New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1224228307 (0.940)37 (0.110) 12/142 27.5 0.13 intergenic (‑100/+69) hisF/hisA imidazole glycerol phosphate synthase subunit HisF/1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino] imidazole‑4‑carboxamide isomerase
?NC_014034 1303880 = 195 (0.430)intergenic (+67/+90) urtE/RCAP_rcc01231 urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
Rejected: Position hash score below cutoff.

Only 100 of 349 total aligned reads displayed.

GCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCTC..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCC....GCCAAGATGGGGG..GC.CCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAG  >  NC_014034/1303782‑1303973
                                                                                                    |                                                                                                    
gcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCt                                                                                                      <  2:8432890/101‑1 (MQ=37)
 cgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGGTATTTGGGGCACGATAAACCCCATCCtt                                                                                                     >  2:681348/1‑101 (MQ=37)
  gAAACCCTGCGCGGCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCttt                                                                                                    <  2:5636238/101‑1 (MQ=25)
  gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCttt                                                                                                    <  1:771737/101‑1 (MQ=37)
  gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATACTTGGGGCAAGATAAACCCCATCCtgt                                                                                                    >  2:5936102/1‑99 (MQ=25)
  gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACACCCGGGATATTTGGGGCAAGATAAACCCCATCCttt                                                                                                    >  1:8230329/1‑101 (MQ=37)
  gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCCGCTTCGCCTCACCCCCGGGAAATTTGGGGCAAGATAAACCCCCCCCttt                                                                                                    >  2:1627125/1‑101 (MQ=25)
  caagcccTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGATAAACCCCATCCttt                                                                                                    <  1:1871171/97‑1 (MQ=25)
   aaaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTc                                                                                                   <  1:5258603/101‑1 (MQ=37)
   aaaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTc                                                                                                   <  1:8299789/101‑1 (MQ=37)
   aaaCCCGGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTc                                                                                                   <  2:5884976/101‑1 (MQ=25)
    aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCa                                                                                                  >  1:1156236/1‑101 (MQ=37)
    aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCa                                                                                                  <  1:5565005/101‑1 (MQ=37)
    aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCa                                                                                                  >  1:5177448/1‑101 (MQ=37)
     aCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCAc                                                                                                 >  2:2472102/1‑101 (MQ=37)
     aCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCAc                                                                                                 <  2:3809843/101‑1 (MQ=37)
       ccTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCt                                                                                               >  1:1628517/1‑101 (MQ=37)
        cTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCtt                                                                                              <  1:1366262/101‑1 (MQ=37)
           cgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGGTATTTGGGGCAAGATAAACCCCATCCTTTCAACTTGcc                                                                                           >  2:7898614/1‑101 (MQ=25)
             cgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGc                                                                                         <  2:4746802/101‑1 (MQ=37)
              gcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCa                                                                                        >  1:3209355/1‑101 (MQ=37)
              gcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCa                                                                                        >  1:4870263/1‑101 (MQ=37)
                 gTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCCTCCTTTCACCTTGCCGCCAat                                                                                     >  2:7824882/1‑101 (MQ=25)
                 gTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCaaag                                                                                     >  1:2177204/1‑100 (MQ=25)
                 gTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCaaaa                                                                                     >  1:8794902/1‑100 (MQ=25)
                 gTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAat                                                                                     <  1:6719587/101‑1 (MQ=37)
                  tGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCACGATAAACCCCATCCTTTCACCTTGCCGCAAata                                                                                    <  1:6446695/101‑1 (MQ=37)
                  tGGTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAata                                                                                    >  2:8262057/1‑101 (MQ=25)
                  tGGTCAGCGTTTAGGCAAGGGCGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAata                                                                                    <  1:1475977/101‑1 (MQ=37)
                   ggTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAatat                                                                                   <  2:89042/101‑1 (MQ=37)
                    gTCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATc                                                                                  >  2:6109875/1‑101 (MQ=25)
                     tCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATcc                                                                                 >  2:456054/1‑101 (MQ=25)
                     tCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATcc                                                                                 <  2:3184126/101‑1 (MQ=37)
                     tCAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATcc                                                                                 <  2:1707809/101‑1 (MQ=37)
                      cAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAaaatacg                                                                                >  2:6939422/1‑98 (MQ=25)
                      cAGCGTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATccc                                                                                <  1:8604357/101‑1 (MQ=37)
                          gTTTAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggg                                                                            >  2:6415328/1‑101 (MQ=25)
                             tAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCggggggg                                                                         >  2:8068786/1‑100 (MQ=25)
                             tAGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGt                                                                         <  1:2865006/101‑1 (MQ=37)
                              aGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTg                                                                        >  1:275604/1‑101 (MQ=25)
                              aGGCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTg                                                                        <  2:5782106/101‑1 (MQ=37)
                               ggCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa                                                                       <  1:6846688/101‑1 (MQ=37)
                               ggCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa                                                                       <  1:8520792/101‑1 (MQ=37)
                               ggCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa                                                                       <  1:1178906/101‑1 (MQ=37)
                               ggCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGa                                                                       >  1:3515618/1‑101 (MQ=25)
                                gCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCTCCTTGCCGCAAATATCCCGGGGGGTGaa                                                                      >  2:7228490/1‑101 (MQ=25)
                                gCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa                                                                      <  1:390109/101‑1 (MQ=37)
                                gCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa                                                                      >  2:2266518/1‑101 (MQ=25)
                                gCAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa                                                                      <  2:482063/101‑1 (MQ=37)
                                 cAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCCCCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAt                                                                     <  1:6320124/101‑1 (MQ=25)
                                 cAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAt                                                                     >  2:4020348/1‑101 (MQ=25)
                                 cAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAt                                                                     <  2:6651776/101‑1 (MQ=37)
                                 cAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAt                                                                     <  2:9168403/101‑1 (MQ=37)
                                 cAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAt                                                                     <  1:977965/101‑1 (MQ=37)
                                 cAAGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAt                                                                     <  1:8395626/101‑1 (MQ=37)
                                  aaGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt                                                                    >  2:5416312/1‑101 (MQ=25)
                                  aaGGGGGCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt                                                                    <  2:2848877/101‑1 (MQ=37)
                                    gggggCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTgg                                                                  <  1:2507663/101‑1 (MQ=37)
                                    gggggCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTgg                                                                  >  1:2597209/1‑101 (MQ=37)
                                    gggggCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTgg                                                                  <  2:5492778/101‑1 (MQ=37)
                                    gggggCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTgg                                                                  <  2:3375960/101‑1 (MQ=37)
                                    gggggCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTgg                                                                  <  2:8164512/101‑1 (MQ=37)
                                      gggCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc                                                                <  2:1895083/101‑1 (MQ=37)
                                      gggCGCTGCCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc                                                                <  2:7097983/101‑1 (MQ=37)
                                                                            tttGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATAGCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGgggcg                          <  1:5822373/101‑1 (MQ=9)
                                                                               ggggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGgggcgggc                       >  1:604855/1‑101 (MQ=14)
                                                                               ggggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGgggcgggc                       >  1:83666/1‑101 (MQ=14)
                                                                                gggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggcc                      <  2:1284929/101‑1 (MQ=14)
                                                                                gggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggcc                      <  1:8965104/101‑1 (MQ=14)
                                                                                   cAAGATAACCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAGTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgca                   <  1:31446/101‑1 (MQ=9)
                                                                                   cAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgca                   <  1:3560546/101‑1 (MQ=14)
                                                                                   cAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgca                   >  2:958330/1‑101 (MQ=14)
                                                                                    aaGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcag                  >  2:7723228/1‑101 (MQ=14)
                                                                                     aGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagg                 >  1:8905099/1‑101 (MQ=14)
                                                                                       aTAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggc               >  2:7566341/1‑101 (MQ=14)
                                                                                        tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCggggcgcagggcc              >  2:1071640/1‑101 (MQ=9)
                                                                                        tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggcc              >  1:6773239/1‑101 (MQ=14)
                                                                                         aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccg             <  1:4511634/101‑1 (MQ=14)
                                                                                         aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccg             >  2:5995368/1‑101 (MQ=14)
                                                                                         aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccg             <  2:3468899/101‑1 (MQ=14)
                                                                                          aaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccgc            >  1:4073710/1‑101 (MQ=14)
                                                                                           aCCCCGTCTTTGCACCTGGCCGCCAAGATCCCGGGGGGTGAATGGGGCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCgggccgcagggccgca           <  2:2972362/101‑1 (MQ=2)
                                                                                            ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAc          <  1:5442234/101‑1 (MQ=14)
                                                                                            ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAc          <  2:6293371/101‑1 (MQ=14)
                                                                                             cccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAcc         <  1:9061563/101‑1 (MQ=14)
                                                                                             cccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAcc         <  2:5030561/101‑1 (MQ=14)
                                                                                              ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAccc        >  2:8669336/1‑101 (MQ=14)
                                                                                              ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAccc        >  1:3692810/1‑101 (MQ=14)
                                                                                              ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAccc        >  1:4305165/1‑101 (MQ=14)
                                                                                               cacccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCt       <  1:7548151/98‑1 (MQ=9)
                                                                                               cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGAACCCt       >  2:8574653/1‑101 (MQ=9)
                                                                                               cATCATTCCACTTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGAAGCGCCCCCTTTTCGGGGCGGGCCGCACAGCGCCACCCt       >  2:2096397/1‑101 (MQ=2)
                                                                                                aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTg      <  1:2087196/101‑1 (MQ=14)
                                                                                                aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTg      >  1:4773320/1‑101 (MQ=9)
                                                                                                  ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTc    <  1:1003133/101‑1 (MQ=14)
                                                                                                  ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTc    >  1:4653766/1‑101 (MQ=14)
                                                                                                   cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa   >  1:7028117/1‑101 (MQ=14)
                                                                                                    tttCACTTTGCCTCAATTTTCCCGGGGGGTTAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCTGGCCGCAGGGCCGCACCCTGTCAg  <  2:4385894/101‑1 (MQ=9)
                                                                                                    tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAg  >  2:2590636/1‑101 (MQ=14)
                                                                                                    tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGGGCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAg  >  2:4317266/1‑101 (MQ=14)
                                                                                                    |                                                                                                    
GCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCTC..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCC....GCCAAGATGGGGG..GC.CCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAG  >  NC_014034/1303782‑1303973

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG