BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1253892	79 (0.180)	86 (0.200)	2/192	41.7	0.33	intergenic (+50/+41)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	2590196 =	272 (0.590)	86 (0.200)	2/192	41.7	0.33	intergenic (‑95/‑161)	glnE/RCAP_rcc02415	glutamate‑ammonia‑ligase adenylyltransferase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 296 total aligned reads displayed.


GCTCATGGCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTGACCCG  >  NC_014034/2590096‑2590294


 ctcaggcccccAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCTCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.Ag                                                                                                         <  2:1801079/92‑1 (MQ=255)


 cTCATGGCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.Ag                                                                                                         >  1:4072151/1‑101 (MQ=255)


 cTCAGGGCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.Ag                                                                                                         <  2:812772/101‑1 (MQ=255)


   cATGGCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.Ag..cg                                                                                                     >  2:4060428/1‑101 (MQ=255)


   cATGGCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.Ag..cg                                                                                                     >  2:2657350/1‑101 (MQ=255)


    aTGGCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.Ag..cg.c                                                                                                   >  2:1729160/1‑101 (MQ=255)


    aTGGCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.Ag..cg.c                                                                                                   >  2:5682610/1‑101 (MQ=255)


      ggCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.ccc                                                                                                 >  1:8395211/1‑101 (MQ=255)


      ggCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.ccc                                                                                                 <  1:3138742/101‑1 (MQ=255)


        cgcCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.ccccc                                                                                               >  1:6266505/1‑101 (MQ=255)


         gcCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.cccccc                                                                                              >  1:3336921/1‑100 (MQ=255)


         ccaagccTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.cccccc                                                                                              <  1:1198182/95‑2 (MQ=255)


             gACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.ccccccgccg                                                                                          >  2:3693865/1‑96 (MQ=255)


             gACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.ccccccgccg                                                                                          >  2:6689802/1‑96 (MQ=255)


                tAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCgggc                                                                                     >  1:8310473/1‑100 (MQ=255)


                     gccgcAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCt                                                                                >  2:7445469/1‑101 (MQ=255)


                       cgcAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCg                                                                              >  2:7981261/1‑101 (MQ=255)


                       ccgaaccccc.GGGTCAAGGGCGCCCAACCCCCCCCCCCCTGT.CCTCTTGGCGCGAATACCCGGGGGGGGGGGGGGGGCC.CC..CC.CCCCC.G..CCGGGTCGCCTc                                                                               <  2:1373317/95‑1 (MQ=255)


                       cccAAGCCCCGGGGTCAG.GGCGCCCAACGCCCCCCCCCCTGT.CTTTTGGGGGCGAATCCCCGGGGGGGGGGGGGGGG.C.AGC.CC.CCCCC.G..CCGGGTCGCCTc                                                                               <  2:6805572/99‑1 (MQ=255)


                         cAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGgc                                                                            >  2:5445080/1‑101 (MQ=255)


                         cAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGgc                                                                            >  2:8347909/1‑101 (MQ=255)


                          aaGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGgcg                                                                           >  1:3572719/1‑101 (MQ=255)


                          aaGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCCgcg                                                                           >  1:8013973/1‑101 (MQ=255)


                          aaGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCCCGgcg                                                                           >  2:5803855/1‑101 (MQ=255)


                           aGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGgcgc                                                                          >  1:6596420/1‑101 (MQ=255)


                           aGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGgcgc                                                                          >  1:1139485/1‑101 (MQ=255)


                                c.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAgac                                                                     >  2:7737631/1‑99 (MQ=255)


                                c.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGcc                                                                     >  2:6151082/1‑101 (MQ=255)


                                  gggTCAA.GGCGCACAAATGCCCCGCCCCGGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGAG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCg                                                                    >  1:6520340/1‑101 (MQ=38)


                                   gtgcagggccgcgcAAACCCCCCCCCCCTGT.CGTGTGGGTGGTAACACCCGGGGGGGTGGGGGGGG.C.CGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCg                                                                    <  2:3545454/92‑1 (MQ=255)


                                   ggTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGa                                                                   >  2:2299883/1‑101 (MQ=255)


                                    gTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAg                                                                  >  1:5033124/1‑101 (MQ=255)


                                    gTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAg                                                                  >  1:1676723/1‑101 (MQ=255)


                                     tCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAgg                                                                 >  1:5978192/1‑101 (MQ=255)


                                      cAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGc                                                                >  1:7116317/1‑101 (MQ=255)


                                      cAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGc                                                                >  2:4157174/1‑101 (MQ=255)


                                      cAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAACCCGAGGc                                                                >  1:6886238/1‑101 (MQ=255)


                                      cAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGGCGCCTCGGCGCAAGCCGCggg                                                                >  2:5596353/1‑100 (MQ=38)


                                       aa.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCg                                                               >  2:4495427/1‑101 (MQ=255)


                                        a.GGCACGCACACGCCCCGCCCCTTG.CATCTTGGGCCGAATTTCCCGGGGGGGGCGGGGGG.C.CGCCCC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCg                                                               <  2:1112636/101‑1 (MQ=19)


                                          ggCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGaa                                                             >  2:8765330/1‑101 (MQ=255)


                                             gccgaaacccccccccccTGTCCGTCTGGGCGCGAATCCCGGGGGGGGGGGGGGGGG.C.GGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAt                                                           <  2:2632656/92‑1 (MQ=12)


                                               gcAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctc                                                        >  1:445744/1‑101 (MQ=255)


                                               gcAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctc                                                        >  2:8078407/1‑101 (MQ=255)


                                               gcAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctc                                                        >  1:2461721/1‑101 (MQ=255)


                                               gcAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGAGGAAGCCGAGGCGACAtctc                                                        >  2:3781118/1‑101 (MQ=37)


                                                cAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctct                                                       >  1:3667797/1‑101 (MQ=255)


                                                cAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGCGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAgctct                                                       >  2:5043734/1‑101 (MQ=37)


                                                cAAACGCCCCGCCCCGTC.CATGTGGGCGCGAATCTCCCGGGGGGTGCGGGGGG.C.AGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctct                                                       <  2:4262001/101‑1 (MQ=25)


                                                 aaaTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCCAGCCGAGGCGAAAtctctc                                                      >  1:7388486/1‑101 (MQ=255)


                                                 aaaTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctctc                                                      >  2:1614950/1‑101 (MQ=255)


                                                 aaaTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctctc                                                      >  1:4868907/1‑101 (MQ=255)


                                                   atccccccccccTGT.CTTTGTGGCGCGAAGCCCGGGGGGGGTGCGGGGGG.C.GGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTccc                                                    <  1:5682817/98‑1 (MQ=16)


                                                   aTGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGGGCAAGCCGCGGCGCAATCTCTccc                                                    >  2:9061642/1‑101 (MQ=25)


                                                       cccgccccTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGCAATCTCTCCCCGAc                                                >  2:3329469/1‑101 (MQ=255)


                                                        ccgccccTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGAcc                                               >  1:1329273/1‑101 (MQ=255)


                                                          gccccTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGAcccc                                             >  1:5336377/1‑101 (MQ=255)


                                                            cccTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCtt                                           >  1:4781477/1‑101 (MQ=255)


                                                            cccTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCtt                                           >  2:5877105/1‑101 (MQ=255)


                                                             ccTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTg                                          >  2:7175673/1‑101 (MQ=255)


                                                               tGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcg                                        >  2:5155344/1‑101 (MQ=255)


                                                                gT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcgg                                       >  2:3885808/1‑101 (MQ=255)


                                                                gT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcgg                                       >  1:4417402/1‑101 (MQ=255)


                                                                   cttttgggCGCAAATCCCCGGGGGGGGGGGGGGGG.CGCC..CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg                                     <  2:1557956/95‑1 (MQ=16)


                                                                   cATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgtggcg                                     >  1:9140438/1‑101 (MQ=255)


                                                                   cATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg                                     >  2:2081862/1‑101 (MQ=255)


                                                                   cATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg                                     >  2:7236334/1‑101 (MQ=255)


                                                                    aTCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGgcgc                                    >  2:4589826/1‑101 (MQ=255)


                                                                     tCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCa                                   >  2:7689979/1‑101 (MQ=255)


                                                                      cTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCaa                                  >  2:923425/1‑101 (MQ=255)


                                                                        tGGCGCGAATCTCCGGGGGGGGGGGGGGGC.C.GG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATg                                <  2:8310110/101‑1 (MQ=25)


                                                                          gggggatggtCCGGGGGGGGGGCGGGGG.C.AC..CC.CCCCC.GGCCCGGGTCGCCACGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGt                               <  1:5793140/92‑1 (MQ=19)


                                                                            gcgAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaa                            >  2:6364455/1‑101 (MQ=255)


                                                                             caaacggcgggggggaGGCGGAGGG.C.CC..CGCCCCCC.C..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaaa                           <  2:279964/91‑1 (MQ=21)


                                                                              gAATATCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTaaaaa                          >  1:1874012/1‑101 (MQ=255)


                                                                                atatCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATc                        >  2:4633213/1‑101 (MQ=255)


                                                                                atatCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATc                        >  2:7352465/1‑101 (MQ=255)


                                                                                 tatCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCt                       >  1:918237/1‑101 (MQ=255)


                                                                                  atCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                      >  1:7499097/1‑101 (MQ=255)


                                                                                  atCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                      >  1:4501996/1‑101 (MQ=255)


                                                                                  atCCCGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.C..CCGGGGCGCCTCCGCCCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAAGGTAAAAATCtt                      >  2:2955027/1‑101 (MQ=37)


                                                                                   ccggggggggGGGGGGGGG.C.CC..CC.CCCCCAG..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCttt                     <  1:3386633/97‑1 (MQ=25)


                                                                                    cccGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCGCGACCCCTTGCGGCGCAATGTAAAAATCTTTc                    >  1:4669667/1‑101 (MQ=255)


                                                                                    cccGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc                    >  1:6742847/1‑101 (MQ=255)


                                                                                    cccGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc                    >  2:3104997/1‑101 (MQ=255)


                                                                                    cccGGGGGGTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc                    >  1:2134825/1‑101 (MQ=255)


                                                                                     ggggggggGGGGGGGCG.C.CG..CC.CCCCCGG..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTca                   <  2:3899759/99‑1 (MQ=37)


                                                                                     cgggggggGGCGGGGGG.C.CGC.CC.CCCCC.GC.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc                    <  2:6581973/99‑1 (MQ=37)


                                                                                     ccGGGGGGGGGGGGGGG.C.CGCCCC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc                    <  2:6973216/101‑1 (MQ=37)


                                                                                      gggggggGGGGGGGGG.C.GC..CC.CCCCCGG..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac                  <  1:2657432/100‑1 (MQ=37)


                                                                                       ggggggGGGGGGGGG.C.GGC.CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcaca                 <  2:4819961/101‑1 (MQ=37)


                                                                                        gggggGGGGGGGGC.C.CC..CC.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATc               <  1:862591/101‑1 (MQ=37)


                                                                                            gTGCGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATcccc            >  2:58973/1‑101 (MQ=255)


                                                                                               ggggggg.C.CG..CCCCCCCC.C..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct         <  1:3887408/100‑1 (MQ=38)


                                                                                               cGGGGGG.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct         >  2:7028936/1‑101 (MQ=255)


                                                                                               cGGGGGG.C.AG..CGCCCCCC.G..CCGGGGCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct         >  2:4378770/1‑101 (MQ=255)


                                                                                                gggggg.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCtt        >  2:6506806/1‑101 (MQ=255)


                                                                                                 ggggg.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTg       >  2:8517254/1‑101 (MQ=255)


                                                                                                   ggg.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTgac     >  1:5486638/1‑101 (MQ=255)


                                                                                                    gg.C.AG..CGCCCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTgacc    >  1:1984571/1‑101 (MQ=255)


GCTCATGGCGCCAGACTAGCCGCCGCAAGCCCC.GGGTCAA.GGCGCGCAAATGCCCCGCCCCTGT.CATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGG.C.AG..CG.CCCCC.G..CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTGACCCG  >  NC_014034/2590096‑2590294

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG