BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1253880	NA (NA)	64 (0.160)	8/176	34.3	0.26	intergenic (+38/+53)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	= 2577184	360 (0.790)	64 (0.160)	8/176	34.3	0.26	intergenic (+106/‑323)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 404 total aligned reads displayed.


ATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..G..CCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCGGGGGTCCG  >  NC_014034/2577086‑2577284


   aaaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCg                                                                                                   <  1:7279047/101‑1 (MQ=255)


    aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGt                                                                                                  <  2:6338296/101‑1 (MQ=255)


    aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCC.CCCCCCCCGccg                                                                                                  >  1:1201816/1‑99 (MQ=37)


       ggCCGCCTTCGGGCGGTCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTAtt                                                                                               <  1:7442207/101‑1 (MQ=37)


       ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCGGGGGG..G..CCCCCCCCC.CACCCCCCGCgcact                                                                                               >  2:6442486/1‑97 (MQ=37)


         ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCGCCACCCCCGGCGCAttt                                                                                              >  2:1572324/1‑101 (MQ=37)


         ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTg                                                                                             <  2:3330904/101‑1 (MQ=255)


         ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTg                                                                                             <  2:6996994/101‑1 (MQ=255)


         ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCC.CACCCCCGGCGGATTTg                                                                                             >  2:1964785/1‑101 (MQ=37)


          cgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGc                                                                                            <  2:5232903/101‑1 (MQ=255)


           gccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCa                                                                                           <  2:5689048/101‑1 (MQ=255)


            ccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCAc                                                                                          <  1:5452845/101‑1 (MQ=255)


             tcgccggcgccCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGCCTTCTCCAAGTCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCAcc                                                                                         <  2:4233116/96‑1 (MQ=25)


             cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCAcc                                                                                         <  2:6036584/101‑1 (MQ=255)


             cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCAcc                                                                                         <  1:8682606/101‑1 (MQ=255)


             cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCAcc                                                                                         <  1:8208817/101‑1 (MQ=255)


              ttCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCa                                                                                        <  1:1725626/101‑1 (MQ=255)


              ttCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCa                                                                                        <  2:7389898/101‑1 (MQ=255)


                 gggCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGa                                                                                     <  1:5562521/101‑1 (MQ=255)


                 gggCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGCATTTGCACCAGGa                                                                                     >  2:5392170/1‑101 (MQ=37)


                   gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaaa                                                                                   <  1:1014671/101‑1 (MQ=255)


                   gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaaa                                                                                   <  1:878224/101‑1 (MQ=255)


                    cggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCGGGGGG..G..CCGCCCCCC.CCCCCCCCGCGGATTTGCACCAGGgaaa                                                                                  >  1:3305614/1‑101 (MQ=25)


                    cggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaaaa                                                                                  <  1:4953959/101‑1 (MQ=255)


                    cggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaaaa                                                                                  <  2:3150493/101‑1 (MQ=255)


                     ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaag                                                                                 <  1:4446881/101‑1 (MQ=255)


                     ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaag                                                                                 <  1:6297318/101‑1 (MQ=255)


                     ggcCTTGTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaag                                                                                 <  2:1692471/101‑1 (MQ=37)


                         ttttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaa                                                                             <  1:6150402/101‑1 (MQ=255)


                          tttGCACGGGCGCGAAAGCTTTACGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                                            <  2:1153939/101‑1 (MQ=25)


                             gCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGCCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaagcc                                                                         <  1:6555650/101‑1 (MQ=37)


                                tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTc                                                                      >  1:845082/1‑101 (MQ=255)


                                tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTc                                                                      <  2:2713444/101‑1 (MQ=255)


                                 gggCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcc                                                                     <  1:5669870/101‑1 (MQ=255)


                                   gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTcccc                                                                   <  1:142824/101‑1 (MQ=255)


                                   gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACACGGC..GGGGGCG..CCGCCCCCG.CACCCCCCGCGGATTTGCACCAGGAAAAGCCAAAGACGTcccc                                                                   >  2:3056947/1‑101 (MQ=255)


                                    cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCg                                                                  <  2:4386589/101‑1 (MQ=255)


                                        aaaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAg                                                              <  2:8855634/101‑1 (MQ=255)


                                         aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAgg                                                             <  2:6135305/101‑1 (MQ=255)


                                           gCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAc                                                           <  1:6004959/101‑1 (MQ=255)


                                           gCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAc                                                           >  2:8371575/1‑101 (MQ=255)


                                           gCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAc                                                           <  1:1928588/101‑1 (MQ=255)


                                           gCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAc                                                           <  2:1828776/101‑1 (MQ=255)


                                            cGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAcc                                                          <  2:8591439/101‑1 (MQ=255)


                                             gTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCg                                                         >  2:8083045/1‑101 (MQ=255)


                                             gTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCg                                                         <  2:6723919/101‑1 (MQ=255)


                                               ttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                                                       <  2:2361735/101‑1 (MQ=255)


                                                   ccTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGcc                                                   <  1:2652513/101‑1 (MQ=255)


                                                    cTTGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCt                                                  <  1:8095044/101‑1 (MQ=255)


                                                     ttGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                                 <  1:1629451/101‑1 (MQ=255)


                                                     ttGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                                 <  1:5098507/101‑1 (MQ=255)


                                                     ttGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                                 <  1:6638609/101‑1 (MQ=255)


                                                      tGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                                                <  2:7536193/101‑1 (MQ=255)


                                                      tGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                                                >  2:2035863/1‑101 (MQ=255)


                                                      tGGCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                                                <  1:2219208/101‑1 (MQ=255)


                                                       ggCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAg                                               <  2:8233072/101‑1 (MQ=255)


                                                        gCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                                              <  1:4261982/101‑1 (MQ=255)


                                                        gCTTCGCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                                              <  2:7225370/101‑1 (MQ=255)


                                                             gCCAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc                                         <  2:3517945/101‑1 (MQ=255)


                                                              ccAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg                                        <  1:288303/101‑1 (MQ=255)


                                                              ccAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg                                        <  1:2347061/101‑1 (MQ=255)


                                                               cAAGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGCAGGCCCCCGGACCCCgg                                       >  1:8970201/1‑101 (MQ=25)


                                                                aaGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCCGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCggg                                      >  1:2268028/1‑101 (MQ=37)


                                                                 aGGCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGc                                     >  1:7877703/1‑101 (MQ=255)


                                                                 aGGCGACCCGGC..GGGG..GCCCCCCCCCCG.CACCCCCGGCGGATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGc                                     >  2:4571248/1‑101 (MQ=38)


                                                                  ggCGACCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGcc                                    <  2:2854125/101‑1 (MQ=255)


                                                                      aCCCGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtt                                <  2:3761864/101‑1 (MQ=255)


                                                                       cccGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCttt                               <  2:4950392/101‑1 (MQ=255)


                                                                       cccGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCttt                               <  2:78446/101‑1 (MQ=255)


                                                                        ccGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt                              <  1:6845642/101‑1 (MQ=255)


                                                                        ccGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt                              <  2:4794988/101‑1 (MQ=255)


                                                                        ccGGC..GGGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt                              <  1:3158588/101‑1 (MQ=255)


                                                                         cggc..ggGG..GCTCCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa                             <  2:2464877/101‑1 (MQ=255)


                                                                                cgggggctccgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTGAGGACCCCGGGCCCCTTTTATCt                          <  1:5854826/93‑1 (MQ=255)


                                                                                 gggggctccgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCtt                         <  1:3790965/94‑1 (MQ=255)


                                                                                  ggggctccgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTg                        <  1:7124137/95‑1 (MQ=255)


                                                                                   gggctccgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGc                       <  1:4847080/96‑1 (MQ=255)


                                                                                    ggctccgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGcc                      <  1:2052895/97‑1 (MQ=255)


                                                                                    ggctccgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGcc                      <  1:4104709/97‑1 (MQ=255)


                                                                                       tccgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaa                   <  2:9112068/100‑1 (MQ=255)


                                                                                        ccgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaaa                  <  2:7909598/101‑1 (MQ=255)


                                                                                         cgccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaaaa                 <  2:4129582/101‑1 (MQ=255)


                                                                                          gccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAat                <  1:3676463/101‑1 (MQ=255)


                                                                                          gccCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAat                >  2:2246579/1‑101 (MQ=255)


                                                                                            ccccG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAatat              >  1:4540083/1‑101 (MQ=255)


                                                                                             cccG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATc             <  1:3452004/101‑1 (MQ=255)


                                                                                             cccG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATc             <  1:5304183/101‑1 (MQ=255)


                                                                                               cG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCGGTCCCCGGCAGTAGCGAAGGGCGAAGGACCCCGGGCGCCTGTTGTCGTGCCAaacagtgtcg           >  2:7331744/1‑93 (MQ=19)


                                                                                               cG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATccc           <  2:8958704/101‑1 (MQ=255)


                                                                                               cG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATccc           <  1:7597722/101‑1 (MQ=255)


                                                                                                g.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCGCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCg          >  2:4448216/1‑101 (MQ=255)


                                                                                                g.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCg          <  2:5792684/101‑1 (MQ=255)


                                                                                                  cACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCgg         <  1:6994457/101‑1 (MQ=255)


                                                                                                  cACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCgg         >  2:1002633/1‑101 (MQ=255)


                                                                                                  cACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCgg         >  2:3996207/1‑101 (MQ=255)


                                                                                                    cccccGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCgggg       <  1:3863931/101‑1 (MQ=255)


                                                                                                     ccccGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCggggg      >  2:6534402/1‑101 (MQ=255)


                                                                                                        cGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCGGGGGTcc   <  1:8620812/101‑1 (MQ=255)


                                                                                                        cGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCGGGGGTcc   <  2:3426126/101‑1 (MQ=255)


                                                                                                        cGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCGGGGGTcc   <  1:18216/101‑1 (MQ=255)


ATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGG..G..CCGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAATATCCCGGGGGTCCG  >  NC_014034/2577086‑2577284

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG