BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	392436 =	203 (0.510)	120 (0.300)	35/174	19.8	0.40	intergenic (‑84/+59)	RCAP_rcc00363/trmD	hypothetical protein/tRNA (guanine‑N1)‑methyltransferase
*	?	NC_014034	= 2330277	158 (0.340)	120 (0.300)	35/174	19.8	0.40	intergenic (+252/+60)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 282 total aligned reads displayed.


GGCCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGGG....G.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTC  >  NC_014034/2330177‑2330373


gcccccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAg                                                                                                           >  1:2738513/3‑101 (MQ=255)


 cccccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGa                                                                                                          >  1:6494911/2‑101 (MQ=255)


  ccccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAt                                                                                                         <  2:3517797/101‑1 (MQ=255)


  ccccGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAt                                                                                                         >  2:8441918/1‑101 (MQ=255)


      gCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCGCGGGCGGCTTTCACCTGGGGCCAAAGAtcccg                                                                                                     >  2:6763280/1‑101 (MQ=255)


      gCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccg                                                                                                     >  1:2542888/1‑101 (MQ=255)


       cACCCCCGGCGTATTTGCGCTAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgg                                                                                                    <  1:7208696/101‑1 (MQ=255)


       cACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgg                                                                                                    >  1:1792042/1‑101 (MQ=255)


        ccccccGGCCTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggg                                                                                                   <  2:3688078/100‑1 (MQ=255)


        aCCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggg                                                                                                   >  1:6946880/1‑101 (MQ=255)


          ccccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggg                                                                                                 >  2:7489707/1‑101 (MQ=255)


            ccGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtc                                                                                               <  2:7092300/101‑1 (MQ=255)


              ggCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCTGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccg                                                                                             <  2:5819927/101‑2 (MQ=255)


               gCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgg                                                                                            <  2:2514752/101‑3 (MQ=255)


                cGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggg                                                                                           <  1:2876681/101‑1 (MQ=255)


                cGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccggggggccggg                                                                                           >  2:2859567/1‑101 (MQ=255)


                 gTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggg                                                                                          >  1:3716220/1‑101 (MQ=255)


                  tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggggg                                                                                         >  2:2336740/1‑101 (MQ=255)


                  tATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccggggg                                                                                         >  1:2095980/1‑101 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                        <  1:8560330/101‑2 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                        >  1:8470126/1‑100 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                        >  1:7439557/1‑100 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                        >  1:2324896/1‑100 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                        >  2:5772727/1‑100 (MQ=255)


                   aTTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggc                                                                                        >  2:6517979/1‑100 (MQ=255)


                    tttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcg                                                                                       >  1:8127029/1‑99 (MQ=255)


                    tttGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcg                                                                                       >  2:7935850/1‑99 (MQ=255)


                       gccccAAGAAAAAGCCCGGGCGCTCACTCGGCGCCCCGGATCACCGGCGGCCCGTGCGTCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggag                                                                                    <  1:4224267/98‑6 (MQ=25)


                          ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGGCCGGGCGGCGTTGACCTGGGGCCAGAGAtgccgggggttcgggggcggagccc                                                                                 >  2:7804244/1‑93 (MQ=255)


                          ccAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccc                                                                                 >  2:8401778/1‑93 (MQ=255)


                           cAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagcccc                                                                                >  1:4819191/1‑92 (MQ=38)


                            aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGAtcccgggggtccgggggcggagccccc                                                                               <  1:3474955/101‑11 (MQ=38)


                            aaGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGGG....G.....cggagccccc                                                                     <  1:3005626/101‑10 (MQ=38)


                             aGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGT.CCGGGG....G.....cggagcccccg                                                                    <  1:7129085/101‑11 (MQ=38)


                                       ggggCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGcc                                                               <  1:4126093/101‑1 (MQ=25)


                                       ggggCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGcc                                                               >  1:4720193/1‑101 (MQ=25)


                                          gcgcgcATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAg                                                            <  1:7469765/101‑1 (MQ=25)


                                                aTGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCg                                                      <  1:3653335/101‑1 (MQ=25)


                                                   cGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCggggcggccc                                                   >  1:6699008/1‑93 (MQ=18)


                                                    ggggCCCCGGATCCCCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTc                                                  <  2:3829635/101‑1 (MQ=21)


                                                    ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTc                                                  <  1:8053770/101‑1 (MQ=25)


                                                    ggggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGGGGCACCGcccc                                                  >  2:2682938/1‑99 (MQ=18)


                                                     gggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGGggggccgccccc                                                 >  2:2002/1‑91 (MQ=18)


                                                     gggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCgggggcgccccc                                                 >  1:61445/1‑91 (MQ=18)


                                                      ggCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCCCgg                                                >  2:3217607/1‑101 (MQ=21)


                                                       gCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGc                                               <  2:4392016/101‑1 (MQ=25)


                                                        ccccGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCg                                              <  2:4097738/101‑1 (MQ=25)


                                                          ccGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGaa                                            <  2:7254900/101‑1 (MQ=25)


                                                            ggATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAAt                                          <  2:1226896/101‑1 (MQ=25)


                                                               tCACCGGCGGCCCGGGCGGCCTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGAGGGTCGCCGAGGCATCGCCTCGGCGAAATccc                                       <  1:5614154/101‑1 (MQ=21)


                                                                cACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCt                                      <  1:8302926/101‑1 (MQ=25)


                                                                 cccGGCGGCCGGGGCGGCTTGCACCTGGGGCCAAAGACCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCtt                                     <  2:3596803/100‑1 (MQ=18)


                                                                 cccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCtt                                     <  2:4576379/100‑1 (MQ=21)


                                                                 aCCGGCGGCCCGGGCGGCTTTCACCGGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCtt                                     <  2:8881612/101‑1 (MQ=21)


                                                                  ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTa                                    <  2:6209757/101‑1 (MQ=25)


                                                                  ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTa                                    <  1:5161404/101‑1 (MQ=25)


                                                                  ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTa                                    <  1:5315292/101‑1 (MQ=25)


                                                                  ccGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTa                                    <  2:3019951/101‑1 (MQ=25)


                                                                   cggcggCCCGGGCGGCTTTCCCCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAg                                   <  2:3114116/101‑1 (MQ=21)


                                                                   cggcggCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCCCGGGCTCGCCCCCGCGGAAAcccctct                                   >  2:7413751/1‑97 (MQ=9)


                                                                    ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGGGGCGGGGGAACGCCCCCGCGAAAACCCCTact                                  >  1:7911744/1‑99 (MQ=9)


                                                                    ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCGGCAGCGCCCCGGCGCAATCCCCTAGt                                  >  1:5037253/1‑101 (MQ=12)


                                                                    ggcggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCGGCACCGCCGCCGCGGAATCCCTTAGt                                  >  2:2049085/1‑101 (MQ=12)


                                                                      cggcCCGGGCGGCTTTCCCCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTaa                                <  2:856205/101‑1 (MQ=21)


                                                                      cggcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTaa                                <  1:8831620/101‑1 (MQ=25)


                                                                        gcCCGGGCGGCTTTCCCCTGGGGCCAAAGATCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAg                              <  1:862580/101‑1 (MQ=21)


                                                                        gcCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAg                              <  1:595603/101‑1 (MQ=25)


                                                                         tccGGGCGGTTTTCCCCGGGGGCCAAAGACCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGa                             <  1:4977675/100‑1 (MQ=18)


                                                                           cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAcc                           <  1:631406/101‑1 (MQ=25)


                                                                           cGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCCCGGCGGAAACCCCTAGTAAAGaac                           >  1:1506806/1‑99 (MQ=16)


                                                                            gggCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccg                          <  2:4944860/101‑1 (MQ=25)


                                                                              gcggcTTTCACCTGGGGCCAAAGATCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccgcc                        <  1:2646263/101‑1 (MQ=25)


                                                                              gcggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGCGGCAGCGCCTCGGCGACAACCCTTAGTTAACAccggc                        >  2:2600063/1‑99 (MQ=12)


                                                                              gcgccTTCCCCCGGGGGCAAAAGA.CCCGGGGGGCCCGGGG....GCGGACCCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccgcc                        <  1:3250187/101‑1 (MQ=16)


                                                                               cggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccgccc                       <  2:2095918/101‑1 (MQ=25)


                                                                                ggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGGAGCGCCCCGCCGGAATCCCTTTGTTAAGaaacgccc                      >  1:2001755/1‑94 (MQ=9)


                                                                                ggcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCCGGGGCTCGCCCCCGCGAAAACCCTTTGTAAAAAacgcccg                      >  1:762407/1‑101 (MQ=2)


                                                                                 gcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGAccgcccgc                     <  2:2399711/101‑1 (MQ=25)


                                                                                 gcTTTCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGCCGCCGCGGGATCGCCCCCGCGCAACCCCTTATTAAAAAacgccccc                     >  2:5967935/1‑99 (MQ=9)


                                                                                   tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCgg                   <  2:5072637/101‑1 (MQ=21)


                                                                                   tttCACCTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCCCGGCGAAAACCCCTAGTAAAGACCGCCCGCgg                   >  1:1605223/1‑101 (MQ=18)


                                                                                     cacgcTGGTGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGGCTCGCCTCGGCGGAATCCCCTTGTAAAAAACGCCCCCgggc                 >  2:4054157/5‑99 (MQ=2)


                                                                                        ccTGGGGCCAAAGACCCGGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAgg              <  1:3357333/101‑1 (MQ=21)


                                                                                         cTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAggg             <  1:932724/101‑1 (MQ=21)


                                                                                         cTGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCCCCGCGAAAACCCCTCGTAAAGAACGCCCCCGGACAggg             >  2:5571052/1‑101 (MQ=12)


                                                                                          tGGGGCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGGGGGATCGCCCCCGCGGAAACCCTTTGTAAAAACCGCCCCCCGGCAgggg            >  1:1030172/1‑100 (MQ=2)


                                                                                           ggggCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGAt           <  2:631264/101‑1 (MQ=21)


                                                                                           ggggCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGGGCCGGGGGATCGCCTCCGCGGAATCCCCTCGTAAAAAACGCCCGCCGACCggggg           >  1:547219/1‑99 (MQ=2)


                                                                                            ggcccAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATc          <  2:1800591/98‑1 (MQ=21)


                                                                                             ggCCAAGGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATcc         <  2:1072188/101‑1 (MQ=21)


                                                                                              gCCAAAGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCg        <  1:3913409/101‑1 (MQ=21)


                                                                                                cAAAGATCCCGGGGGTCGGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGaa      <  2:7300537/101‑1 (MQ=21)


                                                                                                 aaaGATCCCGGGGGTCGGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAg     <  2:4452820/101‑1 (MQ=21)


                                                                                                 aaaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCTGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAg     <  1:4562716/101‑1 (MQ=21)


                                                                                                 aaaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAg     <  2:4819042/101‑1 (MQ=21)


                                                                                                 aaaGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAg     <  2:1662097/101‑1 (MQ=21)


                                                                                                   aGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCTCCGCGAAAACCCCTCGTAAAGACCGCCCGCGGGCAGGGAGCCGCAggg   >  2:3369173/1‑100 (MQ=12)


                                                                                                   aGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCACCGCCCCCGCGCAAACCCCTTGTAAAAACCGCCCGCGGACACGGATCCGAAggg   >  2:1021932/1‑100 (MQ=9)


                                                                                                   aGATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCCGGGCATCGCCCCGGGGAAAACCCTTTGTAAAAACCGCCCGCGGGCAGGGAACCGaaagg   >  1:1156002/1‑98 (MQ=9)


                                                                                                    gATCCCGGGGGTCCGGGGGCGGAG.....CCCCCGGCGGGGCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAAACCGCCCGCGGGCAGGGAGCCGaaaggc  >  2:6858055/1‑97 (MQ=16)


GGCCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGGCGGCCCGGGCGGCTTTCACCTGGGGCCAAAGATCCCGGGGGTCCCGGGG....G.....CCCCCGGCGGGTCGCCGAGGCATCGCCTCGGCGAAATCCCTTAGTAAAGACCGCCCGCGGACAGGGATCCGAAGGTC  >  NC_014034/2330177‑2330373

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG