| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 1478517 = | 458 (1.090) | 35 (0.080) | 6/184 | 36.8 | 0.09 | intergenic (+5/+138) | RCAP_rcc01372/RCAP_rcc01373 | ABC transporter ATP‑binding protein/RpiR family transcriptional regulator |
| ? | NC_014034 | 1640014 = | 283 (0.620) | intergenic (+94/‑51) | mccB/mccA | methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
Only 100 of 306 total aligned reads displayed.
CGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGG....G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGT > NC_014034/1639925‑1640114
|
ccTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGcc > 1:2863055/1‑101 (MQ=21)
cccGGGGGGGATTTTGGGGGAAAGATAACCCCCCTCCTTTC.CCTTTTCCCCCAAATAC.CCGGGGGGGCC.G..GGGG....GGC...CGCC...CCCCCCGCCACTTCCGCCAc < 1:6695880/100‑1 (MQ=255)
gggggATTTTGGGGACAAGA.CAAACCCCCCCCTTT.TCTTTTTCCCCAAAATC.CCCGGGGGGCC.C..GGGG....GGGCCCCC.....CCCCCCGCCACTTCCGCCACGGGGc < 1:4950533/100‑1 (MQ=255)
cggGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGc > 2:6211294/1‑101 (MQ=25)
cggGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGc > 1:7364468/1‑101 (MQ=25)
cggGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGc > 1:7421925/1‑101 (MQ=25)
ggggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCa > 1:1133889/1‑101 (MQ=25)
ggggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCa > 2:6307684/1‑101 (MQ=25)
gggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAg > 2:7546195/1‑101 (MQ=25)
ggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAgc > 1:1752287/1‑101 (MQ=25)
ggATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAgc > 1:8298140/1‑101 (MQ=25)
gATATTGGGGGCAAGATGAACCCCACCCTTTT.CATCTGCCCCAAAATAC.CCGGGGGGGCCGG..GGGG....G.....CGGCC..CCCCCCGCCACTTCCGCCACGGGGCAgcg < 2:4495633/101‑1 (MQ=255)
tatTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc > 1:6583268/1‑101 (MQ=25)
tatTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc > 2:1539840/1‑101 (MQ=25)
tttgggggCAGGAGCAACCCCTCCCCTTT.CCTCTT.CCCCAAAACC.CCCGGGGGGCC.C..GGGG....GGC...CGGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGccc < 1:619589/97‑1 (MQ=9)
atTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc > 2:4749591/1‑101 (MQ=25)
atTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc > 1:4426544/1‑101 (MQ=25)
atTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc > 2:6119043/1‑101 (MQ=25)
tttGGGGGAAAAATAACCCCCCCCCTTTCCATCTCCCCCCAAATCC.CGGGGGGGGCCGG..GGGG....G.....CGCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGccc < 1:7967255/101‑1 (MQ=255)
tttGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc > 1:7554290/1‑101 (MQ=25)
ttgggggAAAGATAACCCCCACCCCTTT.CTTCTTCCCCAAAATCC.CCGGGGGGGCC.G..GGGG....GGC...CGCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc < 1:4083098/98‑1 (MQ=255)
ttGGGGGAAAAAGAACCCCCTTCCTTT.CCTTTTCCCCCAAAATC.CCCGGGGGGCC.C..GGGG....GGC...CGCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc < 1:2060102/101‑1 (MQ=255)
tgggggCAAGAGGAACCCCACCCTTTT.CATCTGCCCCAAAATCC.CCGGGGGGGCCGG..GGGG....G.....CGGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg < 1:9191086/99‑1 (MQ=255)
tGGTGCAAGAAGAACCCTCCCCCTTC.CATTTTGCCCGAAATGG.CCGGGGGGCCCGG..GGGG....G.....CGGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg < 2:5848275/101‑1 (MQ=255)
ggggCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc > 2:7249915/1‑101 (MQ=25)
gggCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc > 1:9037053/1‑101 (MQ=25)
gggCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACCGGGCAGCGCCCCGGcg > 2:4952065/1‑100 (MQ=21)
gCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt > 2:8477234/1‑101 (MQ=25)
cAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt > 2:1039435/1‑101 (MQ=25)
aaGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg > 1:3865379/1‑101 (MQ=25)
aaGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg > 2:3591808/1‑101 (MQ=25)
aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa > 1:6840855/1‑101 (MQ=25)
aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa > 2:7382128/1‑101 (MQ=25)
gaagAAACCCCTCCCTTT.CCTTCTTCCCCAAAATC.CCCGGGGGGCC.C..GGGG....GGGCCCCC.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa < 2:5484338/98‑1 (MQ=255)
aTGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg > 2:4622447/1‑101 (MQ=25)
tGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGGAGCGCCCCGGCCGTTGACGa > 1:8825001/1‑101 (MQ=21)
tGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa > 2:4666865/1‑101 (MQ=25)
tGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa > 1:2283788/1‑101 (MQ=25)
tGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa > 1:1219939/1‑101 (MQ=25)
aaaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg > 2:2558581/1‑101 (MQ=25)
aaaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg > 2:9006013/1‑101 (MQ=25)
accccATCCCTTT.CCTTCTTCCCCAAATTC.CCGGGGGGGCC.CGGGGGG....G.....CGCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg < 2:691871/99‑1 (MQ=255)
aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg > 2:3372767/1‑101 (MQ=25)
aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg > 2:8229702/1‑101 (MQ=25)
aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg > 1:8759081/1‑101 (MQ=25)
accccccccTTT.CCACCTGGCCCAAATTCCCCCGGGGGGCC.G..GGGG....GCCAC.CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg < 2:9049522/95‑1 (MQ=255)
cccctcttttt.CATCGCGCCCAAAAT.C.CCGGGGGGGCC.C..GGGG....G.....CGCCCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag < 1:2988276/93‑1 (MQ=255)
cATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc > 2:6621774/1‑101 (MQ=25)
aTCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc > 2:8063806/1‑101 (MQ=21)
tCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGCGACcg > 2:2965927/1‑101 (MQ=21)
tCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCAACTCCGCCACAGTCCAGCGCCCCGGCCGTGGACGAAGGAGACcg > 1:586723/1‑101 (MQ=17)
cccTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGGCCCGGCCGTTGACGAAGGAGGCcgc > 2:6514684/1‑101 (MQ=21)
cccTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc > 1:5164135/1‑101 (MQ=25)
ttt.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt > 2:787272/1‑101 (MQ=25)
ttt.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt > 2:4330639/1‑101 (MQ=25)
tt.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg > 2:6479651/1‑101 (MQ=25)
tt.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg > 1:1038152/1‑101 (MQ=25)
tttcttcgcccccAAAATC.CCCGGGGGGCC.C..GGGG....G.....GGCCCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt < 1:8345632/92‑1 (MQ=255)
t.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt > 2:1396115/1‑101 (MQ=25)
cctcctcccccAAAGTC.CCCGGGGGGCC.CGGGGGG....G.....CGCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt < 1:71586/94‑1 (MQ=255)
cATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt > 2:7280503/1‑101 (MQ=25)
aTCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCAGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt > 2:3711283/1‑101 (MQ=25)
tCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGCAGGAGACCGCGATGTTTc > 1:133382/1‑101 (MQ=25)
cTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa > 1:726590/1‑101 (MQ=25)
ttGCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa > 1:3581661/1‑101 (MQ=25)
gCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa > 1:327259/1‑101 (MQ=25)
gCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa > 2:526267/1‑101 (MQ=25)
aaTAT.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt > 1:3483942/1‑101 (MQ=25)
atat.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg > 2:2784791/1‑101 (MQ=37)
aacgcgcGGGGGGCC.C..GGGG....G.....CGCACCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCTCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt < 2:4367386/95‑1 (MQ=255)
at.CCCGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcccagc > 2:4189053/1‑97 (MQ=25)
cGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc > 2:5697603/1‑101 (MQ=37)
cGGGGGGCC.C..GGGGGGCAG.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc > 1:4180200/1‑101 (MQ=37)
ccggggggcag.....cg.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGc > 2:3298667/11‑101 (MQ=255)
cggggggcag.....cg.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc > 2:609348/10‑101 (MQ=255)
ggggggcag.....cg.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg > 2:8860917/9‑101 (MQ=255)
ggggggcag.....cg.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg > 2:363259/9‑101 (MQ=255)
ggggggcag.....cg.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg > 2:1920138/9‑101 (MQ=255)
ggggcag.....cg.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag > 1:6809132/7‑101 (MQ=255)
ggcag.....cg.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt > 2:3893010/5‑101 (MQ=255)
gcag.....cg.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc > 1:7663735/4‑101 (MQ=255)
cccccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt < 2:5736268/94‑1 (MQ=255)
gcccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc < 2:2292328/95‑1 (MQ=255)
g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg > 2:8819130/1‑101 (MQ=255)
g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg > 1:5458665/1‑101 (MQ=255)
ccccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc < 1:5716308/95‑1 (MQ=255)
cgcccccacccGCCTCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg < 1:3711392/93‑1 (MQ=255)
ccgccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg < 1:8555404/96‑1 (MQ=255)
cccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg < 2:2131386/96‑1 (MQ=255)
ccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAACAGATCCTGATCGCCAACAGGGCCGAGATCGCCt < 1:6460931/99‑1 (MQ=255)
ccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCt < 1:4662339/99‑1 (MQ=255)
ccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt > 2:5196120/1‑101 (MQ=255)
ccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt < 1:5924022/101‑1 (MQ=255)
cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc > 1:1916733/1‑101 (MQ=255)
cacccGCCACTACCGCCACGGGGCAGCGCGCCGGCCGTTTACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc < 2:3098135/99‑1 (MQ=255)
ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg > 1:1465860/1‑101 (MQ=255)
cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg < 2:6948596/101‑1 (MQ=255)
cGCCCCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt < 1:2558654/101‑1 (MQ=255)
cGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt > 1:5563549/1‑101 (MQ=255)
cGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTCATCGCCAACAGGGCCGAGATCGCCTGTCgggg > 2:6748478/1‑100 (MQ=255)
|
CGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC.C..GGGG....G.....CG.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGT > NC_014034/1639925‑1640114
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 30 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|