BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1732870 =	71 (0.200)	90 (0.260)	19/154	24.7	0.48	intergenic (‑294/‑109)	RCAP_rcc01601/tgt	FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
*	?	NC_014034	= 2474937	121 (0.260)	90 (0.260)	19/154	24.7	0.48	intergenic (‑100/+26)	RCAP_rcc02301/engA	hypothetical protein/GTP‑binding protein EngA
Rejected: Position hash score below cutoff.

Only 100 of 148 total aligned reads displayed.


AAGGTGACAGGAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGCGGGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCTTCGTCAG  >  NC_014034/2474836‑2475037


aaGGTGACAGGAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGt                                                                                                         >  1:1466094/1‑101 (MQ=255)


   gTGACAGGAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGGGCGGGGGGG.GCAGCCCCC..C.GCGGGG.CG.c                                                                                                    >  1:2296627/1‑101 (MQ=255)


     gACAGGAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.cgc                                                                                                  >  2:6426558/1‑99 (MQ=255)


     gACAGGAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.ccc                                                                                                  >  1:8582025/1‑100 (MQ=255)


      aCAGGAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.cccc                                                                                                 >  1:9150258/1‑99 (MQ=255)


         ggAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCggg                                                                                              >  1:7037550/1‑101 (MQ=255)


          gAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCCCCGGc                                                                                             >  1:3760091/1‑101 (MQ=255)


          gAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCGGGc                                                                                             >  2:1250170/1‑101 (MQ=255)


           aaaCCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCCGGCt                                                                                            >  1:4067617/1‑101 (MQ=255)


           aaaCCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCCGGcg                                                                                            >  2:2583997/1‑100 (MQ=37)


            aaCCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCCGGCtt                                                                                           >  2:160685/1‑101 (MQ=37)


            aaCCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGC.CG.CCCCCGGcct                                                                                           >  1:9003554/1‑99 (MQ=25)


            aaCCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGGGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCGGGGtt                                                                                           >  1:8611702/1‑101 (MQ=38)


              ccGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.cccccgggctgc                                                                                         >  1:4729219/1‑91 (MQ=25)


               cgcgGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCCGGGCTGcc                                                                                        >  2:5988150/1‑101 (MQ=25)


                 cgGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.GCCCGGGCGTGCCCg                                                                                      >  2:2472169/1‑101 (MQ=25)


                  ggCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCGGGCGTTccccc                                                                                     >  2:1988890/1‑99 (MQ=25)


                  ggCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.CCGGGG.CG.GCCCGGGccgggccgg                                                                                     >  2:4968471/1‑93 (MQ=25)


                    ccccccccACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCCGGCGTGCCCGCgg                                                                                   >  2:6399572/1‑101 (MQ=25)


                       cccccACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.GG.CCTCCGGCCTGcccccggggg                                                                                >  2:1921883/1‑94 (MQ=21)


                        ccccACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGGCCCC..C.GCGGGTGCG.CC.CGGGGCTGCCCGCGGCGaa                                                                               >  1:1798722/1‑100 (MQ=21)


                        ccccACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGC.CG.CCTCCGGCTTGCCCggcgcggg                                                                               >  1:8925476/1‑94 (MQ=25)


                         cccACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGC.CG.CCCCCGGCCTGGCCGCGGCggac                                                                              >  1:4638168/1‑98 (MQ=21)


                           cACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CGCCCCCGGGCTGGCCCGGggggcggc                                                                             >  1:3152363/1‑95 (MQ=21)


                            aCCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCa                                                                           >  2:1116186/1‑101 (MQ=255)


                               cGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCCGGCTTGCCCGCGGGGGCATCA.Gcc                                                                       >  2:6763034/1‑101 (MQ=25)


                                gAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGCGGGGGCATCA.Gccc                                                                      >  1:5442706/1‑101 (MQ=25)


                                gAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.GG.CCCCGGGGCTGCCCCCGGCGGCacaagcac                                                                       >  2:1715352/1‑94 (MQ=18)


                                gAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.GCTCGGGCGTGGCCCAGGGGGCATCC.Gccc                                                                      >  2:1863183/1‑101 (MQ=21)


                                  aCGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCCCGGGCTTGCCCGAGGCGACAACC.Gccccc                                                                    >  2:1131359/1‑99 (MQ=21)


                                  aCGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCCGGCCTGCCCGAGGCGGCATCA.GCCCtt                                                                    >  2:314508/1‑101 (MQ=21)


                                    ggCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGGCCGAGGCGCCACCA.GCCCCTCg                                                                  >  2:5621468/1‑101 (MQ=21)


                                    ggCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGGCCGAGGCGACATCA.GCCCCTCg                                                                  >  2:6780975/1‑101 (MQ=255)


                                     gCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.GCTCGGGCTTGCCCGAGGCGGCATCC.GCCCCTCgg                                                                 >  2:1984773/1‑101 (MQ=21)


                                         ggCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCCCGGGCTTGCCCGAGGGGACAACA.GCCCTTCGGgttt                                                             >  2:4677899/1‑100 (MQ=21)


                                         ggCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCGGGGCTGCCCCAGGGGGCCACA.GCCCCTCGGGTTc                                                             >  1:2896660/1‑101 (MQ=12)


                                         ggCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGA.CG.CCTCGGGCTTGCCCGAGGCGACCTCA.GCCCTTCGGTTTc                                                             >  1:1334504/1‑101 (MQ=255)


                                           cTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGCGGCGGCATCC.GCCCCTCGGGTTCGa                                                           >  2:2274305/1‑101 (MQ=18)


                                            ttttCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCGGGCTTGCCCGCGGCGCAATCA.GCCCTTCGGGTTCggg                                                          >  2:8149375/1‑99 (MQ=21)


                                              ttCCTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGCGGGGGCCTCA.GCCCTTCGGTTTTGAggg                                                        >  2:5160962/1‑101 (MQ=21)


                                                ccTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGA.CG.CCTCGGGCTTGCCCCAGGCGACGTCC.GCCCCTCGGTTTCGTTGGCa                                                      >  2:2593900/1‑101 (MQ=18)


                                                 cTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTCCGGTTTCGCGGGCAg                                                     >  1:537469/1‑101 (MQ=255)


                                                 cTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCGGGCTTGCCCGGGGGGACATCA.GCCCCTCGGTTTTGGggggcg                                                     >  1:730060/1‑98 (MQ=21)


                                                 cTTGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCGGGCTTGCCCGAGGCGGCATCC.GCCCCTCGGTTTCCAGGGCAg                                                     >  2:4409842/1‑101 (MQ=21)


                                                   tGGCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCCCGGGCTTGCCCGGGGCGGCATCC.GCCCTTCGGTTTCGAGGGCAGGc                                                   >  1:5035534/1‑101 (MQ=25)


                                                    ggCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGGGGCGGCATCA.GCCCCTCGGGTTCGAGGGGAGGcc                                                  >  2:5183326/1‑101 (MQ=21)


                                                    ggCCAAATACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCGGGCCTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGcc                                                  >  1:8062820/1‑101 (MQ=255)


                                                        aaaTACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCCCGGGCCTGGCCGGGGCGACATCC.GCCCTTCGGGTTCGAggggccgcccctg                                              >  2:8999607/1‑91 (MQ=18)


                                                         aaTACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCCCGGGGTTGCCCGAGGCGGCAACA.GCCCCTCGGGTTTGCGGGGAGGGCCCTGt                                             >  2:1801507/1‑101 (MQ=12)


                                                          aTACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCGGGCGTGGCCCGGGGGGCATCC.GCCCCTCGGTTTTCAGGGGCGGGCCCTGTc                                            >  1:7791465/1‑101 (MQ=9)


                                                          aTACGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGC.CG.CCCCGGGCTTGCCCCAGGGGGCAGCA.GCCCCTCGGGTTCGAGGGCAGGGCCTTGTc                                            >  1:1549277/1‑101 (MQ=18)


                                                            aCGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGGCCCAGGCGGCCCCA.GGCCCTCCGGTTCGCGGGGAGGCCCCTGTCCt                                          >  2:2728191/1‑101 (MQ=9)


                                                            aCGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCt                                          >  1:2537330/1‑101 (MQ=255)


                                                            aCGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCCGGTTCGAGGGCAGGCCCTTGTCCt                                          >  2:1703920/1‑101 (MQ=255)


                                                             cGCAAGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCGGGGTTGCCCCGGGGGGCATCA.GCCCCTCGGGTTCGAGGGGCGGCCCTTGTccct                                         >  1:1839946/1‑99 (MQ=16)


                                                              gggggggggggggGGGGGGGGGCCGCCCCCCCC..G.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCtt                                         <  1:5518062/94‑1 (MQ=25)


                                                                aaGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCCGGCCCTTGTCCTtgcg                                      >  2:6375760/1‑101 (MQ=255)


                                                                 aGGCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCGGGCTTGCCCGCGGCGACATCA.GCCCTTCGGGTTCGAGGGCAGGCCCTTGTCCTtgcgg                                     >  1:6982917/1‑100 (MQ=25)


                                                                  ggCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGGCATCA.GCCCTTCGGGTTCGCGGGCAGGGCCTTGTCCTtgcgtg                                    >  1:6888949/1‑101 (MQ=21)


                                                                  ggCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCGGGCTTGCCCGAGGGGACATCA.GCCCCTCGGTTTCGAGGGCAGGCCCTTGTCCtttggtg                                    >  1:6534750/1‑96 (MQ=21)


                                                                  ggCGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCCCGGGCTTGGCCGGGGCGACATAA.GCCCTTCCGGTTTGAGGGGAGGGCCTTGTCCTttcggg                                    >  2:267620/1‑99 (MQ=12)


                                                                  gcgggggggGGGGGGGGGGCGCCCCCCCCGGCGGCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTtg                                        <  1:6117163/98‑1 (MQ=25)


                                                                    gggggggGGGGGGGGGCCCCCCCCCCC..CGGCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTtgcgtg                                    <  1:5050594/100‑1 (MQ=25)


                                                                    cGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTtgcgtgcg                                  >  2:8501831/1‑101 (MQ=255)


                                                                    cGGGGGGTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCCTGTCCTtgcgtgcg                                  >  1:8574234/1‑101 (MQ=255)


                                                                     ggggggTGC.GGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGGCTTCCCCAGGCGCCATCC.GCCCTTCGGTTTCGAGGGCGGGCCCTTGTCCCTGCGCgcgg                                 >  1:2247369/1‑101 (MQ=18)


                                                                      gggggTGC.GGGGGGCGCAGCCCCC..C.GCGGGG.CG.CCTCGGGGTTGGCCCAGGCGACATCA.GCCCCTCGGGTTTGGGGGGCGGGCCTTGTTCTTGTGTggggg                                >  2:1764920/1‑100 (MQ=9)


                                                                           ttggttccggCGCACCCCCC..C.GCGGGT.CG.CCTCGGGGTTTCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCgtgt                            <  1:4281573/93‑1 (MQ=38)


                                                                               ggggggCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTttct                        >  2:6297910/1‑101 (MQ=255)


                                                                               ggggggCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGGGGttct                        >  2:4659904/1‑101 (MQ=255)


                                                                                gggggCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGGTTGCCCGAGGCGACATCA.GCCCTTCGGGTTCGAGGGGAGGCCCTTGTCCTTGCGTGCGGCGGGGttctt                       >  1:3229264/1‑101 (MQ=37)


                                                                                gggggCGCAGCCCCC..C.GCGGGT.CC.CCTCGGGCTTGCCCGAGGCGACACCA.GCCCTTCCATTTCGAGGGCAGGCCCTTGTCCTTGCGCGGCGCGTGGttctt                       >  2:8987328/1‑101 (MQ=25)


                                                                                 ggggCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTttcttc                      >  1:5412464/1‑101 (MQ=255)


                                                                                 ggcccccccccccc..c.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTttcttc                      <  1:3612612/92‑1 (MQ=255)


                                                                                  gggCGCAGCCCCC..C.GCGGGT.CG.CCCCGGGCTTGCCCGCGGCGACATCAGGCCCTTCGG.TTCGACGGCAGGTCCTTGTCCCTGCCAGCGGCGTGGttcttcc                     >  2:597390/1‑100 (MQ=21)


                                                                                   ggCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGc                    >  2:1607791/1‑101 (MQ=255)


                                                                                   ggCGCAGCCCCC..C.GCGGGA.TG.CAGCGGGCTTGCCCGGGGCTACATCA.GCCCATAGGTTTCGCGGTCAGGCCCTTGTTCATGCGTGCGGCgtggaaagagca                    >  2:4281459/1‑92 (MQ=255)


                                                                                     cgcAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGCGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGccc                  >  2:371413/1‑100 (MQ=255)


                                                                                      gcAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGGTTCTTCGCCTc                 >  1:6627357/1‑101 (MQ=255)


                                                                                      ccgcgcccc..g.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTc                 <  1:1116204/96‑1 (MQ=255)


                                                                                      cccccgccc..g.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTc                 <  2:4638019/95‑1 (MQ=255)


                                                                                      ccccccccc..g.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTc                 <  1:928101/97‑1 (MQ=255)


                                                                                        aGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCgc               >  1:3832872/1‑100 (MQ=255)


                                                                                        aGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGa               >  1:3565867/1‑101 (MQ=255)


                                                                                         gCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGAc              >  1:5946061/1‑101 (MQ=255)


                                                                                         gCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGGGTTTCTTCGCCTCGAc              >  2:3954621/1‑101 (MQ=255)


                                                                                         gCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGGGTTTCTTCGCCTCCAc              >  2:7467057/1‑101 (MQ=255)


                                                                                         ccccccccgggcgGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTc                 <  1:1721038/91‑1 (MQ=255)


                                                                                           cccc..c.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGt            >  2:5677308/1‑101 (MQ=255)


                                                                                             ccgccggcgGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACg             <  1:6781246/95‑1 (MQ=255)


                                                                                             cc..c.GCGGGT.CG.CCCCGGGCTTGCCCGCGGCGACCTCA.GCCCTTCGGTTCCGGGGGCCGGGCCTTTGCCTTGCGTGCGGCGTGCTTCTTCGCCTCCACGTGc          >  2:3219625/1‑101 (MQ=255)


                                                                                              c..c.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCt         <  2:8584107/101‑1 (MQ=255)


                                                                                              c..c.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACAACA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCCTGCGGCGGGTTTCTTCGCCCCGACGCGCt         >  2:4905503/1‑101 (MQ=38)


                                                                                                 c.gcgGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCtt        <  2:8279489/101‑1 (MQ=255)


                                                                                                    cgGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCTTCg      >  1:8605088/1‑101 (MQ=255)


                                                                                                    cgGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCTTCg      >  1:6213724/1‑101 (MQ=255)


                                                                                                      ggT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCTTCGTc    <  1:8288026/101‑1 (MQ=255)


                                                                                                      ggT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCTTCGTc    <  2:8659434/101‑1 (MQ=255)


                                                                                                       gT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCTTCGTCa   <  1:1247572/101‑1 (MQ=255)


                                                                                                        t.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCTTCGTCAg  <  1:1686646/101‑1 (MQ=255)


AAGGTGACAGGAAACCGCGGCCCCCCCCACCCGAACGGCCCGGCTTTTCCTTGGCCAAATACGCAAGGCGGGGGGTGCGGGGGGGCGCAGCCCCC..C.GCGGGT.CG.CCTCGGGCTTGCCCGAGGCGACATCA.GCCCTTCGGTTTCGAGGGCAGGCCCTTGTCCTTGCGTGCGGCGTGTTTCTTCGCCTCGACGTGCTTCGTCAG  >  NC_014034/2474836‑2475037

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG