BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1253895 =	135 (0.300)	47 (0.100)	5/198	39.0	0.26	intergenic (+53/+38)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	1721522 =	134 (0.290)	47 (0.100)	5/198	39.0	0.26	intergenic (‑417/+29)	RCAP_rcc01588/RCAP_rcc01589	GSCFA family protein/ErfK/YbiS/YcfS/YnhG family protein
Rejected: Position hash score below cutoff.

Only 100 of 175 total aligned reads displayed.


GGTTCCAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAACAGTCC  >  NC_014034/1721422‑1721622


ggTTCCAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...g..g.g                                                                                                           >  2:1507967/1‑101 (MQ=255)


  ttCCAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...g..g.ggg                                                                                                         >  2:5044387/1‑99 (MQ=255)


  ttCCAAATAACGCGATGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...c..g.ggg                                                                                                         >  2:4240869/1‑99 (MQ=255)


    ccAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...g..g.ggggg                                                                                                       >  1:4439196/1‑97 (MQ=255)


     cAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...c..g.gggcgg                                                                                                      >  1:3932796/1‑96 (MQ=255)


      aaaTAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...g..g.ggggcgg                                                                                                     >  1:4106020/1‑95 (MQ=255)


         tAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...g..g.gggctgcgcc                                                                                                  >  2:5525671/1‑92 (MQ=255)


         tAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...c..g.ggggtgcgcc                                                                                                  >  1:823765/1‑92 (MQ=38)


         tAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...c..g.ggggcgggcc                                                                                                  >  1:4519315/1‑92 (MQ=38)


          aaCGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...g..g.ggggggcgcgc                                                                                                 >  1:2349814/1‑91 (MQ=255)


          aaCGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...g..g.ggggctcgccc                                                                                                 >  2:442566/1‑91 (MQ=255)


          aaCGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...G..G.GGG.GC.Gc..cccc                                                                                             >  1:5901312/1‑101 (MQ=255)


              cgcTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCgg                                                                                           >  2:9175155/1‑101 (MQ=255)


               gcggCGGCCCCCCCCCCCGCGGCGTTTTTTTTTTGGCCGGCCGCTTGGGGGTTTC.CGCCCCGGCGG.CGCCGGGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGa                                                                                          <  1:6528391/98‑1 (MQ=255)


                 gcgcgcccccccccccGCTGCTTTTTTTTTTGGGCCGGTCGCCTGGGGGTTTC.CCCCTCGGCGC.CGCGGGGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGAcc                                                                                        <  2:8734990/92‑1 (MQ=255)


                     gcccccccccccGCTGCGTTTTTTTTTGGGCCGGTCGCCTGGGGGTTTC.CCCCCCGGCGG.CGCCGGGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGAcccccc                                                                                    <  1:8392810/96‑1 (MQ=255)


                       cccccctcccGCTGCTTTTTTTTTTTGGCCGGTCGCTTGGGGGTTTC.CGCCCGGGCTG.CGCGGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGAcccccccc                                                                                  <  2:7871729/98‑1 (MQ=9)


                       ccccccccccGCGGTGTTTTTTTTTGGCCCGGCCGCTTGGGGGTTTC.CGCCGCGGCGG.CCCGGGGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGAcccccccc                                                                                  <  1:5852776/98‑1 (MQ=2)


                         tccctcccGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGGGG..G.GGG.GC.GC..CCCCGGCccccccccc                                                                                 >  2:295850/1‑100 (MQ=25)


                         tccctcccGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGGcccccccccc                                                                                >  2:3435945/1‑99 (MQ=21)


                         tccctcccGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...GGCG.GCC.GC.GC..CCCCCGACCCCCCCCGa                                                                                >  2:7469309/1‑101 (MQ=25)


                              cccGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCCGAccccccccccacaac                                                                           >  1:4921223/1‑94 (MQ=21)


                               ccGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGCAGAtcc                                                                          >  2:9147469/1‑100 (MQ=21)


                               ccGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGCAAAtcc                                                                          >  2:5345040/1‑100 (MQ=21)


                                cgcgtgtttttTTTTTGGGCCGGTCGCCGTGGGGTTTC.CGCCGCGGCTG.CGCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGAtctc                                                                         <  2:4702771/93‑1 (MQ=12)


                                cGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGT.GC.GC..CCCCCGGcccccccccccgctctc                                                                         >  1:6794042/1‑92 (MQ=18)


                                cGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCTGGG.GC..CCCCGGCCCCCCCCCgcgatctc                                                                          >  2:2189499/1‑94 (MQ=18)


                                 gCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCCGACCCCCCCCCAAGATCTCa                                                                        >  2:5792792/1‑101 (MQ=21)


                                 cgcggcttttTTTTTTGGGCGGCCCGCTTGGGGGTTTCCCCCCCGGCGC.CGCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGAtctc                                                                         <  1:8665203/94‑1 (MQ=9)


                                 ccctgtttttTTTTTTGGCCGGGCCGCTGGGGGATTTCCCCCTGGGCGG.CCCCGGGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGAtctc                                                                         <  2:7683553/94‑1 (MQ=9)


                                  gcggcttttTTTTTTGGGCCGCCCGCTTGGGGTTTTCCGCCCGGGCCG.CGCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCa                                                                        <  1:271277/95‑1 (MQ=255)


                                  cAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGGCCCCCCCCCCAGAcctccc                                                                       >  1:7067379/1‑99 (MQ=18)


                                   aGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATTTCaca                                                                      >  2:634599/1‑99 (MQ=21)


                                    tcgttttTTTTTGGGCGGGTCCCTTTGGGGTTTC.CCCCTCGGCCG.CCCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAt                                                                     <  1:4079093/97‑1 (MQ=255)


                                    cgtcTTTTTTTTGGCCCGGTCGCCTGGGGTGTCT.CCCCGGGGCGG.CGCCGGGCCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAt                                                                     <  1:5347687/98‑1 (MQ=255)


                                     ctttttTTTTTGGGCGGGTCGCTTTGGGGTTTT.CGCCCCGGCGG.CGCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.c                                                                   <  1:4579678/98‑1 (MQ=255)


                                     ctttttTTTTTCGGCCGGCCGCGTGGGGTATCC.CCCCGCGGCCG.CCCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.c                                                                   <  1:8056376/98‑1 (MQ=255)


                                      tttttTTTTTGGGCCGGTCGCGTGGGTTTTTC.CGCCTCGGCCG.CCCCGGGCCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.Ca                                                                  <  1:1508014/99‑1 (MQ=12)


                                      gcTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCCAAGACCTCAGaccc                                                                   >  2:2926056/1‑98 (MQ=18)


                                       tttttgtgtgggCCGGTCGCCTTGGGGTTCC.CCCCCGGGCGG.CCCCGGGCCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CAc                                                                 <  2:7245190/91‑1 (MQ=255)


                                       cTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...G..G.GGG.GC.GCGGCCCCCGACCCCCCCCCCAGAACTCaaaatcc                                                                  >  1:2354631/1‑95 (MQ=18)


                                        tttATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGC.GC.GC..CCCCCGGCCCCCCCCCCAGATCTCCGAT.CAcc                                                                >  1:748083/1‑101 (MQ=18)


                                         ttttttttGGCCGGGCGCGTGGGGGTTCC.CGCCCCGGCGG.CGCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCt                                                               <  1:9175577/98‑1 (MQ=12)


                                         ttATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GAC.GC.GC..CCCCCGGCCCCCCCCGCAGATCTCAggacccct                                                                >  2:7162136/1‑94 (MQ=18)


                                          tttttggggCGGGCCGCC.TGGGGGTTT.CCCCCCGGCCGCCGCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCtt                                                              <  1:5105882/94‑1 (MQ=255)


                                          tatgtgcggCCGCTCTCCTTGGGTCTTT.CCCCGCGGGGG.CGCGGAGTCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCtt                                                              <  2:5127588/94‑1 (MQ=255)


                                           aTTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGT.GC.GC..CCCCGGACCCCCCCCGCAGGTCTCAGAT.CCCCCTg                                                             >  1:1100973/1‑101 (MQ=18)


                                           aTTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCCAAGAGCTCCTAT.CACCCTg                                                             >  2:5993054/1‑101 (MQ=18)


                                           aTTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCCGGCCCCCCCCCCAGATCTCAGAT.CACCCTg                                                             >  1:4140106/1‑101 (MQ=18)


                                            tttttGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGT.GCGGC..CCCCGGACCCCCCCC.AAGATCCCCGAT.ccacctga                                                            >  2:474257/1‑94 (MQ=17)


                                            tttttGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGCAGATCTCAGAT.CACCTTGa                                                            >  1:7466615/1‑101 (MQ=21)


                                              tttGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCGCCC...G..GCGCT.GC.GC..CCCCCGGCCCCCCCCCAAAATCCCCGCT.CACCCGGAcc                                                          >  1:2967892/1‑101 (MQ=12)


                                              tttGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGagc                                                          >  2:7520404/1‑99 (MQ=21)


                                              tttGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCCAAGGTCCCAAAA.CACCCTGaac                                                          >  2:3478905/1‑99 (MQ=17)


                                              tggggCGGGCCGCGTGGGGGTTTC.CCCCGCGGCCG.CGCGGGGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGAcc                                                          <  1:5288382/98‑1 (MQ=255)


                                               ttGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGGCCCCCCCCCAAGCTCCCACAT.TACCTTCAccc                                                         >  1:5261043/1‑100 (MQ=17)


                                               ggggCGGGTCG.CTTGGGGTTTTCCCCCGCGGCGC.CGCCGGGCCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCt                                                         <  1:3250299/99‑1 (MQ=12)


                                                 ggCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GG.GC..CCCCCGACCCCCCCCGCAGATCTCAGAT.CACCCTTACCTGc                                                       >  2:3948100/1‑101 (MQ=18)


                                                   ccGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCCCAGATCTCAGATCCACCttacccgcgg                                                      >  1:4897249/1‑93 (MQ=17)


                                                    cGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGCAGATCTCACAT.CCCCTTGACCTGCGTg                                                    >  2:1267344/1‑101 (MQ=18)


                                                     cgggcccTTGGGGGTTT.CCCCCCCGCCGCCCCCGCGCCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTg                                                    <  1:4465593/96‑1 (MQ=255)


                                                      gTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCCAAGATCTCAGAT.CACCCTGACCTGCGTGcc                                                  >  2:5829014/1‑101 (MQ=21)


                                                       ccGCCGTGGGGCTTC.CGCCGCGGCGG.CGCCGGGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCg                                                 <  1:6678657/100‑1 (MQ=255)


                                                          gtttGGGGTTTTCCCCCGCGGCGG.CGCGGAGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGAc                                               <  2:69038/99‑1 (MQ=255)


                                                          gcTTGGGGTCTTCCGCCGCGGCGG.CGCCGGGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGAc                                               <  2:8548153/100‑1 (MQ=255)


                                                            ttGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGT.GG.GC..CCCCCGCCCCCCCCCCCAGAACTCAAAA.CACCCTGCCCCCCGGGCCGGcccg                                            >  1:6700937/1‑99 (MQ=2)


                                                            ttGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGT.GC.GC..CCCCGGGCCCCCCCCCGAGAACCCAGAG.CACCCTTACCCGCggggcgccccg                                            >  2:4617134/1‑91 (MQ=2)


                                                             tGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCCAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCggg                                           >  2:7468177/1‑101 (MQ=21)


                                                             tGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCCGGCCCCCCCCCCAGAACTCCGAT.CACCCTTACCCGCGGGCCGCccccg                                           >  1:3948785/1‑98 (MQ=9)


                                                                ggATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGC.GC.GC..CCCCGGACCCCCCCCGCAAATCTCAGAA.CACCTTGACCTGCGTGCCGCCCGGGGag                                        >  1:8528816/1‑101 (MQ=18)


                                                                 gATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGCAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGccgg                                       >  1:7082934/1‑98 (MQ=21)


                                                                   ttcccgcccgggCCG.CGCCGAGCCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCagag                                      <  1:7560898/91‑1 (MQ=255)


                                                                   ttccccccggggCCG.CGCCGGCGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCagag                                      <  2:8334783/91‑1 (MQ=255)


                                                                        tccccgcccg.cgcCGGGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGGCCCCCCGCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGAt                                 <  1:3584578/92‑1 (MQ=255)


                                                                         ccTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCCGACCCCCCCCCCAGATCTCCGAA.CCCCCTTACCCGCCTGCCCGCCCGGCAGAGCgggga                                >  1:7139857/1‑98 (MQ=2)


                                                                          cTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGT.GC.GC..CCCCGGGCCCCCCCCCAAGATCTCCGAT.CCCCTTGACCTGCGTGCCCACCGGGCCGAGCGGGTaa                               >  2:2647626/1‑101 (MQ=18)


                                                                          cTCGGCTG.CGCCGAGGCGACCCG.CCGG.G..G.GGT.GC.GC..CCCCCGGCCCCCCCCCCAGAGCTCCGAT.CACCCTCACCCGCCGGCCGCCCGGGCcgaggcgggaa                               >  2:2333339/1‑94 (MQ=2)


                                                                            cGGCCG.CCCGGAGGCCCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAg                             <  2:5176714/101‑1 (MQ=255)


                                                                                   cgcCGCCGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTc                       <  1:5793027/101‑1 (MQ=255)


                                                                                   cgcCGACGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTc                       <  2:6061124/101‑1 (MQ=255)


                                                                                   cccggAGGCGCCCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTc                       <  2:1335880/97‑1 (MQ=255)


                                                                                      cGAGGCGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGGTAAAGTTCCTCGAc                    >  2:3840941/1‑101 (MQ=38)


                                                                                           cGACCCG.CCGG.G..G.GCT.GC.GC..CCCCGGACCCCCCCCCAAGATCTCAGAT.CACCTTGACCTGGGTGCCGGCCGGGCAGAGGGGGTAAAGTTTCTCGACCTcgg               >  2:8756626/1‑101 (MQ=25)


                                                                                              cccccgccggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGc              <  2:3959/91‑1 (MQ=255)


                                                                                               acccgctggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCa             >  1:5045405/10‑101 (MQ=255)


                                                                                                  cgccggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTg          <  1:3436049/95‑1 (MQ=255)


                                                                                                  cgccggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTg          <  2:2901013/95‑1 (MQ=255)


                                                                                                  cgccggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTg          <  2:611697/95‑1 (MQ=255)


                                                                                                  cgccggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTg          <  1:1166982/95‑1 (MQ=255)


                                                                                                   gccggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCTGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGa         <  2:8637502/96‑1 (MQ=255)


                                                                                                   gccggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGa         <  2:7067094/96‑1 (MQ=255)


                                                                                                   gccggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGa         <  2:6783081/96‑1 (MQ=255)


                                                                                                     cggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAAc       <  2:6521868/98‑1 (MQ=255)


                                                                                                     cggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAAc       <  1:6653602/98‑1 (MQ=255)


                                                                                                      ggg..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAACa      <  2:320088/99‑1 (MQ=255)


                                                                                                        g..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAACAGt    >  2:2867486/1‑101 (MQ=255)


                                                                                                        g..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAACAGt    >  2:1817479/1‑101 (MQ=255)


                                                                                                        g..g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAACAGt    <  2:3623914/101‑1 (MQ=255)


                                                                                                           g.gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAACAGTc   <  1:2333406/101‑1 (MQ=255)


                                                                                                             gCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAACAGTcc  <  1:7678343/101‑1 (MQ=255)


GGTTCCAAATAACGCGCTGCGGGCCTCCCTCCCGCAGCGCTTTATTTTTGGCCGGTCGCCTTGGGGATTT.CGCCTCGGCTG.CGCCGAGGCGACCCG.CC...G..G.GCT.GC.GC..CCCCGGACCCCCCCCGAAGATCTCAGAT.CACCTTGACCTGCGTGCCGACCGGGCAGAGCGGATAAAGTTCCTCGACCTGGGCATTGAACAGTCC  >  NC_014034/1721422‑1721622

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG