BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1696245	324 (0.910)	92 (0.260)	26/156	21.5	0.31	intergenic (‑173/+52)	RCAP_rcc01564/mmsA	isobutyryl‑CoA dehydrogenase/methylmalonate‑semialdehyde dehydrogenase
*	?	NC_014034	= 2330175	81 (0.180)	92 (0.260)	26/156	21.5	0.31	intergenic (+150/+162)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 190 total aligned reads displayed.


CGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......CGG....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACCGG  >  NC_014034/2330075‑2330246


  gCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgc....ggg                                                                                   >  1:1800644/1‑99 (MQ=255)


   cTTGTCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggg                                                                           <  2:2397268/101‑1 (MQ=255)


   cTTGGCCTCCGCCAAGGGCGGCAACGGCGCTCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggg                                                                           <  1:9054214/101‑1 (MQ=255)


      ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Gggggg                                                                        >  1:4350971/1‑98 (MQ=255)


      ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggct                                                                        <  1:44964/101‑4 (MQ=255)


      ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggct                                                                        <  1:8442233/101‑4 (MQ=255)


       gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggggg                                                                       >  1:678824/1‑97 (MQ=255)


       gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctc                                                                       <  2:8853512/101‑5 (MQ=255)


       gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctc                                                                       <  2:7075133/101‑5 (MQ=255)


       gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctc                                                                       <  1:4140367/101‑5 (MQ=255)


        ccTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctcc                                                                      <  2:3619556/101‑6 (MQ=255)


        ccTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctcc                                                                      <  1:7270785/101‑6 (MQ=255)


           ccGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctccgcc                                                                   <  1:2389370/101‑9 (MQ=255)


             gCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctccgcccc                                                                 <  2:6895057/101‑11 (MQ=37)


               cAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCCGGCG...G.......GGG....CTCCGCCcccc                                                            >  2:7866671/1‑101 (MQ=37)


                 aGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......GGG....GCTCCCCccccccc                                                         >  1:3512954/1‑99 (MQ=37)


                                 gcAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTgc                                                >  2:3005528/1‑101 (MQ=18)


                                   agagCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGGTCCGC....CCCCGCACCCCCGGCGTATTTgcgc                                              >  1:7394452/1‑101 (MQ=21)


                                        gccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGa                                         <  1:8961108/101‑1 (MQ=18)


                                         ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  1:487212/101‑1 (MQ=18)


                                         ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  2:6086929/101‑1 (MQ=18)


                                         ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  2:2919808/101‑1 (MQ=18)


                                         ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  2:3910292/101‑1 (MQ=18)


                                         ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  2:7548481/101‑1 (MQ=18)


                                          cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                       <  1:7900413/101‑1 (MQ=18)


                                          cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                       <  1:811931/101‑1 (MQ=18)


                                          cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                       <  2:4738162/101‑1 (MQ=18)


                                           gccgggATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTA.TTGCGCCAAGaaaaa                                     <  2:4358014/97‑1 (MQ=12)


                                           gcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaaa                                      >  1:6924632/1‑101 (MQ=18)


                                           gcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaaa                                      <  1:7526343/101‑1 (MQ=18)


                                            cACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaaaa                                     <  1:2247517/101‑1 (MQ=17)


                                               ggATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGGCAAAGcc                                  >  2:1600435/1‑101 (MQ=12)


                                                gATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCg                                 >  2:1456266/1‑101 (MQ=17)


                                                gATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCg                                 >  2:2056584/1‑101 (MQ=17)


                                                   cGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCgggg                              <  1:3198045/101‑1 (MQ=17)


                                                   cGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCgggg                              <  2:1048231/101‑1 (MQ=17)


                                                   cGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGCATTTGCGCCCAGAAAAAGCCgggg                              >  2:1722849/1‑101 (MQ=12)


                                                    ggCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgc                             <  2:3926340/101‑1 (MQ=17)


                                                    ggCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgc                             <  2:5904020/101‑1 (MQ=17)


                                                     gCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcg                            <  1:6470358/101‑1 (MQ=17)


                                                       cGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcg                          <  1:8364928/101‑1 (MQ=17)


                                                       cGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcg                          >  2:6432431/1‑101 (MQ=17)


                                                        gATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcgc                         >  2:1913684/1‑101 (MQ=17)


                                                         aTGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCa                        >  1:3918868/1‑101 (MQ=17)


                                                          tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                       >  1:4392142/1‑101 (MQ=17)


                                                          tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                       <  2:3369455/101‑1 (MQ=17)


                                                          tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGGATTTGCGCCCAGAAAAAGCCGGGGCGGGCag                       >  2:4125974/1‑100 (MQ=12)


                                                          tGGCGGACAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                       <  2:6551658/101‑1 (MQ=17)


                                                           ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCTGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      <  1:8552192/101‑1 (MQ=17)


                                                           ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      <  1:8523836/101‑1 (MQ=17)


                                                           ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      <  1:7614737/101‑1 (MQ=17)


                                                           ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      <  1:75047/101‑1 (MQ=17)


                                                           ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      >  1:3389855/1‑101 (MQ=17)


                                                           ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      <  1:6689945/101‑1 (MQ=17)


                                                           ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      <  2:7728610/101‑1 (MQ=17)


                                                           ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCC.GGGCGCGCATGc                     <  1:2128357/101‑1 (MQ=12)


                                                            gCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGc                     <  2:87974/101‑1 (MQ=18)


                                                              ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.gg                  >  2:8122467/1‑101 (MQ=17)


                                                              ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.gg                  <  1:1643072/101‑1 (MQ=17)


                                                              ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.gg                  >  1:4576587/1‑101 (MQ=17)


                                                              ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAACCGGGGCGCGCATGC.gg                  >  1:1918111/1‑101 (MQ=14)


                                                              ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGGATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.gg                  >  1:5670504/1‑101 (MQ=17)


                                                               gagaGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.ggg                 >  1:7329465/1‑101 (MQ=17)


                                                                agagGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGGTCCGC....CCCCCCAACCCCCGCGGATTTGCGCCAAAAAAAAGCCGGGGCGCGCATGC.gggg                >  1:2514825/1‑101 (MQ=12)


                                                                agagGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.gggg                <  1:2544016/101‑1 (MQ=17)


                                                                  agGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcc              >  1:2722917/1‑101 (MQ=17)


                                                                  agGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcc              >  2:8635043/1‑101 (MQ=17)


                                                                   ggAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGccc             >  2:1305602/1‑101 (MQ=17)


                                                                    gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcccc            <  2:5224707/101‑1 (MQ=17)


                                                                    gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcccc            <  2:6658794/101‑1 (MQ=17)


                                                                    gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcccc            <  1:1224810/101‑1 (MQ=17)


                                                                    gAAGTTCGCCGCGCAGGCGCGGCGCCCCGGGCTGGGGCTC....CGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcccc            <  1:6262510/101‑1 (MQ=12)


                                                                     aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCg           <  2:5670297/101‑1 (MQ=17)


                                                                     aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCg           <  2:9046953/101‑1 (MQ=17)


                                                                     aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCg           >  1:5072806/1‑101 (MQ=17)


                                                                     aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCg           <  1:5536594/101‑1 (MQ=17)


                                                                      aTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGGCAAGAAAAAGCCGGGGCGCGCATGG.CGGGCCCCgg          >  1:9036147/1‑101 (MQ=9)


                                                                      aTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCgg          <  2:2193900/101‑1 (MQ=17)


                                                                       tttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGa         <  1:1056804/101‑1 (MQ=17)


                                                                       tttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGa         >  2:5433419/1‑101 (MQ=17)


                                                                       tttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGa         <  2:7789679/101‑1 (MQ=17)


                                                                        ttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGGTCCGC....CCCCGCACCCCCCGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGGCCCCggc         >  2:7208392/1‑100 (MQ=16)


                                                                        ttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGAt        >  1:4012579/1‑101 (MQ=17)


                                                                        ttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCACGC.GGGGTCCCGGac        >  1:5967520/1‑100 (MQ=9)


                                                                         tCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATc       <  1:1279434/101‑1 (MQ=18)


                                                                         tCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATc       >  2:3649355/1‑101 (MQ=18)


                                                                          cgccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCa      <  1:6971520/101‑1 (MQ=18)


                                                                          cgccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCa      <  2:1541612/101‑1 (MQ=18)


                                                                          cgccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCa      >  1:2282638/1‑101 (MQ=18)


                                                                          cgccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCa      >  2:5315108/1‑101 (MQ=18)


                                                                           gccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCAc     <  2:7144813/101‑1 (MQ=18)


                                                                           gccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCAc     <  2:594405/101‑1 (MQ=18)


                                                                            ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGTATGC.GGGGCCCCGGATCAcc    <  1:8226039/101‑1 (MQ=17)


                                                                            ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCAcc    <  1:8972661/101‑1 (MQ=18)


                                                                            ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCAcc    <  2:1410211/101‑1 (MQ=18)


                                                                             cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCCCcg   >  1:2778332/1‑101 (MQ=17)


                                                                             cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACcg   <  2:7126351/101‑1 (MQ=18)


                                                                             cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACcg   <  1:2854385/101‑1 (MQ=18)


                                                                             cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACcg   <  2:8257996/101‑1 (MQ=18)


                                                                              gcgcAGGCGCGGCGACCCGGGCGGG.G.......CGGCCCCCCCCGCACCCCCCGCGGATTTTGGCCAAGAAAAAGGCGGGGGGCGCACGG.GGGGGCCCggcgcccccc  >  1:5927470/1‑93 (MQ=255)


CGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......CGG....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACCGG  >  NC_014034/2330075‑2330246

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG