BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1253890	93 (0.220)	72 (0.180)	4/178	38.2	0.29	intergenic (+48/+43)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	2590190 =	257 (0.560)	72 (0.180)	4/178	38.2	0.29	intergenic (‑89/‑167)	glnE/RCAP_rcc02415	glutamate‑ammonia‑ligase adenylyltransferase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 316 total aligned reads displayed.


TGCAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTG  >  NC_014034/2590090‑2590289


tGCAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCgg                                                                                                           >  1:1358349/1‑101 (MQ=255)


  cAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCgggg                                                                                                         >  1:667614/1‑101 (MQ=255)


  cAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCgggg                                                                                                         >  2:3958765/1‑101 (MQ=255)


  cAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCgggg                                                                                                         >  2:6701860/1‑101 (MQ=255)


   aaGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCggggg                                                                                                        >  2:548767/1‑101 (MQ=255)


   aaGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCggggg                                                                                                        >  2:6811316/1‑101 (MQ=255)


    aGGCTCATGGCGCCAGACTAGCCCCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCgggggg                                                                                                       <  2:2492183/101‑1 (MQ=255)


     ggCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGCGCGGGGGGc                                                                                                      >  2:9055273/1‑101 (MQ=255)


     ggCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGGCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGGGCGGGGGGc                                                                                                      >  2:1310857/1‑101 (MQ=255)


     ggCTCATGGCCCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGc                                                                                                      <  1:3562934/101‑1 (MQ=255)


      gCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCa                                                                                                     >  1:4457063/1‑101 (MQ=255)


       ctcaggcccccAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCTCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAg                                                                                                    <  2:1801079/92‑1 (MQ=255)


        tCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAg..c                                                                                                 >  2:6115087/1‑101 (MQ=255)


        tCATGCCGCCAGCCAAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAg..c                                                                                                 <  2:4305639/101‑1 (MQ=255)


         cagggCGCCACACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTCCGGGGGGCAg..cg                                                                                                <  1:6535079/98‑1 (MQ=255)


         cATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAg..cg                                                                                                >  2:4060428/1‑101 (MQ=255)


          aTGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAg..cg.c                                                                                              >  2:1729160/1‑101 (MQ=255)


          aTGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAg..cg.c                                                                                              >  2:5682610/1‑101 (MQ=255)


           tGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.cc                                                                                             >  1:4470544/1‑101 (MQ=255)


           tGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.cc                                                                                             >  1:4820110/1‑101 (MQ=255)


            ggCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.ccc                                                                                            >  1:8395211/1‑101 (MQ=255)


            ggCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.ccc                                                                                            <  1:3138742/101‑1 (MQ=255)


              cgcCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.ccccc                                                                                          >  1:6266505/1‑101 (MQ=255)


                  aGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.ccccccgcc                                                                                      >  2:7701116/1‑97 (MQ=255)


                  aGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.ccccccgcc                                                                                      >  2:2740204/1‑97 (MQ=255)


                   gACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.CCCcc.c..cccg                                                                                  >  2:8171806/1‑99 (MQ=255)


                     cTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCggg                                                                                 >  2:8473717/1‑101 (MQ=255)


                      tAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCGG..GGCCCCCC.G..CCgggg                                                                                >  2:3887293/1‑100 (MQ=38)


                      tAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCgggc                                                                                >  1:8310473/1‑100 (MQ=255)


                       aGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTc                                                                               >  2:7514116/1‑101 (MQ=255)


                       aGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTc                                                                               >  2:6426764/1‑101 (MQ=255)


                          cgccgcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGcc                                                                            >  1:7191564/1‑101 (MQ=255)


                              gcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCgg                                                                        >  2:4902762/1‑101 (MQ=255)


                              gcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCgc                                                                        >  2:8687174/1‑100 (MQ=255)


                                aaGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCCgcg                                                                      >  1:8013973/1‑101 (MQ=255)


                                aaGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCCCGgcg                                                                      >  2:5803855/1‑101 (MQ=255)


                                 aGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGgcgc                                                                     >  1:1139485/1‑101 (MQ=255)


                                  gCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGgcttg                                                                    >  1:2292980/1‑98 (MQ=255)


                                       gtgcagggccgcgcAAACCCCCCCCCCCTGTCGTGTGGGTGGTAACACCCG..GGGGGGTGGGGGGGGCCGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCg                                                               <  2:3545454/92‑1 (MQ=255)


                                       gggTCAAGGCGCACAAATGCCCCGCCCCGGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGAGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCg                                                               >  1:6520340/1‑101 (MQ=38)


                                       gagTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGGCGCCTCGGCGCAAGCCg                                                               >  2:5045244/3‑101 (MQ=255)


                                        ggTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGa                                                              >  1:4719954/1‑101 (MQ=255)


                                         gTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAg                                                             >  1:1676723/1‑101 (MQ=255)


                                         gTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAg                                                             >  1:5033124/1‑101 (MQ=255)


                                          tCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAgg                                                            >  2:4554022/1‑101 (MQ=255)


                                          tCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAgg                                                            >  1:5978192/1‑101 (MQ=255)


                                           cAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGc                                                           >  2:4157174/1‑101 (MQ=255)


                                           cAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGGCGCCTCGGCGCAAGCCGCggg                                                           >  2:5596353/1‑100 (MQ=38)


                                            aaGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCg                                                          >  2:4612483/1‑101 (MQ=255)


                                             aGGCACGCACACGCCCCGCCCCTTGCATCTTGGGCCGAATTTCCC..GGGGGGGGCGGGGGGCCGCCCC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCg                                                          <  2:1112636/101‑1 (MQ=19)


                                              ggCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGaa                                                        >  2:1941703/1‑101 (MQ=255)


                                                    cAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctct                                                  >  2:6320970/1‑101 (MQ=255)


                                                    cAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGGCGCCTCGGCGCAAGCCGAGGCGAAAgctct                                                  >  2:5334604/1‑101 (MQ=38)


                                                     aaaTGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctctc                                                 >  2:296735/1‑101 (MQ=255)


                                                       ccccccccccccTGTCCCTTGGGGGCGAA.ATCCCGGGGGGGGGGGGGGGGGCCGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTcc                                                <  2:4665892/98‑1 (MQ=9)


                                                           cccgccccTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGCAATCTCTCCCCGAc                                           >  2:3329469/1‑101 (MQ=255)


                                                              gccccTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGAcccc                                        >  1:5336377/1‑101 (MQ=255)


                                                                 ccTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTg                                     >  2:7175673/1‑101 (MQ=255)


                                                                   tGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcg                                   >  1:4590300/1‑101 (MQ=255)


                                                                    gTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcgg                                  >  1:2113359/1‑101 (MQ=255)


                                                                     tCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggc                                 >  1:4901786/1‑101 (MQ=255)


                                                                     tCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggc                                 >  2:1599081/1‑101 (MQ=255)


                                                                      cttttgggCGCAAATCCCCG..GGGGGGGGGGGGGGGCAGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg                                <  2:6629659/95‑1 (MQ=21)


                                                                      cATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgtggcg                                >  1:9140438/1‑101 (MQ=255)


                                                                      cATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg                                >  2:2081862/1‑101 (MQ=255)


                                                                      cATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg                                >  2:7236334/1‑101 (MQ=255)


                                                                      cATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg                                >  1:1199249/1‑101 (MQ=255)


                                                                          ttGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAAt                            >  1:404151/1‑101 (MQ=255)


                                                                          ttGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAAt                            >  2:9104203/1‑101 (MQ=255)


                                                                            ggCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGt                          >  1:3336015/1‑101 (MQ=255)


                                                                             gggggatggtCCG..GGGGGGGGGCGGGGGCAC..CC.CCCCC.GGCCCGGGTCGCCACGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGt                          <  1:5793140/92‑1 (MQ=19)


                                                                             gggcgAGTATACCG.GGGGGGGGCGGGGGGCCGCCCC.CCCCC.C..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATg                           <  2:2650221/99‑1 (MQ=21)


                                                                               gcgAATATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaa                       >  1:3370824/1‑101 (MQ=255)


                                                                                  gaagaccccgggggggGGGGGGGGGCGC..CC.CCCCCGG..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaaa                      <  2:8780706/91‑1 (MQ=25)


                                                                                  aaTATCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAAt                    >  2:7797166/1‑101 (MQ=255)


                                                                                   atatCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATc                   >  1:3664511/1‑101 (MQ=255)


                                                                                   atatCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATc                   >  2:7352465/1‑101 (MQ=255)


                                                                                    tatCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCt                  >  1:696435/1‑101 (MQ=255)


                                                                                    tatCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCt                  >  1:918237/1‑101 (MQ=255)


                                                                                     atCCC..GGGGGGTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                 >  1:7499097/1‑101 (MQ=255)


                                                                                       acccgggggggGGGGGGGGGCGC..CCCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                 <  2:3696979/96‑1 (MQ=25)


                                                                                        cgcgggggggGGCGGGGGGCCGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCttt                <  2:2863103/97‑1 (MQ=37)


                                                                                        cc..GGGGGGGGGGGGGGGCCGCCCC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc               <  2:6973216/101‑1 (MQ=37)


                                                                                          ggggggggGGGGGGGGCCCC..CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac             <  1:3855317/99‑1 (MQ=37)


                                                                                           gggggggGGGGGGGGGCGC..CC.CCCCCGG..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac             <  1:2657432/100‑1 (MQ=37)


                                                                                            ggggggTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca            >  1:1876050/1‑101 (MQ=255)


                                                                                            ggggggTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCCTGCGCGGCAACGTAAAAATCTTTccta            >  2:5891160/1‑98 (MQ=25)


                                                                                            ggggggGGGGGGGGGCGC..CCCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGTAATGTAAAAATCTTTcaca            <  1:5512540/101‑1 (MQ=25)


                                                                                             gggggTGGGGGGGCCCC..CC.CCCCCGG..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACAt           <  2:8335311/101‑1 (MQ=37)


                                                                                             gggggGGGGGGGGCCCG..CC.CCCCC.GC.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACAt           <  2:8020783/101‑1 (MQ=37)


                                                                                             gggggGGGGGGGGCCCC..CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATc          <  1:862591/101‑1 (MQ=37)


                                                                                             gggggGGGGGGGGCCCC..CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATc          <  2:445736/101‑1 (MQ=37)


                                                                                                 gTGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCATTGTAAAAATCTTTCACATcccc       >  2:3813538/1‑101 (MQ=255)


                                                                                                  tGCGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCct      >  2:8084529/1‑101 (MQ=255)


                                                                                                  gggggggggCCC..CC.CCCCC.GC.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCct      <  1:7422333/98‑1 (MQ=38)


                                                                                                    gggggggCGG..CCCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct    <  1:4378896/100‑1 (MQ=38)


                                                                                                    gggggggCCG..CCCCCCCC.C..CCGGGTCCCCCCGGGGGAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct    <  1:6768976/100‑1 (MQ=255)


                                                                                                    cGGGGGGCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct    >  2:7028936/1‑101 (MQ=255)


                                                                                                      gggggCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTg  >  2:1504107/1‑101 (MQ=255)


                                                                                                      gggggCAG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTg  >  2:6523669/1‑101 (MQ=255)


TGCAAGGCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCC..GGGGGGTGCGGGGGGCAG..CG.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTG  >  NC_014034/2590090‑2590289

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG