BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 456144	485 (1.080)	102 (0.230)	9/196	35.5	0.25	intergenic (+99/+7)	RCAP_rcc00426/panC	hypothetical protein/pantoate‑‑beta‑alanine ligase
*	?	NC_014034	= 2330173	142 (0.310)	102 (0.230)	9/196	35.5	0.25	intergenic (+148/+164)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 200 total aligned reads displayed.


TTCGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......CGG....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACCGG  >  NC_014034/2330073‑2330246


ttCGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCggg                                                                                          >  2:5613947/1‑101 (MQ=255)


ttCGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCggg                                                                                          <  1:4749572/101‑1 (MQ=255)


ttCGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCggg                                                                                          >  2:3856944/1‑101 (MQ=255)


 tCGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgc                                                                                         <  1:7032958/101‑1 (MQ=255)


 tCGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgc                                                                                         <  1:9028766/101‑1 (MQ=255)


   ggCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgccg                                                                                       >  1:1971110/1‑99 (MQ=255)


   ggCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgc...gg                                                                                    <  1:4525600/101‑2 (MQ=255)


   ggCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgc...gg                                                                                    >  2:7910902/1‑100 (MQ=255)


   ggCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgc...gg                                                                                    >  1:6659054/1‑100 (MQ=255)


   ggCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgc...gg                                                                                    >  1:8081452/1‑100 (MQ=255)


    gCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGgc...ggg                                                                                   >  1:1800644/1‑99 (MQ=255)


     gttGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggg                                                                           <  2:8223328/100‑1 (MQ=255)


     cTTGTCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggg                                                                           <  2:2397268/101‑1 (MQ=255)


     cTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggg                                                                           <  1:6937821/101‑1 (MQ=255)


      ttGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Gggg                                                                          <  1:6332450/101‑2 (MQ=255)


       tGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggc                                                                         <  2:8317481/101‑3 (MQ=255)


       tGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGCC...G.......Cgggg                                                                         >  1:7759315/1‑99 (MQ=255)


        ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Gggggg                                                                        >  1:8501442/1‑98 (MQ=255)


        ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggct                                                                        <  1:8159284/101‑4 (MQ=255)


         gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctc                                                                       <  2:7075133/101‑5 (MQ=255)


         gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctc                                                                       <  1:4140367/101‑5 (MQ=255)


         gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctc                                                                       <  2:8853512/101‑5 (MQ=255)


          ccTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctcc                                                                      <  1:7270785/101‑6 (MQ=255)


          ccTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctcc                                                                      <  2:1165417/101‑6 (MQ=255)


          ccTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctcc                                                                      <  2:3619556/101‑6 (MQ=255)


             ccGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctccgcc                                                                   <  1:9048058/101‑9 (MQ=255)


             ccGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctccgcc                                                                   <  1:2389370/101‑9 (MQ=255)


              cGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctccgccc                                                                  <  2:1407642/101‑10 (MQ=38)


               gCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......Ggggctccgcccc                                                                 <  2:6895057/101‑11 (MQ=37)


                   aGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......GGG....GCTCCCCccccccc                                                         >  1:3512954/1‑99 (MQ=37)


                                   gcAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTgc                                                >  1:9107623/1‑101 (MQ=18)


                                   gcAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTgc                                                >  2:3005528/1‑101 (MQ=18)


                                     agagCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGGTCCGC....CCCCGCACCCCCGGCGTATTTgcgc                                              >  1:7394452/1‑101 (MQ=21)


                                         cgccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAg                                          <  2:8672642/101‑1 (MQ=18)


                                           ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  2:6086929/101‑1 (MQ=18)


                                           ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  2:7548481/101‑1 (MQ=18)


                                           ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  1:487212/101‑1 (MQ=18)


                                           ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                        <  2:2919808/101‑1 (MQ=18)


                                            cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                       <  1:6906482/101‑1 (MQ=18)


                                            cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                       <  2:4738162/101‑1 (MQ=18)


                                             gccgggATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTA.TTGCGCCAAGaaaaa                                     <  2:4358014/97‑1 (MQ=12)


                                              cACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaaaa                                     <  1:6726000/101‑1 (MQ=17)


                                              cACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaaaa                                     <  1:2247517/101‑1 (MQ=17)


                                                  gATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCg                                 >  2:2056584/1‑101 (MQ=17)


                                                  gATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCg                                 >  2:1456266/1‑101 (MQ=17)


                                                   aTCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCgg                                >  1:8232122/1‑101 (MQ=17)


                                                    tCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCggg                               <  1:8533187/101‑1 (MQ=18)


                                                     cGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCgggg                              <  1:3198045/101‑1 (MQ=17)


                                                     cGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTGGCGCCAAGAAAAAGCCgggg                              >  1:5637666/1‑101 (MQ=17)


                                                      ggCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgc                             <  2:3926340/101‑1 (MQ=17)


                                                         cGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcg                          >  2:1664474/1‑101 (MQ=17)


                                                         cGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcg                          >  2:6432431/1‑101 (MQ=17)


                                                         cGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCCGCGCATTTGCGCCAAGAAAAAGCCGGGgcgcg                          >  2:5934510/1‑101 (MQ=12)


                                                          gATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcgc                         >  2:1913684/1‑101 (MQ=17)


                                                           aTGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCa                        >  1:3918868/1‑101 (MQ=17)


                                                           aTGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCCGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcgcg                        >  1:4442016/1‑100 (MQ=17)


                                                            tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                       <  2:1570646/101‑1 (MQ=17)


                                                            tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                       <  2:7758982/101‑1 (MQ=17)


                                                            tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                       <  2:3369455/101‑1 (MQ=17)


                                                            tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGGATTTGCGCCCAGAAAAAGCCGGGGCGGGCag                       >  2:4125974/1‑100 (MQ=12)


                                                            tGGCGGACAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                       <  2:6551658/101‑1 (MQ=17)


                                                             ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      <  1:75047/101‑1 (MQ=17)


                                                             ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                      >  1:3389855/1‑101 (MQ=17)


                                                              gCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGc                     <  1:2186152/101‑1 (MQ=18)


                                                              gCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGc                     <  2:87974/101‑1 (MQ=18)


                                                               cGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.g                   >  1:2702046/1‑101 (MQ=17)


                                                                ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.gg                  >  1:841438/1‑101 (MQ=17)


                                                                ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.gg                  <  1:1643072/101‑1 (MQ=17)


                                                                ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAACCGGGGCGCGCATGC.gg                  >  1:1918111/1‑101 (MQ=14)


                                                                 gagaGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.ggg                 >  1:7329465/1‑101 (MQ=17)


                                                                  agagGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGGTCCGC....CCCCCCAACCCCCGCGGATTTGCGCCAAAAAAAAGCCGGGGCGCGCATGC.gggg                >  1:2514825/1‑101 (MQ=12)


                                                                  agagGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.gggg                <  1:2773796/101‑1 (MQ=18)


                                                                      gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcccc            <  2:6658794/101‑1 (MQ=17)


                                                                      gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcccc            <  2:5224707/101‑1 (MQ=17)


                                                                      gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGcccc            <  1:1224810/101‑1 (MQ=17)


                                                                       aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCg           <  1:5536594/101‑1 (MQ=17)


                                                                       aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCg           >  1:5072806/1‑101 (MQ=17)


                                                                       aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCg           <  2:9046953/101‑1 (MQ=17)


                                                                        aTTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCgg          >  1:856218/1‑101 (MQ=17)


                                                                        aTTTCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCgg          <  2:2193900/101‑1 (MQ=17)


                                                                         tttCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGa         <  1:1056804/101‑1 (MQ=17)


                                                                         tttCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGa         >  2:5433419/1‑101 (MQ=17)


                                                                          ttCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGGTCCGC....CCCCGCACCCCCCGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGGCCCCggc         >  2:7208392/1‑100 (MQ=16)


                                                                          ttCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGAt        >  1:4012579/1‑101 (MQ=17)


                                                                          ttCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGAt        <  1:4367435/101‑1 (MQ=18)


                                                                          ttCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCACGC.GGGGTCCCGGac        >  1:5967520/1‑100 (MQ=9)


                                                                          ttCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGA....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGAt        <  1:7531668/101‑1 (MQ=21)


                                                                           tCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATc       <  1:1279434/101‑1 (MQ=18)


                                                                           tCGCCGCGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATc       >  2:3649355/1‑101 (MQ=18)


                                                                            cgccgcGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCa      <  2:5683662/101‑1 (MQ=18)


                                                                            cgccgcGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCa      >  2:5315108/1‑101 (MQ=18)


                                                                            cgccgcGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCa      >  1:2282638/1‑101 (MQ=18)


                                                                             gccgcGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCAc     <  2:7144813/101‑1 (MQ=18)


                                                                              ccgcGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCAcc    <  1:8972661/101‑1 (MQ=18)


                                                                              ccgcGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCAcc    <  2:7805923/101‑1 (MQ=18)


                                                                              ccgcGCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCAcc    <  2:1410211/101‑1 (MQ=18)


                                                                               cgcgCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCCCcg   >  1:2778332/1‑101 (MQ=17)


                                                                               cgcgCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACcg   <  2:7126351/101‑1 (MQ=18)


                                                                               cgcgCAGGCGCGGCGACCCGGGC...GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACcg   <  1:2854385/101‑1 (MQ=18)


                                                                                gcgcAGGCGCGGCGACCCGGGCGGGG.......CGGCCCCCCCCGCACCCCCCGCGGATTTTGGCCAAGAAAAAGGCGGGGGGCGCACGG.GGGGGCCCggcgcccccc  >  1:5927470/1‑93 (MQ=255)


TTCGGCTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC...G.......CGG....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGC.GGGGCCCCGGATCACCGG  >  NC_014034/2330073‑2330246

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG