BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2330175	114 (0.270)	93 (0.220)	17/182	28.9	0.26	intergenic (+150/+162)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
*	?	NC_014034	2808473 =	408 (0.890)	93 (0.220)	17/182	28.9	0.26	intergenic (+28/+126)	pyrD2/acsA2	dihydroorotate oxidase/acetate‑‑CoA ligase
Rejected: Position hash score below cutoff.

Only 100 of 443 total aligned reads displayed.


GCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCCCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGA.GTGGCGCAGGCAAGT  >  NC_014034/2808374‑2808572


 cgcTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcaccc                                                                                                    >  1:3863901/1‑101 (MQ=255)


  gcTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccc                                                                                                   <  2:188235/101‑1 (MQ=255)


   cTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcaccccc                                                                                                  <  1:1428877/101‑1 (MQ=255)


   cTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcaccccc                                                                                                  <  1:6055640/101‑1 (MQ=255)


   cTTTGGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcaccccc                                                                                                  <  2:4461391/101‑1 (MQ=255)


     tttGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccccgc                                                                                                >  1:3541195/1‑101 (MQ=255)


       tGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccccgcac                                                                                              >  2:43002/1‑101 (MQ=255)


        ggggcgcgGCGGCTTTGCTGCGGGCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacc                                                                                             <  2:5479265/98‑1 (MQ=37)


          cgcgcgCCGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacccc                                                                                           <  1:1037583/101‑1 (MQ=255)


           gcgcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcaccccc                                                                                          <  2:2092563/101‑1 (MQ=255)


            cgcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacccccg                                                                                         <  1:2515044/101‑1 (MQ=255)


            cgcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCAcacccccgcacccccg                                                                                         <  1:7829937/101‑1 (MQ=255)


            cgcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccccgcacccccg                                                                                         >  1:2130006/1‑101 (MQ=255)


             gcgACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCAcacccccgcacccccgg                                                                                        >  2:6701975/1‑100 (MQ=255)


               gccGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTgg                                                                                      <  1:8619275/99‑1 (MQ=255)


               gACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTgg                                                                                      <  1:2692053/101‑1 (MQ=255)


                 cGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCACCCCCGTGGCg                                                                                    >  2:2000317/1‑101 (MQ=255)


                  ggCTTTTCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGCAGCTGCGGGGGTTTCACACCCCCGCACCCCCTGGGCGt                                                                                   >  2:6427206/1‑101 (MQ=37)


                    cTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAt                                                                                 <  1:1625801/101‑1 (MQ=255)


                    cTTTGCTTCGCTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAt                                                                                 <  2:8557482/101‑1 (MQ=255)


                    cTTTGCGCCGGTCGCGGAAGCGGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCCCCCCCGTGGCGTAt                                                                                 <  2:1649607/101‑1 (MQ=25)


                     tttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAtt                                                                                <  2:8848383/101‑1 (MQ=255)


                     tttGCTGCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAtt                                                                                <  2:1750004/101‑1 (MQ=255)


                      ttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAttt                                                                               <  1:6877871/101‑1 (MQ=255)


                      ttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAttt                                                                               <  1:5871100/101‑1 (MQ=255)


                      ttGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTAttt                                                                               <  1:7511019/101‑1 (MQ=255)


                           tgggTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGcc                                                                          <  2:2755702/99‑1 (MQ=255)


                           tCGTTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGcc                                                                          <  2:5698430/101‑1 (MQ=255)


                           tCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGcc                                                                          <  2:6889087/101‑1 (MQ=255)


                           tCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGCGGGCTCTTTGCGcc                                                                          >  2:8384444/1‑101 (MQ=25)


                             ggTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCaa                                                                        >  2:610867/1‑101 (MQ=255)


                              gTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                       <  2:2272836/101‑1 (MQ=255)


                              gTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                       <  2:8595940/101‑1 (MQ=255)


                              gTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                       <  1:7537090/101‑1 (MQ=255)


                              gTCGCGGAAGCCGTGGGCACCGCTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAg                                                                       <  2:5619438/101‑1 (MQ=255)


                                cgcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaa                                                                     <  2:5754956/101‑1 (MQ=255)


                                cgcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaa                                                                     >  1:6298610/1‑101 (MQ=255)


                                cgcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaa                                                                     <  2:6356295/101‑1 (MQ=255)


                                 gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                                    <  2:5239219/101‑1 (MQ=255)


                                 gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                                    <  2:9026754/101‑1 (MQ=255)


                                 gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                                    <  1:1575549/101‑1 (MQ=255)


                                 gcgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaa                                                                    <  1:1694975/101‑1 (MQ=255)


                                  cgGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaa                                                                   <  1:5359397/101‑1 (MQ=255)


                                   ggAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaaa                                                                  >  2:8079624/1‑101 (MQ=255)


                                   ggAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGGTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGaaaaa                                                                  >  1:4429937/1‑101 (MQ=255)


                                    gAAGCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAg                                                                 <  1:7295638/101‑1 (MQ=255)


                                     aaGCCGTGGGCACGGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGc                                                                <  2:384252/101‑1 (MQ=255)


                                       gCCGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGcac                                                              <  1:4828056/101‑1 (MQ=255)


                                        gctccggCATCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGcaca                                                             >  1:8800494/6‑101 (MQ=18)


                                         cGTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAg                                                            >  1:7416541/1‑101 (MQ=255)


                                          gTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGa                                                           <  1:8110712/101‑1 (MQ=255)


                                          gTGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGa                                                           >  1:4999121/1‑101 (MQ=255)


                                           tGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGAc                                                          <  1:4311820/101‑1 (MQ=255)


                                           tGGGCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGAc                                                          <  2:2371180/101‑1 (MQ=255)


                                            gggCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACt                                                         <  2:3167814/101‑1 (MQ=255)


                                              gCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCCCACCCCCGCACCCCCGCGGCGTATTTGCGCCAAGAAAAAGCACAGACttt                                                       >  2:1033645/1‑101 (MQ=255)


                                              gCACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACttt                                                       <  1:1165121/101‑1 (MQ=255)


                                               cACCGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACtttt                                                      <  1:299725/101‑1 (MQ=255)


                                                 ccGGTCGCAGCCGCTGGCTCTGACCCGCCCCTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGc                                                    <  1:3392451/101‑1 (MQ=255)


                                                  cGGTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGcc                                                   <  2:7316731/101‑1 (MQ=255)


                                                   ggTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGccc                                                  >  2:7847654/1‑101 (MQ=255)


                                                    gTCGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCg                                                 >  2:7161607/1‑101 (MQ=255)


                                                      cGCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGtt                                               <  2:3645523/101‑1 (MQ=255)


                                                       gCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTc                                              <  1:2247941/101‑1 (MQ=255)


                                                       gCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTc                                              <  2:282518/101‑1 (MQ=255)


                                                       gCAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTc                                              <  2:4994275/101‑1 (MQ=255)


                                                        cAGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCa                                             <  1:669329/101‑1 (MQ=255)


                                                         aGCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCAc                                            <  2:3414893/101‑1 (MQ=255)


                                                          gCCGCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCAcc                                           <  1:702851/101‑1 (MQ=255)


                                                             gCTGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTg                                        >  1:8386604/1‑101 (MQ=255)


                                                               tGGCTCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGgc                                      >  1:890361/1‑101 (MQ=255)


                                                                ggCTCTGACCCGCCCGTAGCTGCGGGTGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGgcg                                     <  2:1561923/101‑1 (MQ=255)


                                                                   tcTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCGCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTAACCCTGGCGCaa                                  <  1:6427455/100‑1 (MQ=255)


                                                                     tGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAt                                <  2:802215/101‑1 (MQ=40)


                                                                     tGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAt                                <  2:4845184/101‑1 (MQ=40)


                                                                     tGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAt                                <  1:4637406/101‑1 (MQ=40)


                                                                     tGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAt                                <  2:5840763/101‑1 (MQ=39)


                                                                      gACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAtc                               <  1:5710420/101‑1 (MQ=40)


                                                                      gACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAtc                               >  2:5361710/1‑101 (MQ=40)


                                                                       aCCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAAtct                              <  2:4010378/101‑1 (MQ=40)


                                                                              cgTAGCTGCGGGGGTTTCACCCCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCgggg                       <  2:7484750/101‑1 (MQ=255)


                                                                               gTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCggggg                      >  2:5157291/1‑101 (MQ=39)


                                                                                 aGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCggggggg                    >  1:7986029/1‑100 (MQ=39)


                                                                                 aGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGga                    >  2:7752065/1‑101 (MQ=39)


                                                                                  gCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGgag                   >  1:8484901/1‑101 (MQ=39)


                                                                                      cGGGGGTTTCACGCCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.ggt              <  2:819750/101‑3 (MQ=18)


                                                                                      cGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.ggg              >  1:2315558/1‑99 (MQ=21)


                                                                                       gggggTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.ggtg             >  1:4104590/1‑98 (MQ=17)


                                                                                        ggggTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.ggtgg            >  1:6111676/1‑97 (MQ=17)


                                                                                        ggggTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.ggtgg            >  1:460680/1‑97 (MQ=17)


                                                                                         gggTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGaga.ggtggc           <  1:1224009/101‑6 (MQ=11)


                                                                                          ggTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGA.GGgggcg          >  1:4220442/1‑98 (MQ=12)


                                                                                           gattCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGgcgc          >  1:5476335/3‑101 (MQ=2)


                                                                                             ttCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAg        >  1:5221947/1‑101 (MQ=12)


                                                                                             ttCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAg        >  1:5086101/1‑101 (MQ=12)


                                                                                              tCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAgg       >  2:6276712/1‑101 (MQ=16)


                                                                                              tCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGCGGCGCAgg       >  1:9107788/1‑101 (MQ=255)


                                                                                               cacaCCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAGGc      >  2:1340366/1‑101 (MQ=16)


                                                                                                 cacccccgcacccccgTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAGGCaa    <  1:2000378/101‑1 (MQ=12)


                                                                                                  acccccgcacccccgTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGAGGTGGCGCAGGCAAg   <  2:4711894/101‑1 (MQ=12)


GCGCTTTTGGCGCGCGACGGCTTTGCTTCGGTCGCGGAAGCCGTGGGCACCGGTCGCAGCCGCTGGCCCTGACCCGCCCGTAGCTGCGGGGGTTTCACACCCCCGCACCCCCGTGGCGTATTTGCGCCAAGAAAAAGCACAGACTTTTGCCCGTTCACCCTGGCGCAAATCTCCCGGGGGGAGA.GTGGCGCAGGCAAGT  >  NC_014034/2808374‑2808572

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG