BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1608051 =	0 (0.000)	145 (0.360)	37/176	19.3	0.43	intergenic (+321/‑26)	RCAP_rcc01484/murD	hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
*	?	NC_014034	2808467 =	382 (0.830)	145 (0.360)	37/176	19.3	0.43	intergenic (+22/+132)	pyrD2/acsA2	dihydroorotate oxidase/acetate‑‑CoA ligase
Rejected: Position hash score below cutoff.

Only 100 of 459 total aligned reads displayed.


CCTGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCCCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGA.GTGGCGCAG  >  NC_014034/2808367‑2808566


 cTGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGgtt                                                                                                     >  1:802228/1‑101 (MQ=255)


 cTGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGgtt                                                                                                     >  2:4637271/1‑101 (MQ=255)


 cTGGATGCGCTTTTGGCCCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGttt                                                                                                     <  2:8465637/101‑1 (MQ=255)


  tGGATGCGCTTTTGGCGCGCGCCGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTc                                                                                                    <  1:3705166/101‑1 (MQ=255)


  tGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTc                                                                                                    <  1:6158815/101‑1 (MQ=255)


   ggATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTca                                                                                                   <  1:7898010/101‑1 (MQ=255)


   ggATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTca                                                                                                   <  2:6440799/101‑1 (MQ=255)


   ggATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTcc                                                                                                   >  1:3002092/1‑100 (MQ=255)


       gcgcTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacc                                                                                               <  1:5317987/101‑1 (MQ=255)


        cgcTTTTGGCGCGCGACTGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGTTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcaccc                                                                                              <  1:4219527/101‑1 (MQ=255)


         gcTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccc                                                                                             >  1:5180377/1‑101 (MQ=255)


          gttttGGCGCGCGACGGGTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcaccccc                                                                                            <  1:8144043/100‑1 (MQ=255)


          cTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcaccccc                                                                                            <  1:4957000/101‑1 (MQ=255)


          cTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcaccccc                                                                                            <  1:1428877/101‑1 (MQ=255)


            ttcggCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccccgc                                                                                          >  2:44361/4‑101 (MQ=255)


               ggCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacc                                                                                       <  1:2164681/101‑1 (MQ=255)


               ggCGCGCGACGCCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacc                                                                                       <  2:178701/101‑1 (MQ=255)


                 cgcgcgCCGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacccc                                                                                     <  1:1037583/101‑1 (MQ=255)


                    gcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccccgcacccccgg                                                                                  >  2:6701975/1‑100 (MQ=255)


                     ggcggctgttGCTTCGGCCGCGGAAGCCTGGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTg                                                                                 <  1:7008399/93‑1 (MQ=25)


                      gccGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTgg                                                                                <  1:8619275/99‑1 (MQ=255)


                      gACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTgg                                                                                <  1:2692053/101‑1 (MQ=255)


                      gACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccccgcccccccccgg                                                                                >  2:2055995/1‑97 (MQ=38)


                       aCGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGc                                                                               >  2:5749856/1‑101 (MQ=255)


                        cGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCg                                                                              <  2:1461720/101‑1 (MQ=255)


                        cGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCACCCCCGTGGCg                                                                              >  1:7102892/1‑101 (MQ=255)


                         ggCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGt                                                                             >  2:6927401/1‑101 (MQ=255)


                         ggCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCACCCCCGGGGCGt                                                                             >  1:2419922/1‑101 (MQ=255)


                          gCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCACCCCCGTGGCGTa                                                                            >  1:4299129/1‑101 (MQ=255)


                          gCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAACGGTGGGGGTTTCATAAGCCCGCACTCCCACGGCgga                                                                            >  2:8867630/1‑99 (MQ=255)


                           cTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAt                                                                           <  1:1625801/101‑1 (MQ=255)


                             ttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGATCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAttt                                                                         <  1:5416009/101‑1 (MQ=255)


                             ttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAttt                                                                         <  2:2215868/101‑1 (MQ=255)


                             ttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAttt                                                                         <  2:5449038/101‑1 (MQ=255)


                              ggCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTg                                                                        <  2:1613893/100‑1 (MQ=255)


                                cTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTgcg                                                                      <  1:8396341/101‑1 (MQ=255)


                                  tCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGCGGGCTCTTTGCGcc                                                                    >  2:8384444/1‑101 (MQ=25)


                                    ggTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCaa                                                                  >  2:1980513/1‑101 (MQ=255)


                                    ggTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCaa                                                                  >  2:610867/1‑101 (MQ=255)


                                     gccgcgGAAGCCGGGGGCACCTGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                 <  1:9051353/99‑1 (MQ=255)


                                     gTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                 <  1:5827508/101‑1 (MQ=255)


                                     gTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                 <  1:7537090/101‑1 (MQ=255)


                                     gTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                 <  2:2874146/101‑1 (MQ=255)


                                        ggggAGGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGCCCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaca                                                              <  1:8780671/99‑3 (MQ=25)


                                        gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                              <  1:8872315/101‑1 (MQ=255)


                                        gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                              <  2:9026754/101‑1 (MQ=255)


                                        gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                              <  1:780720/101‑1 (MQ=255)


                                        gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                              <  1:1324484/101‑1 (MQ=255)


                                          ggAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaaa                                                            >  1:7506129/1‑101 (MQ=255)


                                          ggAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaaa                                                            >  1:3527851/1‑101 (MQ=255)


                                          ggAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaaa                                                            >  2:6395202/1‑101 (MQ=255)


                                          ggAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaaa                                                            >  1:4429937/1‑101 (MQ=255)


                                           gAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAg                                                           <  1:7295638/101‑1 (MQ=255)


                                            aaGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGc                                                          >  1:3354606/1‑101 (MQ=255)


                                              gCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGcac                                                        <  1:4828056/101‑1 (MQ=255)


                                                cGTGGGCCCCGATCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAg                                                      <  2:8118110/101‑1 (MQ=255)


                                                cGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAg                                                      >  2:119480/1‑101 (MQ=255)


                                                cGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAg                                                      >  1:7416541/1‑101 (MQ=255)


                                                  tGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGAc                                                    >  2:1745988/1‑101 (MQ=255)


                                                  tGGGCACCGGTCGCAGCCGCCGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGAc                                                    <  1:5645709/101‑1 (MQ=255)


                                                   gggCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACt                                                   >  2:4170326/1‑101 (MQ=255)


                                                     gCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCCCACCCCCGCACCCCCGCGGCGTATTTGCGCCAAGAAAAAGCACAGACttt                                                 >  2:1033645/1‑101 (MQ=255)


                                                     gCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACttt                                                 <  1:1165121/101‑1 (MQ=255)


                                                     gCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACttt                                                 <  2:5180208/101‑1 (MQ=255)


                                                      cACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACtttt                                                <  2:3547097/101‑1 (MQ=255)


                                                       cccGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTg                                               <  2:7706185/100‑1 (MQ=255)


                                                         cGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGcc                                             <  2:7316731/101‑1 (MQ=255)


                                                          ggTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGccc                                            <  2:8623244/101‑1 (MQ=255)


                                                          ggTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGccc                                            >  2:7847654/1‑101 (MQ=255)


                                                             cGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGtt                                         <  2:7430372/101‑1 (MQ=255)


                                                             cGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGtt                                         <  2:5506244/101‑1 (MQ=255)


                                                             cGCAGCCGCTGGCTCTGACCCGCCCGTACCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGtt                                         <  1:6397781/101‑1 (MQ=255)


                                                               cAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCa                                       >  2:3812468/1‑101 (MQ=255)


                                                                aGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCAc                                      >  1:1588823/1‑101 (MQ=255)


                                                                   cGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCt                                   <  1:3951616/101‑1 (MQ=255)


                                                                    gCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTg                                  <  2:3881857/101‑1 (MQ=255)


                                                                       ggCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGgcg                               <  1:6647691/101‑1 (MQ=255)


                                                                          tcTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCaa                            >  2:3182999/2‑101 (MQ=255)


                                                                            tGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAt                          <  2:802215/101‑1 (MQ=40)


                                                                            tGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAt                          <  2:4845184/101‑1 (MQ=40)


                                                                            tGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAt                          <  1:4637406/101‑1 (MQ=40)


                                                                             gACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCTCCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAtc                         <  1:2277946/101‑1 (MQ=255)


                                                                             gACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAtc                         >  1:6088596/1‑101 (MQ=40)


                                                                                 cgcccgTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTccc                     <  2:7119410/101‑1 (MQ=39)


                                                                                 cgcccgTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTccc                     <  1:672834/101‑1 (MQ=40)


                                                                                  gcccgTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCg                    <  1:2056057/101‑1 (MQ=40)


                                                                                  gcccgTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCg                    <  2:565872/101‑1 (MQ=39)


                                                                                      gTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCggggg                <  2:5777499/101‑1 (MQ=39)


                                                                                      gTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCggggg                >  2:2713405/1‑101 (MQ=39)


                                                                                       tAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAACGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCgggggg               <  2:6265703/101‑1 (MQ=255)


                                                                                       tAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCgggggg               >  1:5982006/1‑101 (MQ=39)


                                                                                       tAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCgggggg               <  1:4535762/101‑1 (MQ=39)


                                                                                         gCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGgag             >  1:8484901/1‑101 (MQ=39)


                                                                                         gCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGgag             >  1:1718197/1‑101 (MQ=39)


                                                                                         gCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGgag             <  2:4998961/101‑1 (MQ=39)


                                                                                           tGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.g          <  2:8559762/101‑1 (MQ=37)


                                                                                             cGGGGGTTTCACGCCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.ggt        <  2:819750/101‑3 (MQ=18)


                                                                                                    ttCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAg  >  2:2321576/1‑101 (MQ=9)


                                                                                                    ttCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAg  <  2:5284279/101‑1 (MQ=9)


                                                                                                    ttCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAg  >  1:5086101/1‑101 (MQ=12)


CCTGGATGCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCCCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGA.GTGGCGCAG  >  NC_014034/2808367‑2808566

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG