BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1253895 =	135 (0.300)	38 (0.080)	4/198	40.0	0.13	intergenic (+53/+38)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	2577165 =	382 (0.830)	38 (0.080)	4/198	40.0	0.13	intergenic (+87/‑342)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 388 total aligned reads displayed.


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGG..C..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258


aaaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..ggg                                                                                                    >  1:9146557/1‑101 (MQ=255)


aaaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GCC..ggg                                                                                                    >  2:2132119/1‑101 (MQ=255)


 aaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..gggg                                                                                                   <  2:1206369/101‑1 (MQ=255)


  aaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..gcggg                                                                                                  >  2:2652431/1‑101 (MQ=255)


   aGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGg..c                                                                                               <  1:1374308/101‑1 (MQ=255)


     cAGATCTGACATCGCGATGAAACTGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGg..ctc                                                                                             <  2:1724698/101‑3 (MQ=255)


     cAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGg..ctc                                                                                             <  1:4268960/101‑3 (MQ=255)


      aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..ggggggtcc                                                                                              >  1:8420863/1‑97 (MQ=255)


       gATGTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGGC..ggggggggg                                                                                              >  1:7225674/1‑97 (MQ=255)


       gATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..cgggggggcg                                                                                             >  1:2361802/1‑96 (MQ=255)


       gATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGg..ctccg                                                                                           <  2:2552536/101‑5 (MQ=255)


        aTCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGAg..ctccgc                                                                                          >  2:7811199/1‑96 (MQ=255)


         tCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGG..G..GGcccc                                                                                       >  1:7977691/1‑101 (MQ=255)


          cTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..gggggggcccccc                                                                                          >  1:7029104/1‑93 (MQ=255)


           tGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGG..GGGGg..cgggcggcc                                                                                       >  2:4104590/1‑93 (MQ=255)


           tGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..ggggggggggcccc                                                                                         >  1:5996464/1‑92 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGg..ctccgccccc                                                                                      <  1:6354419/101‑10 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCCTCGCCAAGGCGACCC.GGC..GGGGg..ctccgccccc                                                                                      <  1:6469907/101‑10 (MQ=38)


                tCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CAc                                                                                 <  2:4546721/101‑1 (MQ=255)


                 cgcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGCGGGGGGG..C..CGcccccccccc                                                                                 >  1:545221/1‑96 (MQ=38)


                 cgcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGGCC..CGCCCCCG.CCcc                                                                                >  1:962243/1‑101 (MQ=39)


                 cgcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CAcc                                                                                <  2:5554571/101‑1 (MQ=255)


                  gcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CAccc                                                                               <  1:8329656/101‑1 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CAccccc                                                                             <  2:2056705/101‑1 (MQ=255)


                    ctcttccgatccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CAccccc                                                                             <  1:8968607/91‑1 (MQ=25)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCg                                                                            <  2:1665949/101‑1 (MQ=255)


                      tGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCgg                                                                           <  2:538785/101‑1 (MQ=255)


                      tGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGG..G..CGGGCCCC.CCccccccccc                                                                         >  2:6017622/1‑97 (MQ=38)


                      tGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGGTTCGCCTTGGCTTCGCCAAGGCGACCC.GGG..GGGGG..CTTCGCCGCCG.CAcgccccg                                                                           >  2:2930340/1‑99 (MQ=255)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGc                                                                          <  2:6536065/101‑1 (MQ=255)


                         aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGt                                                                        <  2:1983431/101‑1 (MQ=255)


                         aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCC.CCCCCCCCGccg                                                                        >  1:1201816/1‑99 (MQ=37)


                         aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGG..G..GGCCCCCC.CCcccccccccccc                                                                      >  1:3518052/1‑94 (MQ=38)


                           cGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTAt                                                                      <  2:2767749/101‑1 (MQ=255)


                            ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTAtt                                                                     >  2:3077225/1‑101 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTAttt                                                                    <  2:9146135/101‑1 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTAttt                                                                    <  2:5712104/101‑1 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTAttt                                                                    <  2:1868015/101‑1 (MQ=255)


                              ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCGCCACCCCCGGCGCAttt                                                                    >  2:1572324/1‑101 (MQ=37)


                              ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTg                                                                   <  2:6996994/101‑1 (MQ=255)


                              ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTg                                                                   <  2:4997892/101‑1 (MQ=255)


                               cgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGc                                                                  <  2:5232903/101‑1 (MQ=255)


                                 ccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCAc                                                                <  2:6366976/101‑1 (MQ=255)


                                  cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCAcc                                                               <  1:8682606/101‑1 (MQ=255)


                                   ttCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCa                                                              <  2:7389898/101‑1 (MQ=255)


                                    tCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAg                                                             <  1:2295737/101‑1 (MQ=255)


                                       ggcggcCTTTTTCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaa                                                          <  2:3317688/101‑1 (MQ=37)


                                       ggcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaa                                                          <  2:8153192/101‑1 (MQ=255)


                                       ggcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaa                                                          <  1:4922463/101‑1 (MQ=255)


                                        gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaaa                                                         <  1:1014671/101‑1 (MQ=255)


                                        gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaaa                                                         <  1:878224/101‑1 (MQ=255)


                                         cggcCTTTTGGCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGaaaa                                                        <  1:3846931/101‑1 (MQ=37)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGCGGGGGGG..C..CGCCCCCC.CCCCCCCCGCGCGTCTGCACCACGaaaaaaca                                                    >  2:8726138/1‑97 (MQ=21)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CCCCCCCCGCGTATTTGCACCAGGAaaagcca                                                    >  1:4863596/1‑101 (MQ=37)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagcca                                                    <  1:2950178/101‑1 (MQ=255)


                                              ttttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaa                                                   <  2:8909283/101‑1 (MQ=255)


                                              ttttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaa                                                   >  1:4667897/1‑101 (MQ=255)


                                              ttttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaa                                                   <  2:7722201/101‑1 (MQ=255)


                                               tttcgcccggCCCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..TGGGGCTC..CGCCCCCG.CCCCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  2:4231508/93‑1 (MQ=25)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  1:6224780/101‑1 (MQ=255)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  2:4341184/101‑1 (MQ=255)


                                                ttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaag                                                 <  2:8399252/101‑1 (MQ=255)


                                                ttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaag                                                 <  2:2371944/101‑1 (MQ=255)


                                                  gCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaagcc                                               <  2:7277918/101‑1 (MQ=255)


                                                   ccTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCg                                              <  2:6279546/101‑1 (MQ=255)


                                                   ccTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGGATTTGCACCAGGAAAAGCCAAAGCCg                                              >  2:6116925/1‑101 (MQ=37)


                                                    cTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCCAAGCCGt                                             >  1:5036639/1‑101 (MQ=37)


                                                      gggCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGGATTTGCACCAGGAAAAGCCAAAGCCGGcc                                           >  1:6591257/1‑101 (MQ=37)


                                                          gcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CCCCCCCCGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCgg                                       >  1:5831548/1‑101 (MQ=37)


                                                              aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGCGGGGGGG..C..CCCCCCCC.CCCCCCCCGCGCATTTTCCCCAAGAAAAACCCAAACCGCCCCCCGCCgg                                   >  1:5188708/1‑101 (MQ=12)


                                                              aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAgg                                   <  1:6108996/101‑1 (MQ=255)


                                                                gCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAc                                 <  1:7571212/101‑1 (MQ=255)


                                                                 cGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGGATTTGCACCAGGGAAAGCCAAAGCCGTCCCCGGCAGGGcc                                >  1:5589244/1‑101 (MQ=25)


                                                                  gTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCg                               <  2:6734048/101‑1 (MQ=255)


                                                                     tCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAg                            <  1:1635938/101‑1 (MQ=255)


                                                                      cGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                           <  2:4415395/101‑1 (MQ=255)


                                                                        ccTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGcc                         <  1:2652513/101‑1 (MQ=255)


                                                                         cTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCt                        <  2:4628297/101‑1 (MQ=255)


                                                                         cTTGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCt                        <  1:1845727/101‑1 (MQ=255)


                                                                           tGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      <  2:7536193/101‑1 (MQ=255)


                                                                           tGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      >  1:8599856/1‑101 (MQ=255)


                                                                           tGGCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      <  1:2219208/101‑1 (MQ=255)


                                                                            ggCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAg                     >  1:8203813/1‑101 (MQ=255)


                                                                            ggCTTCGCCAAGGCGACCC.GGC..GGGGGCCC..CGCCCCCG.CACCCCCGGCGGATTTTCACCCGGAAAAGCCCAAGCCGGCCCCCGCAGGACCGAAGGGCGCAg                     >  1:3270539/1‑101 (MQ=21)


                                                                             gCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTTAgg                    <  1:5709234/101‑1 (MQ=37)


                                                                             gCTTCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                    <  1:4435377/101‑1 (MQ=255)


                                                                              ctgcGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGa                   <  2:4838275/98‑1 (MQ=37)


                                                                              cTTCGCCAGGGCGGCCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGa                   <  1:7339576/101‑1 (MQ=37)


                                                                                tCGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcc                 <  2:8037225/101‑1 (MQ=255)


                                                                                 cGCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAccc                <  1:4028866/101‑1 (MQ=255)


                                                                                  gCCAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               <  1:1744056/101‑1 (MQ=255)


                                                                                   ccAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg              <  1:1992155/101‑1 (MQ=255)


                                                                                   ccAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCCAAGGCCTCAGGACCCCg              >  2:3445324/1‑101 (MQ=37)


                                                                                    cAAGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCCGGCACCCgg             >  2:3193595/1‑101 (MQ=25)


                                                                                      aGGCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGc           >  1:7877703/1‑101 (MQ=255)


                                                                                       ggCGACCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGcc          <  2:3530545/101‑1 (MQ=255)


                                                                                           aCCC.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtt      <  2:3761864/101‑1 (MQ=255)


                                                                                             cc.GGC..GGGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt    <  1:6845642/101‑1 (MQ=255)


                                                                                              c.ggc..ggGGGCTC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  2:3919035/101‑1 (MQ=255)


                                                                                                ggc..ggGGGCCC..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGCCCCCGGGCCCCTTTTAt  <  2:8266881/101‑1 (MQ=38)


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCC.GGC..GGGGG..C..CGCCCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG