BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2330290	171 (0.430)	103 (0.260)	9/174	33.3	0.42	intergenic (+265/+47)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
*	?	NC_014034	2880561 =	108 (0.240)	103 (0.260)	9/174	33.3	0.42	coding (1024/1053 nt)	pdxA	4‑hydroxythreonine‑4‑phosphate dehydrogenase
Rejected: Position hash score below cutoff.

Only 100 of 151 total aligned reads displayed.


TCATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........C..CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGC  >  NC_014034/2880461‑2880635


tCATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCg                                                                                                 >  1:5961738/1‑101 (MQ=255)


tCATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCg                                                                                                 >  2:5765021/1‑101 (MQ=255)


tCATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCACCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCg                                                                                                 <  2:4759815/101‑1 (MQ=255)


ccaggggTCGCGATCCCCTCGCGCAGGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCg                                                                                                 <  1:8566919/97‑1 (MQ=255)


 cATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                >  1:6668476/1‑101 (MQ=255)


 cATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                >  1:5636099/1‑101 (MQ=255)


 cATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                <  1:8168817/101‑1 (MQ=255)


 cATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                <  1:4071503/101‑1 (MQ=255)


 cATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                <  2:8265818/101‑1 (MQ=255)


 cATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgg                                                                                                >  1:1760260/1‑101 (MQ=255)


  aTGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCggg                                                                                               >  1:7053779/1‑101 (MQ=255)


  aTGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCggg                                                                                               >  1:2128790/1‑101 (MQ=255)


  aTGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCggg                                                                                               >  2:5635391/1‑101 (MQ=255)


   tGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTGATCTTGCTTCAAATATCCCGGGGGTCCgggg                                                                                              >  1:4510717/1‑101 (MQ=255)


   tGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCgggg                                                                                              <  1:1440435/101‑1 (MQ=255)


     ggTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGc                                                                                            <  1:3245504/101‑1 (MQ=255)


     ggTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGc                                                                                            >  2:3098422/1‑101 (MQ=255)


     ggTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGc                                                                                            >  2:4986176/1‑101 (MQ=255)


      gTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCa                                                                                           <  1:2026146/101‑1 (MQ=255)


      gTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCa                                                                                           <  2:6280922/101‑1 (MQ=255)


        ctcggtCACCTCGTGCAAGGGGGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCaga                                                                                         <  2:339372/96‑1 (MQ=255)


         gcgATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCagag                                                                                        <  1:2455182/101‑1 (MQ=255)


          cgATCTCCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGc                                                                                       <  1:3394298/101‑1 (MQ=255)


          cgATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGc                                                                                       >  1:5698692/1‑101 (MQ=255)


          cgATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGc                                                                                       >  1:8118452/1‑101 (MQ=255)


           gATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGcc                                                                                      >  1:7003041/1‑101 (MQ=255)


            aTCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccc                                                                                     >  1:5823852/1‑101 (MQ=255)


            aTCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccc                                                                                     >  1:8593124/1‑101 (MQ=255)


            aTCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccc                                                                                     >  2:2853760/1‑101 (MQ=255)


            aTCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccc                                                                                     >  2:5327282/1‑101 (MQ=255)


            aTCACCTCGCGCAAGGGCGGCAGCCCGTAAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGGCCGGGGGCAGAGccc                                                                                     <  1:7259903/101‑1 (MQ=255)


             tCACCTCGCGCAAGGGCGGCAGCCCGTCAGTCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGcccc                                                                                    <  2:8846317/101‑1 (MQ=255)


             tCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGcccc                                                                                    <  1:5765254/101‑1 (MQ=255)


              cACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccccc                                                                                   <  2:5414584/101‑1 (MQ=255)


              cACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccccc                                                                                   >  1:344807/1‑101 (MQ=255)


              cACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGccccc                                                                                   <  1:6886354/101‑1 (MQ=255)


              cACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGacccc                                                                                   <  1:1765740/101‑1 (MQ=255)


               aCCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCcg                                                                                  >  2:5854889/1‑101 (MQ=255)


                  tCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCcggcg                                                                               >  1:2921109/1‑101 (MQ=255)


                   cgcgCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCcggcg..........g                                                                    >  1:382083/1‑101 (MQ=255)


                    gggcAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCggcg..........gc                                                                   <  2:5228222/99‑1 (MQ=255)


                    gcgcAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCggcg..........gc                                                                   >  2:219829/1‑101 (MQ=255)


                    gcgcAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCggcg..........gc                                                                   >  2:8981381/1‑101 (MQ=255)


                    gcgcAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTGGCTTCAAATATCCAGGGTGCCCGGGGGCATAGcgccagctggt                                                                             >  2:6902252/1‑94 (MQ=255)


                      gcAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCggcg..........gcgc                                                                 >  1:1618120/1‑99 (MQ=255)


                       cAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGCCGGCGcccccccggccgcg                                                                          >  1:8936257/1‑92 (MQ=37)


                        aaGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgt                                                    >  2:7590196/1‑100 (MQ=255)


                        aaGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgt                                                    >  1:476800/1‑100 (MQ=255)


                         aGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGGAGAGCCCCgcgcg..........gggcgtc                                                              >  2:4231854/1‑95 (MQ=37)


                         aGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtc                                                   <  2:5039889/101‑3 (MQ=255)


                          gggCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtca                                                  >  2:592075/1‑98 (MQ=255)


                          gggCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtca                                                  >  1:3199919/1‑98 (MQ=255)


                           ggcggcAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcac                                                 <  2:7153059/101‑5 (MQ=255)


                            gcgccACCCCGTCAATCGCAGCCAAACCCCGCCCCCTTACTTTTCATCTTGCTTCAAATACCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcaca                                                <  1:6282027/101‑6 (MQ=21)


                               gcAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCGTCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcacagcc                                             >  2:4425404/1‑93 (MQ=25)


                                cAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGATTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........G..CGCCAccgccc                                            >  1:3134677/1‑100 (MQ=25)


                                 aGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcacagccgc                                           <  2:8592739/101‑11 (MQ=25)


                                 aGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcacagccgc                                           <  2:1669002/101‑11 (MQ=25)


                                 aGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........g..cgtcacagccgc                                           >  1:3741305/1‑91 (MQ=25)


                                                                    ttttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCcgc                   >  1:1409073/1‑101 (MQ=2)


                                                                     tttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCcgcg                  >  1:8931581/1‑101 (MQ=2)


                                                                     tttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCcgcg                  >  1:4939610/1‑101 (MQ=2)


                                                                     tttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCcgcg                  >  2:4117887/1‑101 (MQ=2)


                                                                      ttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGa                 >  1:2246696/1‑101 (MQ=9)


                                                                      ttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGa                 >  1:5586325/1‑101 (MQ=9)


                                                                      ttCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGa                 >  2:2376844/1‑101 (MQ=9)


                                                                       tCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGAt                >  1:6019347/1‑101 (MQ=9)


                                                                       tCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGAt                >  2:3274307/1‑101 (MQ=9)


                                                                        cATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATc               <  2:5961503/101‑1 (MQ=9)


                                                                        cATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATc               <  2:3545373/101‑1 (MQ=9)


                                                                         aTCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCa              >  2:6408423/1‑101 (MQ=9)


                                                                         aTCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCa              >  1:4419056/1‑101 (MQ=9)


                                                                         aTCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCa              >  2:7245863/1‑101 (MQ=9)


                                                                          tCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAg             <  2:5721480/101‑1 (MQ=9)


                                                                          tCTTGCTTCAAATAGCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAg             <  2:1168776/101‑1 (MQ=9)


                                                                           cTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGCTCacc            >  2:249666/1‑99 (MQ=9)


                                                                           cTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGa            >  1:6069929/1‑101 (MQ=9)


                                                                            ttGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGAc           >  1:4615642/1‑101 (MQ=9)


                                                                            ttGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGAc           >  2:6970561/1‑101 (MQ=9)


                                                                             tGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACt          >  2:2037564/1‑101 (MQ=9)


                                                                             tGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACt          >  1:2263185/1‑101 (MQ=9)


                                                                             tGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCCCCATCGCCAAGGCCGCGATCAGAcg          >  2:2991054/1‑100 (MQ=9)


                                                                              gCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACtg         >  1:6478593/1‑101 (MQ=12)


                                                                               cTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCGCCCATCTTCGCCCCCATCGTCAAGGCCGCGATCAGACtga        >  1:2284113/1‑100 (MQ=9)


                                                                                ttCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGTCGCGATCAGACtgtg       >  1:1606863/1‑101 (MQ=9)


                                                                                ttCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACtgtg       >  1:336998/1‑101 (MQ=12)


                                                                                 tCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGc      >  2:4718659/1‑101 (MQ=12)


                                                                                  cAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCg     >  1:348314/1‑101 (MQ=12)


                                                                                  cAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCg     >  1:3906547/1‑101 (MQ=12)


                                                                                  cAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCg     >  1:6722600/1‑101 (MQ=12)


                                                                                   aaaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCgg    >  2:6614033/1‑101 (MQ=12)


                                                                                   aaaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCgg    >  1:3733660/1‑101 (MQ=12)


                                                                                   aaaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCgg    >  2:7439812/1‑101 (MQ=12)


                                                                                    aaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCggg   >  2:5086691/1‑101 (MQ=12)


                                                                                    aaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCggg   >  2:4019446/1‑101 (MQ=12)


                                                                                    aaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCggg   >  1:4080757/1‑101 (MQ=12)


                                                                                    aaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCggg   >  1:5324737/1‑101 (MQ=12)


                                                                                    aaTATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCGGCGCGTCACAGC.........CG.CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCggg   >  2:8674439/1‑101 (MQ=12)


                                                                                     atatCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGc  >  2:6508891/1‑101 (MQ=12)


                                                                                     atatCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GCGCGTCACAGCCGCGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGc  >  1:7865820/1‑101 (MQ=12)


TCATGGGTCGCGATCACCTCGCGCAAGGGCGGCAGCCCGTCAATCGCAGCCAAAGCCCGTCCCCTTCCTTTTCATCTTGCTTCAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCG..........GC.........C..CGCCGCCCCCATCTTCGCCGCCATCGTCAAGGCCGCGATCAGACTGTGCGGGC  >  NC_014034/2880461‑2880635

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 30 ≤


ATCG

< 34 ≤


ATCG

< 40 ≤


ATCG