BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 440018	403 (0.970)	89 (0.210)	9/182	34.1	0.22	intergenic (+53/+3)	RCAP_rcc00411/RCAP_rcc00412	S58 family peptidase/arylformamidase
*	?	NC_014034	1640015 =	229 (0.500)	89 (0.210)	9/182	34.1	0.22	intergenic (+95/‑50)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 314 total aligned reads displayed.


CGATGCCTCCGGCGGGGATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGG....G....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTG  >  NC_014034/1639925‑1640115


   tGCCTCCGGCGGGGATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCCCTTccc                                                                                             >  2:6506576/1‑100 (MQ=21)


     ccgcgggcggGG.TGTTTGGGGACAAAAGAAACCCCACCCTTTT.CTTCTTCCCCAAAATAT.CCGGGGGGGCGG..G.GGGG....G....C...GGCC..CCCCCCGCCACTTCCGcc                                                                                           <  2:3158515/96‑1 (MQ=255)


     ccTCCGGCGGGGATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGcc                                                                                           >  2:6933723/1‑101 (MQ=21)


      cTCCGGCGGGGATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..CGGGGG....G....CAGGG.....CCCCCCGCCCCTTCCGccc                                                                                          >  2:591309/1‑100 (MQ=18)


       cccGGGGGGGATTTTGGGGG.AAAGATAACCCCCCTCCTTTC.CCTTTTCCCCCAAATAC.CCGGGGGGGC.C..G.GGGG....GGC..C...GCC...CCCCCCGCCACTTCCGCCAc                                                                                         <  1:6695880/100‑1 (MQ=255)


            cggGGATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGc                                                                                    >  1:5299640/1‑101 (MQ=25)


            cggGGATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGc                                                                                    >  1:7421925/1‑101 (MQ=25)


            cggGGATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGc                                                                                    >  1:7364468/1‑101 (MQ=25)


             ggggATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCa                                                                                   >  2:6194160/1‑101 (MQ=25)


             ggggATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCa                                                                                   >  1:1133889/1‑101 (MQ=25)


             ggggATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCa                                                                                   >  1:9057896/1‑101 (MQ=21)


              gggATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAg                                                                                  >  1:2845196/1‑101 (MQ=25)


                gATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                                                >  2:4843164/1‑101 (MQ=25)


                gATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                                                >  1:168487/1‑101 (MQ=25)


                gATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                                                >  1:2045590/1‑101 (MQ=25)


                gATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                                                >  1:4737266/1‑101 (MQ=25)


                  tatTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                              >  1:6583268/1‑101 (MQ=25)


                  tatTGGGGG.AAAGATAACACCCCCCCCTTT.CATCTTCCCCAAAATAC.CCGGGGGGGC.C..G.GGGG....GC...C...GCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                              <  2:3443240/101‑1 (MQ=255)


                    tttGGGG.GAAAAATAACCCCCCCCCTTTCCATCTCCCCCCAAATCC.CGGGGGGGGC.CG.G.GGGG....G....C...GCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                             <  1:7967255/101‑1 (MQ=255)


                    tttGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                            >  2:737196/1‑101 (MQ=25)


                    tttGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                            >  1:5126663/1‑101 (MQ=21)


                    tttGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                            >  1:7554290/1‑101 (MQ=25)


                    ttggggg.CAAGATGACCCCCATCCCTTT.CCTCTGCCCCAAAATAC.CCGGGGGGGC.CG.G.GGGG....G....C...GGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                                            <  2:1436375/98‑1 (MQ=255)


                     ttGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                           >  2:7194083/1‑101 (MQ=25)


                      tGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                          >  1:7116763/1‑101 (MQ=25)


                      tGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                          >  2:4662190/1‑101 (MQ=25)


                        ggg.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                                                        >  2:5716101/1‑101 (MQ=21)


                         gg.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCg                                                                       >  2:6345162/1‑101 (MQ=25)


                          g.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                                      >  2:8477234/1‑101 (MQ=25)


                            cAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                     >  1:4005176/1‑101 (MQ=25)


                             aaGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                                    >  1:3865379/1‑101 (MQ=25)


                              aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                   >  1:6840855/1‑101 (MQ=25)


                                aTGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                                 >  2:4696775/1‑101 (MQ=25)


                                 tGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGGAGCGCCCCGGCCGTTGACGa                                                                >  1:8825001/1‑101 (MQ=21)


                                 tGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                >  2:7263994/1‑101 (MQ=25)


                                 tGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                >  1:2283788/1‑101 (MQ=25)


                                 tGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa                                                                >  1:1219939/1‑101 (MQ=25)


                                  gAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                               >  2:6587686/1‑101 (MQ=25)


                                   aaaCCCCTCCCTTC.CCTCTTGCCCCAAATGC.CCCGGGGGGC.CGGG.GGGG....G....C...GCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                               <  2:6651287/101‑1 (MQ=255)


                                   aaaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                              >  2:2366500/1‑101 (MQ=25)


                                   aaaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                              >  2:9006013/1‑101 (MQ=25)


                                    acccccccccTTT.CTTC.TGCCCCAAAATG.CCCGGGGGGC.C..C.GGGG....GGC..C...GCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             <  2:2182238/94‑1 (MQ=255)


                                    aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             >  2:5143506/1‑101 (MQ=25)


                                    aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             >  2:8229702/1‑101 (MQ=25)


                                    aaCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             >  1:8759081/1‑101 (MQ=25)


                                     accccccccTTT.CCACCTGGCCCAAATTCCCCCGGGGGGC.C..G.GGGG....GCCACC...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             <  2:9049522/95‑1 (MQ=255)


                                     aCCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACNANGga                                                            >  1:4148239/1‑101 (MQ=21)


                                      cccATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                                                           >  1:5736475/1‑101 (MQ=25)


                                        cATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                                                         >  1:92267/1‑101 (MQ=25)


                                         aTCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                        >  2:8063806/1‑101 (MQ=21)


                                           cccTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc                                                      >  1:4405467/1‑101 (MQ=25)


                                           cccTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc                                                      >  2:2722669/1‑101 (MQ=25)


                                             cTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                                                    >  2:5233704/1‑101 (MQ=25)


                                              ttt.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                   >  2:4330639/1‑101 (MQ=25)


                                               tt.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                  >  1:1038152/1‑101 (MQ=25)


                                               tt.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                  >  2:3006380/1‑101 (MQ=25)


                                                t.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                 >  1:8257205/1‑101 (MQ=25)


                                                   aTCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                               >  1:6169704/1‑101 (MQ=25)


                                                   aTCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                               >  2:368406/1‑101 (MQ=25)


                                                    tCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGCAGGAGACCGCGATGTTTc                                              >  1:133382/1‑101 (MQ=25)


                                                     cctGCCCCAAAATC.CCCGGGGGGG.C..C.GGGG....GGC..C...GCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                              <  1:833962/99‑1 (MQ=255)


                                                      ttGCCCCAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                                            >  2:4485160/1‑101 (MQ=25)


                                                           ccAAATAT.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGAt                                       >  1:3561456/1‑101 (MQ=25)


                                                                atcgcccGGGGGGC.C..C.GGGG....GCCC.C...GCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                                    <  2:3628555/97‑1 (MQ=255)


                                                                aacgcgcGGGGGGC.C..C.GGGG....G....C...GCACCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCTCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                                    <  2:4367386/95‑1 (MQ=255)


                                                                 at.CCCGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                                 >  2:6823338/1‑101 (MQ=37)


                                                                    cccGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg                               >  2:6096267/1‑101 (MQ=37)


                                                                      cGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                             >  2:4604251/1‑101 (MQ=37)


                                                                      cGGGGGGC.C..C.GGGGGGCAG....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                             >  2:1786101/1‑101 (MQ=37)


                                                                                  ccggggggcag....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGc                     >  1:569194/11‑101 (MQ=255)


                                                                                    ggggggcag....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  2:8860917/9‑101 (MQ=255)


                                                                                    ggggggcag....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  2:5499570/9‑101 (MQ=255)


                                                                                     gggggcag....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                  >  2:7477829/8‑101 (MQ=255)


                                                                                     gggggcag....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                  >  1:5511059/8‑101 (MQ=255)


                                                                                      ggggcag....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag                 >  1:6809132/7‑101 (MQ=255)


                                                                                         gcag....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc              >  1:7663735/4‑101 (MQ=255)


                                                                                          cag....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             >  2:335136/3‑101 (MQ=255)


                                                                                            g....c...g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGcc           >  2:2792071/1‑101 (MQ=255)


                                                                                                  ggccccccccccccgGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag                 <  1:3411034/92‑1 (MQ=255)


                                                                                                    gagcgccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt               <  2:1089971/94‑1 (MQ=255)


                                                                                                    ccccccccccccgGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt               <  1:3095621/94‑1 (MQ=255)


                                                                                                     gcccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc              <  1:2966025/95‑1 (MQ=255)


                                                                                                     g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg         >  2:8819130/1‑101 (MQ=255)


                                                                                                     g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg         >  2:5745926/1‑101 (MQ=255)


                                                                                                      cgcccccacccGCCTCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             <  1:3711392/93‑1 (MQ=255)


                                                                                                      ccgccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             <  1:8555404/96‑1 (MQ=255)


                                                                                                       ccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc            <  1:9033620/97‑1 (MQ=255)


                                                                                                         ccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAACAGATCCTGATCGCCAACAGGGCCGAGATCGCCt          <  1:6460931/99‑1 (MQ=255)


                                                                                                          ccccccgGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg         <  2:7848986/100‑1 (MQ=255)


                                                                                                           ccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt        >  1:1862988/1‑101 (MQ=255)


                                                                                                           ccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt        <  2:2066519/101‑1 (MQ=255)


                                                                                                            cccccGCCACTTCCGCCNCGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc       <  2:4148120/101‑1 (MQ=255)


                                                                                                             ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg      <  2:3865270/101‑1 (MQ=255)


                                                                                                             ccccGCCACTTCCGCCACGGCGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg      <  1:7242480/101‑1 (MQ=255)


                                                                                                              cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg     >  1:5923049/1‑101 (MQ=255)


                                                                                                               ccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCggg    <  2:6242485/101‑1 (MQ=255)


                                                                                                                cGCCCCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt   <  1:2558654/101‑1 (MQ=255)


                                                                                                                 gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg  <  1:4622582/101‑1 (MQ=255)


                                                                                                                 gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg  >  1:1444863/1‑101 (MQ=255)


                                                                                                                 gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg  <  2:5458480/101‑1 (MQ=255)


CGATGCCTCCGGCGGGGATATTTGGGG.CAAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGC.C..C.GGGG....G....C...G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTG  >  NC_014034/1639925‑1640115

Base quality scores:


ATCG

< 3 ≤


ATCG

< 23 ≤


ATCG

< 31 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG