                                                                                <  2:4097738/101‑1 (MQ=25)
                      ccGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGaa                                                                              <  2:6795839/101‑1 (MQ=25)
                        ggATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGCCGGGGCC.GCGCCTcccggcaca                                                                             >  2:321274/1‑93 (MQ=12)
                         gATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGCCGCGGCA.CCGCCCC.gcggcaaac                                                                           >  2:7264789/1‑93 (MQ=12)
                          aTCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGCGGGA.GACCCTC.GGCGacaacc                                                                          >  2:2095552/1‑96 (MQ=12)
                            cACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCt                                                                        <  1:6518239/101‑1 (MQ=25)
                            cACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCt                                                                        <  1:985814/101‑1 (MQ=25)
                             cccGGCGGCCGGGGCGGCTTGCACCTGGGGCCAAAGACCCGGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCtt                                                                       <  2:3596803/100‑1 (MQ=18)
                             cccGGCGCCCCGGGCGGCTTTCCCCGGGGGCCAAAGACCCGGGGGGTCCGGGGGCG....GAC...CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCtt                                                                       <  2:4565096/100‑1 (MQ=16)
                              ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTa                                                                      <  1:5161404/101‑1 (MQ=25)
                              ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTa                                                                      <  2:6209757/101‑1 (MQ=25)
                                ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGt                                                                    <  1:8085192/101‑1 (MQ=25)
                                ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGGCGGGGGA.ACGCCCC.CGCGAAAACCCCTact                                                                    >  1:7911744/1‑99 (MQ=9)
                                ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGAGGCA.TCGCCCC.TGCGGAATCCCTTAGt                                                                    >  2:5555446/1‑101 (MQ=18)
                                 gcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTa                                                                   <  2:2502433/101‑1 (MQ=25)
                                 gcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTa                                                                   <  2:5068839/101‑1 (MQ=25)
                                  cggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTaa                                                                  <  1:8831620/101‑1 (MQ=25)
                                  cggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTaa                                                                  <  1:462729/101‑1 (MQ=25)
                                   ggcCCGGGCGGCTTTCCCCTGGGGCCAAAGAGCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTaaa                                                                 <  2:2919205/101‑1 (MQ=21)
                                   ggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCCAGGCC.TCGCCTC.GGCGCAAACCCTTCGTaaa                                                                 >  2:9098971/1‑101 (MQ=12)
                                   ggcCCGGGCGGCTTTCACCCGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGCGGGA.TCGCCCC.CGCGGAAACCCTTCGTaaa                                                                 >  2:853148/1‑101 (MQ=9)
                                    gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAg                                                                <  2:841425/101‑1 (MQ=25)
                                    gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAg                                                                <  1:595603/101‑1 (MQ=25)
                                      cggggCGGCTTTCCCCGGGGGCCAAAGACCCGGGGGGTCGGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAc                                                              <  1:1722902/99‑1 (MQ=16)
                                       cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAcc                                                             <  1:631406/101‑1 (MQ=25)
                                       cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAcc                                                             <  1:8646973/101‑1 (MQ=25)
                                       cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGAGGCA.TCGCCCC.GGCGGAAACCCCTAGTAAAGaac                                                             >  1:1506806/1‑99 (MQ=16)
                                       cGGGCGGCTTTCACCGGGGGCCAAAGATCCGGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAcc                                                             <  1:2336807/101‑1 (MQ=21)
                                        gggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAccg                                                            <  2:4944860/101‑1 (MQ=25)
                                          gcggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGCGGCA.GCGCCTC.GGCGACAACCCTTAGTTAACAccggc                                                          >  2:2600063/1‑99 (MQ=12)
                                          gcgccTTCCCCCGGGGGCAAAAGA.CCCGGGGGGCCCGGG..G....GCGGACCCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAccgcc                                                          <  1:3250187/101‑1 (MQ=16)
                                            ggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGAGGGA.GCGCCCC.GCCGGAATCCCTTTGTTAAGaaacgccc                                                        >  1:2001755/1‑94 (MQ=9)
                                             gcTTCCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAccgcccgc                                                       <  2:3547706/101‑1 (MQ=21)
                                               tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCgg                                                     <  2:1559992/101‑1 (MQ=21)
                                               tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGAGGCA.TCGCCCC.GGCGGAAACCCTTAGTAAAAACCGCCCCCgg                                                     >  2:1967132/1‑101 (MQ=16)
                                                 tcgccgggggCCAAAGATCCGGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGAc                                                   <  1:5600589/95‑1 (MQ=21)
                                                     cTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAggg                                               <  1:932724/101‑1 (MQ=21)
                                                     cTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGGGGGA.TCGCCCC.GGCGGAAAACCCTAGTAAAAACCGCCCGCGGGGAggg                                               >  1:5080610/1‑101 (MQ=2)
                                                     cTGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGAGGGC.TCGCCTC.GGCGGAAAACCCTAGTAAAAAACGCCCGCGGACAggg                                               >  1:300287/1‑101 (MQ=9)
                                                      tGGGGCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGGGGGA.TCGCCCC.CGCGGAAACCCTTTGTAAAAACCGCCCCCCGGCAgggg                                              >  1:1030172/1‑100 (MQ=2)
                                                       ggggCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGCCGGGGGA.TCGCCTC.CGCGGAATCCCCTCGTAAAAAACGCCCGCCGACCggggg                                             >  1:547219/1‑99 (MQ=2)
                                                        gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATc                                            <  1:2600145/101‑1 (MQ=21)
                                                        gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGCCGCGGGACCCGCCCC.CG.GAAATCCCCTCGTAAAAAACGCCCGCCGACAGGGaac                                            >  1:8562623/1‑99 (MQ=2)
                                                        gggCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAACGCCCGCGGACAGGGGTc                                            >  2:3053542/1‑101 (MQ=18)
                                                         ggCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCCAGGGA.TCGCCTC.GGCGAAAACCCTTCGTAAAGAACCCCCCCGGCCACGGGTcc                                           >  2:3687904/1‑101 (MQ=2)
                                                          gCCAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCg                                          <  1:3913409/101‑1 (MQ=21)
                                                           ccAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGCCCGGGGA.TCGCCTCTGGCCAAA.CCCTTACGAAACAACCCCCGCGGACAggggaccca                                         >  2:7092462/1‑95 (MQ=2)
                                                           ccAAAGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGAGGCA.TCGCCTC.CGCGAAAACCCCTAGTAAAAACCGCCCGCGGGCAGGGaggcga                                         >  1:8138932/1‑96 (MQ=12)
                                                            cAAAGATCCCGGGGGTCGGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGaa                                        <  2:7300537/101‑1 (MQ=21)
                                                             aaaGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAg                                       <  2:8231772/101‑1 (MQ=21)
                                                             aaaGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAg                                       <  2:4819042/101‑1 (MQ=21)
                                                             aaaGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCCAGGGG.GCGCCCC.CGCGGAAACCCTTAGTAAAAAACGCCCCCGGACAGGGAGCCGAAg                                       >  1:7441682/1‑101 (MQ=2)
                                                               aGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGGGCCGGGGGA.TCGCCCC.GGCGAAAACCCTTAGTAAAAAACGCCCCCGGACAGGGAGCCGGAggg                                     >  1:3604370/1‑100 (MQ=9)
                                                               aGATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCCGGGCA.TCGCCCC.GGGGAAAACCCTTTGTAAAAACCGCCCGCGGGCAGGGAACCGaaagg                                     >  1:1156002/1‑98 (MQ=9)
                                                                gATCCCGGGGGTCCGGGG..GCGGAG.....CCCCCGGCGGGGCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAAACCGCCCGCGGGCAGGGAGCCGaaaggc                                    >  2:6858055/1‑97 (MQ=16)
                                                                               cgggggcggag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGa                       <  2:1030154/91‑1 (MQ=255)
                                                                                 ggggcggag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATc                     <  2:7358390/93‑1 (MQ=255)
                                                                                  gggcggag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCa                    <  2:6609037/94‑1 (MQ=255)
                                                                                   ggcggag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCAc                   <  1:1405047/95‑1 (MQ=255)
                                                                                    gcggag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCCC.CGCGAAATCCCTTAGTAAAGACCGCCCGCCGACAGGGATCCGAAGGGCGCCCTCTTCCGGATCAcc                  >  2:7569182/6‑101 (MQ=37)
                                                                                     cggag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAAAACGCCCGCGGACAGGGATCCGAAGGGCGCCTTCTTCGGGGTTAccc                 >  2:6734976/5‑101 (MQ=37)
                                                                                      ggag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCg                <  2:2243939/98‑1 (MQ=255)
                                                                                      ggag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAAACCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGGCGCCTTCTTCGGGATCACCCg                >  2:7882979/4‑101 (MQ=255)
                                                                                       gag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAAACCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGCAGGGCGCCTTCTTCCGGATCAccccc               >  2:3366588/3‑99 (MQ=255)
                                                                                       gag.....CCCCCGGCGGGGCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGAACGCCCGCGGACAGGGGTCCGAAGGTCGCCCTCTTCGGGGTCACCCGc               >  2:244776/3‑101 (MQ=255)
                                                                                        ag.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCt              <  2:2044929/100‑1 (MQ=255)
                                                                                               cccccGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGt            <  2:8562238/101‑1 (MQ=255)
                                                                                                 cccGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTc          <  1:3690617/101‑1 (MQ=255)
                                                                                                 cccGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTc          <  2:2324829/101‑1 (MQ=255)
                                                                                                  ccGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTcc         <  1:3125603/101‑1 (MQ=255)
                                                                                                  ccGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTcc         <  2:5637459/101‑1 (MQ=255)
                                                                                                  ccGGCGGGTCGCCGAGGCA.TCCCCTC.GGCGAAATCCCCTTGTAAAGACCGCCCGCGGACAGGGATCCCCAGGTCGCCTTCTTTGGGAGCCCCCGCTGCTcc         >  2:1497825/1‑101 (MQ=255)
                                                                                                   cggcggGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTccc        <  1:4743308/101‑1 (MQ=255)
                                                                                                     gcggGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCg      <  2:4201170/101‑1 (MQ=255)
                                                                                                      cggGTTGCCGAGGCA.TCGCCTT.GGCGAAATCCCTTACTAAAGACCGTCCGCGGACAGGGATCCGAAGGGCGCCTTCTTCGGGATCACCCGCTGATCCCCgg     >  2:7443206/1‑101 (MQ=255)
                                                                                                      cggGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCgg     >  2:9004466/1‑101 (MQ=255)
                                                                                                       gggTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGt    >  2:5946971/1‑101 (MQ=255)
                                                                                                        ggTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGTc   >  1:3979153/1‑101 (MQ=255)
                                                                                                        ggTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGTc   <  2:4486630/101‑1 (MQ=255)
                                                                                                        ggTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGTc   >  2:2798001/1‑101 (MQ=255)
                                                                                                         gTCGCCGAGGCA.TCGCCTC.GTCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGTCg  <  1:7255226/101‑1 (MQ=255)
                                                                                                         gTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGTCg  >  2:1111475/1‑101 (MQ=255)
                                                                                                         gTCGCCGAAGCA.TCGCCTC.GGCGAAATTCCTTAGTAAAGACCGCCCGCTGGCAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGTCg  <  2:4030837/101‑1 (MQ=255)
                                                                                                         |                                                                                                      
GCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGG..G....G.....CCCCCGGCGGGTCGCCGAGGCA.TCGCCTC.GGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTCGCCTTCTTCGGGATCACCCGCTGTTCCCCGGTCG  >  NC_014034/2330213‑2330407

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG